Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0817600-03
CDS Infomation

cds chromosome:IRGSP-1.0:2:35073455:35075761:-1 gene:Os02g0817600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IAA10 description:AUX/IAA protein family protein. (Os02t0817600-01);Similar to Auxin-responsive protein IAA10. (Os02t0817600-02);AUX/IAA protein family protein. (Os02t0817600-03)
Sequence

ATGAGAGGAGGAGTAGCTGGGCCCACCGCCGGCGAGCCGCCGGGGACGGAGGCGGAGGCG
GAGGAGGTGGAGGAGAGCTCAGCTGGGGACGACGAGGAGCTGGAGCTCGGGCTCAGCCTT
GGCTCCAAGAAACAGCAGCAGCAGCAGCATGCGCCGTGCCGAATCCTGACGGCCAGGGAC
CTGCAGCCGGCGGCGGCGCTGTCACCGGACTCCTCCGTGTCGTCGTCATCCCCCGCGGCG
GCGGCGGCGGCGGGGGGGAAGAGGGCTGAGGGCCCCACCGCCACCACCTCGCCTGGGACG
GTTGCTTCCGGCCATCCACACAGCTTTGGAGTGGTGGGATGGCCACCGATCCGACAGTTC
AGGATGAACAGCCTGTTCAATCAGGCTAAAGAAAACACATCTGAAACCGACACCAAGAAG
ACCGCCACCAATGAATCTGATGTGCAGAAGGACAAGGAGGAGGGCGAAAAGAAAGGACGG
GTTGCTGGATGGGTGAAGGTGAACATGGATGGAGAGGTCATTGGAAGGAAGGTGGATCTC
AATGCGCACCGCTCATACAAGACCCTTGCATTAGCCCTTGAACTCATGTTCACGAAGCCG
TCCATTGGCCTTTGCGCTTCTCATAATACAAACTCGCTGAAACTACTAGACAACTCTGCC
GAATACCAGCTCACCTACGAGGACAGGGATGGTGACTGGATGCTCGTTGGAGATGTTCCT
TGGGAAATGTTTGTCAGCTCTGTGAAGAGGTTGAGGATCATGAGGACATCAGATGCGAAT
GGTCTTGGTCAGCGATACCAGGGAATTCACAGAACCATTGCTTCAACAAGAGGCAGATCC
TGA

Peptide Sequence

PEP ID

Os02t0817600-03
PEP Infomation

pep chromosome:IRGSP-1.0:2:35073455:35075761:-1 gene:Os02g0817600 transcript:Os02t0817600-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IAA10 description:AUX/IAA protein family protein. (Os02t0817600-01);Similar to Auxin-responsive protein IAA10. (Os02t0817600-02);AUX/IAA protein family protein. (Os02t0817600-03)
Sequence

MRGGVAGPTAGEPPGTEAEAEEVEESSAGDDEELELGLSLGSKKQQQQQHAPCRILTARD
LQPAAALSPDSSVSSSSPAAAAAAGGKRAEGPTATTSPGTVASGHPHSFGVVGWPPIRQF
RMNSLFNQAKENTSETDTKKTATNESDVQKDKEEGEKKGRVAGWVKVNMDGEVIGRKVDL
NAHRSYKTLALALELMFTKPSIGLCASHNTNSLKLLDNSAEYQLTYEDRDGDWMLVGDVP
WEMFVSSVKRLRIMRTSDANGLGQRYQGIHRTIASTRGRS

Transcript Sequence

Transcript ID

Os02t0817600-03
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:35073455:35075761:-1 gene:Os02g0817600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IAA10 description:AUX/IAA protein family protein. (Os02t0817600-01);Similar to Auxin-responsive protein IAA10. (Os02t0817600-02);AUX/IAA protein family protein. (Os02t0817600-03)
Sequence

CTCGAGGCCCAGGTGTTCGTCCGTGTCCTCTTCTCCACTCCACACACGCACACGCACAAG
CCAAGCAGCAAGCAGCGGCGCCGATGAGAGGAGGAGTAGCTGGGCCCACCGCCGGCGAGC
CGCCGGGGACGGAGGCGGAGGCGGAGGAGGTGGAGGAGAGCTCAGCTGGGGACGACGAGG
AGCTGGAGCTCGGGCTCAGCCTTGGCTCCAAGAAACAGCAGCAGCAGCAGCATGCGCCGT
GCCGAATCCTGACGGCCAGGGACCTGCAGCCGGCGGCGGCGCTGTCACCGGACTCCTCCG
TGTCGTCGTCATCCCCCGCGGCGGCGGCGGCGGCGGGGGGGAAGAGGGCTGAGGGCCCCA
CCGCCACCACCTCGCCTGGGACGGTTGCTTCCGGCCATCCACACAGCTTTGGAGTGGTGG
GATGGCCACCGATCCGACAGTTCAGGATGAACAGCCTGTTCAATCAGGCTAAAGAAAACA
CATCTGAAACCGACACCAAGAAGACCGCCACCAATGAATCTGATGTGCAGAAGGACAAGG
AGGAGGGCGAAAAGAAAGGACGGGTTGCTGGATGGGTGAAGGTGAACATGGATGGAGAGG
TCATTGGAAGGAAGGTGGATCTCAATGCGCACCGCTCATACAAGACCCTTGCATTAGCCC
TTGAACTCATGTTCACGAAGCCGTCCATTGGCCTTTGCGCTTCTCATAATACAAACTCGC
TGAAACTACTAGACAACTCTGCCGAATACCAGCTCACCTACGAGGACAGGGATGGTGACT
GGATGCTCGTTGGAGATGTTCCTTGGGAAATGTTTGTCAGCTCTGTGAAGAGGTTGAGGA
TCATGAGGACATCAGATGCGAATGGTCTTGGTCAGCGATACCAGGGAATTCACAGAACCA
TTGCTTCAACAAGAGGCAGATCCTGAGAGCGTGTGACAAGGAAAAGAGCTATACCGCTGG
TGAAGCTTGGAGCGTGCTTGATGGTTAATTACTTGTCCAGTTAAAATAGCAGAAGGCTAG
TAAGAAAGAGCCACAGGGCTCACCCGGTTCTGTTATATTTTTGCCTTTGTGGTGCCTGTT
TTTGTTTGCACTGTCGATCTGCAAGAGCATATGGTCGCCTTGCTCTGCTTGCATGTACAA
GTATGTCTTTCTAGTAGTTTTTATGGTGTTTGATG