Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0815200-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:34922504:34924759:1 gene:Os02g0815200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 29 kDa ribonucleoprotein, chloroplast precursor (RNA-binding protein cp29). (Os02t0815200-01)
Sequence	ATGGCCAACTCCAGCTGCCCCTCCACCTCTCCCGCCGCGCTACGCCTCGCGCGCCCCAAG CTCCCGGACTCCGCCATGATCATGCAGCTCCAGCTCCAGCTCCAGCACGCGCCCCTGTTC CCCCGCCCGCCCGCGGCGCGCGCGCACCACCACCACCACCACCAGCGACGCCTCCTGCTC GCGGTCTCCGACCACGTCGCCGCCAAGCCCGTCACCGTGCCGGTGGGGAGGATGCGCATG CGCGCGGCGACGGCGATGGTCTCGCAGGAGGAGGCCGCGGCCACGGCTGTGGAGGAGCAA CAGGAGGAGGAGGTCGAAGAGGAGCAGTTGCAAGAGGAAGACGGAGCAGCTGTGCAGGAG GAGGAGCAGGGCGGCGTCCTGGAGGGCAGCTCGGGCGGCGGCGAGGCGGAGGCGGAGGCA GCGGGCATCACCACCAAGCTCTACTTCGGGAACCTGCCGTACAACTGCGACAGCGCGCAG CTCGCCGGCATTGTGCAGGACTACGCCACCCCGGAGATGGTGGAGGTGTTGTACGATCGG GCGACAGGGAGGAGCCGAGGCTTCGCGTTCGTGACGATGAGCACCATCGAAGACTGCGAG CAAGTGATCAAGAACCTCGACGGCAGCCTGTACAGTGGGCGCACGATGAGGGTGAACTTC GCGGACAAGCCCAAGCCGAAGCTGCCGCTGTACCCGGAGACTGAGCACAAGCTGTTCGTC GGCAACCTGTCGTGGACGGTCACCTCGGAGATGCTGACGGAGATGTTCCAGAAGTGCGGC AACGTGGTCGGCGCCCGGGTGCTCTACGACGGCGAGACCGGCCGGTCCCGTGGCTACGGC TTCGTCTGCTACTCCACCAAGGAGGAGATGGATGAAGCTCTTTCCTCGCTCAATGGAACG GAACTAGAAGGCAGGGAGATCCGGGTCAACCTCGCCCTTGGAAAGAAATAA

Peptide Sequence

PEP ID	Os02t0815200-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:34922504:34924759:1 gene:Os02g0815200 transcript:Os02t0815200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 29 kDa ribonucleoprotein, chloroplast precursor (RNA-binding protein cp29). (Os02t0815200-01)
Sequence	MANSSCPSTSPAALRLARPKLPDSAMIMQLQLQLQHAPLFPRPPAARAHHHHHHQRRLLL AVSDHVAAKPVTVPVGRMRMRAATAMVSQEEAAATAVEEQQEEEVEEEQLQEEDGAAVQE EEQGGVLEGSSGGGEAEAEAAGITTKLYFGNLPYNCDSAQLAGIVQDYATPEMVEVLYDR ATGRSRGFAFVTMSTIEDCEQVIKNLDGSLYSGRTMRVNFADKPKPKLPLYPETEHKLFV GNLSWTVTSEMLTEMFQKCGNVVGARVLYDGETGRSRGYGFVCYSTKEEMDEALSSLNGT ELEGREIRVNLALGKK

Transcript Sequence

Transcript ID	Os02t0815200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:34922504:34924759:1 gene:Os02g0815200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 29 kDa ribonucleoprotein, chloroplast precursor (RNA-binding protein cp29). (Os02t0815200-01)
Sequence	GGCCTCGCGCCCCTCCACATCACACACACGACGCCATCGCCATGGCCAACTCCAGCTGCC CCTCCACCTCTCCCGCCGCGCTACGCCTCGCGCGCCCCAAGCTCCCGGACTCCGCCATGA TCATGCAGCTCCAGCTCCAGCTCCAGCACGCGCCCCTGTTCCCCCGCCCGCCCGCGGCGC GCGCGCACCACCACCACCACCACCAGCGACGCCTCCTGCTCGCGGTCTCCGACCACGTCG CCGCCAAGCCCGTCACCGTGCCGGTGGGGAGGATGCGCATGCGCGCGGCGACGGCGATGG TCTCGCAGGAGGAGGCCGCGGCCACGGCTGTGGAGGAGCAACAGGAGGAGGAGGTCGAAG AGGAGCAGTTGCAAGAGGAAGACGGAGCAGCTGTGCAGGAGGAGGAGCAGGGCGGCGTCC TGGAGGGCAGCTCGGGCGGCGGCGAGGCGGAGGCGGAGGCAGCGGGCATCACCACCAAGC TCTACTTCGGGAACCTGCCGTACAACTGCGACAGCGCGCAGCTCGCCGGCATTGTGCAGG ACTACGCCACCCCGGAGATGGTGGAGGTGTTGTACGATCGGGCGACAGGGAGGAGCCGAG GCTTCGCGTTCGTGACGATGAGCACCATCGAAGACTGCGAGCAAGTGATCAAGAACCTCG ACGGCAGCCTGTACAGTGGGCGCACGATGAGGGTGAACTTCGCGGACAAGCCCAAGCCGA AGCTGCCGCTGTACCCGGAGACTGAGCACAAGCTGTTCGTCGGCAACCTGTCGTGGACGG TCACCTCGGAGATGCTGACGGAGATGTTCCAGAAGTGCGGCAACGTGGTCGGCGCCCGGG TGCTCTACGACGGCGAGACCGGCCGGTCCCGTGGCTACGGCTTCGTCTGCTACTCCACCA AGGAGGAGATGGATGAAGCTCTTTCCTCGCTCAATGGAACGGAACTAGAAGGCAGGGAGA TCCGGGTCAACCTCGCCCTTGGAAAGAAATAATCAAAGAGTAATAGATTTACTTCACATG CACAGGAGAAACTTGCAATACAATGCAATGCTGCCTTCAGATGCGATTTTCAGGCAACCA TGGATGCAGCGATTACTTGTTTGAGCGCATCGCAAGACGGCAAGAGCAGGCACAGGAAGA ATGTATTGTTCTGAGTTACAGCAGATGTATCTCTTTTTTTTAACGAATCAGATGTATCTT TTGTATGCATGGGAAATTTATTAGTTTCTATCAGTCGTTTATCTGATAGAAGCTTGACTG AACATTGAACAGTTTTAGTCTGCTGGGGTTATCAGTCAGTTCCATTCTCTTGGAGCTGCA TTTTTTCAGTC