Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0812500-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:34794245:34796635:1 gene:Os02g0812500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 115 description:Cyclin-like F-box domain containing protein. (Os02t0812500-01)
Sequence	ATGGATTGCGAGGGGGCGGCGGCGGCGGAGATCTACCGGCTGCCGGAGGAGTGCGTGGCG TACGCCATCTCGATGACGACGCCGGGCGACGCGTGCCACTCGTCGGCCGTGTCGCCGGCG TTCCGGGCCGCCGCCGACTCCGACGCCGTCTGGGACAGCTTCCTCCCCCCCGACCACGCC GCCATCCTCGCCCGCGCCGACGACGGTATCGCCGCCGCCGGCGAATGCGCCTCCAAGAAG GACCTCTTCGCCCGCCTCTGCGGCCGCCCCGTCCTCCTCGACGACGCCACCATGAGCTTT GGGTTGGATCGACGGAGCGGCGCGAAATGCGTGATGCTGTCGGCGAGGGCGCTGAGCATC GCGTGGGGAGACGATCCCTCGCGCTGGAGATGGACTCCTGGCCTCCCCGGATCAAGGTTC CCTGAGGTGGCGGAGCTCTTGGACGTGTGCTGGCTGGAGATCACCGGCAAGCTGCAGCTC TCGCTCCTCTCTCCGGCGACGACGTACGCCGCCTACCTCGTCTACTCCTTCGCCGACTAC ACCACCGGCCTCGAGTGCAACATCGGCATGCCGACTCCCATGGCCACGGTGACCGTCGTC TCCGGCGCCGGCGGGACGACGAGCAGGCCGCCGGCGGCGCCGGCGACCACGACGACGACG GAGCAGCACAAGATCTGCCTGCAGCACATGGGGGAGGAGGAGACGATCATGCACCGGCAG GAGCTGGTGATCCGCCTCCGCAAGGCCTTCGGCCGGACGGTGAGGTTCGATCCCGACATG GACATCAGGTGCCCGCGGCCGAGGGACGGCGGCGGCGGCGGCGGCGGGTGGAGGGAGGTC GAGCTGGGCGAGTTCGCTGTGCCGGCCGCCGGCGGCGAGGATGGCGTGGTGGAGGTGAGC TTCAAGGAGGAGACTGGGCGGTGGAAGACGGGGCTCATCGTGCAAGGCATCGAGCTAAGG CCCAAATGCACCAGCAAATTAATTAAACTCGATAGCTAG

Peptide Sequence

PEP ID	Os02t0812500-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:34794245:34796635:1 gene:Os02g0812500 transcript:Os02t0812500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 115 description:Cyclin-like F-box domain containing protein. (Os02t0812500-01)
Sequence	MDCEGAAAAEIYRLPEECVAYAISMTTPGDACHSSAVSPAFRAAADSDAVWDSFLPPDHA AILARADDGIAAAGECASKKDLFARLCGRPVLLDDATMSFGLDRRSGAKCVMLSARALSI AWGDDPSRWRWTPGLPGSRFPEVAELLDVCWLEITGKLQLSLLSPATTYAAYLVYSFADY TTGLECNIGMPTPMATVTVVSGAGGTTSRPPAAPATTTTTEQHKICLQHMGEEETIMHRQ ELVIRLRKAFGRTVRFDPDMDIRCPRPRDGGGGGGGWREVELGEFAVPAAGGEDGVVEVS FKEETGRWKTGLIVQGIELRