Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0814600-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:34907672:34910812:-1 gene:Os02g0814600 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF-HAND 1 domain containing protein. (Os02t0814600-01)
Sequence

ATGGGGTGGGCGCACGAGACGGTGGCCATGGAGGAGTTGCTCGGCTTGGTGCGGGGCTTC
GTCGACGTCCTCGTCCTCGCCGGCGGCCGCACCTCGTCTGGCGCCGCCGCCACCTGGCGC
TCCGGTGACGTCAAGAAGGCCCTCCAATGGGCCCTCTTCTTCGAGGAGGTTTTCAAGAAC
CTGCGTGACGATGGTCAGTACGATGAGTCTGCAAGTGAGCTCGATGCTGCACTCGTTCAA
CTCGCTTCAAGCCCGAATTTCCCCAAGGGTATTGAGGATATCCGATCAAAAACACTTGCG
ATGGCAAGAGAGTTGGTTGTGAAGCATTTTCTGAAAACAACGAATGCGGAGAATTTAGGT
GCTGTACTTCAAGCAGTTGTTGAGATGGATATGGATGGCATTTCTGCTAGTGGTGAATGC
AATGTGTGCCAAGAGTATGTGCAATCGATTTTAGATATGAATTTACCTAGTTTGATGCGA
ACCAAGAATGCCCGTGATGTTGGACATTCCACTAGCTCTGATGAATTTTGTGAAGAATCC
TTGTTTACGGGTAATTCACAGATTCTACTTAAAGAACTACAGAAGAAGCTGGATTCAGGA
TCGTGTATTTCTTTGGCTGAGAGAGAACTGAACACACTTCTAAAAAGCATGAAAAAGGAC
AGCTTTGATAGTGCAGGAAGTACATTGTGCACCTCAGCAACTGCTCAGAAAACACAAATC
ATCGACAAGTTTATCCTGTGGAAGCAATGGAAAGCAAAGTGTTTGTCGTACTTGCTTGAT
GAGCGTACCATTCGGATCATGTCAGGAACTAATATGATCTTTAATGCTCCCAAGGAGCAG
TGGATGGGATTGTTTGAACCATTAAAAGTTTCTGCAGATTCTAGTCAAAGTGGCATCATT
GAAGTCATGGAGCTATGCTTGTTGGGATTGGTTGCAAGGCAATGGAACTCATTAATAGAG
AGCATCATGTCACATACTTTTAGTTCCTTTCCTATATCAAAACAATATGCTGATCTGCAC
CAGTTGCTTCAAGGAACAACTCAGGATGAATGCCAAGACAAGCTTCTTGGTTTCAAGGAG
ATGGATATTTGTGAGTATGCAAGGCAATCATTAGAGAGCGAACCGTACATATTATGGCTT
CTACCTCCAGTTCTTACTGCTGCAGCAATGCCGCCACGGTCAAGCTTGTTTAAGATATAC
CTTGTTGAAATAGATAAGCAACTCGGTGAAGCTGCTTCCAAAGACCGAAAATGCAATTGC
GGAGGAGATGGAATAGACCAGCATCAAAACTGTGAGATTTCTGAAAGGATTCAATGTCTC
TACACATTCCATGTTCAAAGAACTCAACTGACAATTCAGTAG

Peptide Sequence

PEP ID

Os02t0814600-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:34907672:34910812:-1 gene:Os02g0814600 transcript:Os02t0814600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF-HAND 1 domain containing protein. (Os02t0814600-01)
Sequence

MGWAHETVAMEELLGLVRGFVDVLVLAGGRTSSGAAATWRSGDVKKALQWALFFEEVFKN
LRDDGQYDESASELDAALVQLASSPNFPKGIEDIRSKTLAMARELVVKHFLKTTNAENLG
AVLQAVVEMDMDGISASGECNVCQEYVQSILDMNLPSLMRTKNARDVGHSTSSDEFCEES
LFTGNSQILLKELQKKLDSGSCISLAERELNTLLKSMKKDSFDSAGSTLCTSATAQKTQI
IDKFILWKQWKAKCLSYLLDERTIRIMSGTNMIFNAPKEQWMGLFEPLKVSADSSQSGII
EVMELCLLGLVARQWNSLIESIMSHTFSSFPISKQYADLHQLLQGTTQDECQDKLLGFKE
MDICEYARQSLESEPYILWLLPPVLTAAAMPPRSSLFKIYLVEIDKQLGEAASKDRKCNC
GGDGIDQHQNCEISERIQCLYTFHVQRTQLTIQ

Transcript Sequence

Transcript ID

Os02t0814600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:34907672:34910812:-1 gene:Os02g0814600 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF-HAND 1 domain containing protein. (Os02t0814600-01)
Sequence

GGAAGGGGATCGCAAATGGGGTGGGCGCACGAGACGGTGGCCATGGAGGAGTTGCTCGGC
TTGGTGCGGGGCTTCGTCGACGTCCTCGTCCTCGCCGGCGGCCGCACCTCGTCTGGCGCC
GCCGCCACCTGGCGCTCCGGTGACGTCAAGAAGGCCCTCCAATGGGCCCTCTTCTTCGAG
GAGGTTTTCAAGAACCTGCGTGACGATGGTCAGTACGATGAGTCTGCAAGTGAGCTCGAT
GCTGCACTCGTTCAACTCGCTTCAAGCCCGAATTTCCCCAAGGGTATTGAGGATATCCGA
TCAAAAACACTTGCGATGGCAAGAGAGTTGGTTGTGAAGCATTTTCTGAAAACAACGAAT
GCGGAGAATTTAGGTGCTGTACTTCAAGCAGTTGTTGAGATGGATATGGATGGCATTTCT
GCTAGTGGTGAATGCAATGTGTGCCAAGAGTATGTGCAATCGATTTTAGATATGAATTTA
CCTAGTTTGATGCGAACCAAGAATGCCCGTGATGTTGGACATTCCACTAGCTCTGATGAA
TTTTGTGAAGAATCCTTGTTTACGGGTAATTCACAGATTCTACTTAAAGAACTACAGAAG
AAGCTGGATTCAGGATCGTGTATTTCTTTGGCTGAGAGAGAACTGAACACACTTCTAAAA
AGCATGAAAAAGGACAGCTTTGATAGTGCAGGAAGTACATTGTGCACCTCAGCAACTGCT
CAGAAAACACAAATCATCGACAAGTTTATCCTGTGGAAGCAATGGAAAGCAAAGTGTTTG
TCGTACTTGCTTGATGAGCGTACCATTCGGATCATGTCAGGAACTAATATGATCTTTAAT
GCTCCCAAGGAGCAGTGGATGGGATTGTTTGAACCATTAAAAGTTTCTGCAGATTCTAGT
CAAAGTGGCATCATTGAAGTCATGGAGCTATGCTTGTTGGGATTGGTTGCAAGGCAATGG
AACTCATTAATAGAGAGCATCATGTCACATACTTTTAGTTCCTTTCCTATATCAAAACAA
TATGCTGATCTGCACCAGTTGCTTCAAGGAACAACTCAGGATGAATGCCAAGACAAGCTT
CTTGGTTTCAAGGAGATGGATATTTGTGAGTATGCAAGGCAATCATTAGAGAGCGAACCG
TACATATTATGGCTTCTACCTCCAGTTCTTACTGCTGCAGCAATGCCGCCACGGTCAAGC
TTGTTTAAGATATACCTTGTTGAAATAGATAAGCAACTCGGTGAAGCTGCTTCCAAAGAC
CGAAAATGCAATTGCGGAGGAGATGGAATAGACCAGCATCAAAACTGTGAGATTTCTGAA
AGGATTCAATGTCTCTACACATTCCATGTTCAAAGAACTCAACTGACAATTCAGTAGTGG
CAGTAGCCATGGGCCACAGTTCAAGACAGTGCAGGAGATTTGCAGTATGCACTGATATTT
CAGAGTAATTTATTTTCCAAACTGACCGCTGTAGTTATTTCCATGTATGATATACATTTT
TGCGTGATGGAAAATTTAGCCAGATGACACATTGACTGACAGTTCATGCAGATTGTCAAA
CTGGATATTGAATAGATTTTGCCTCT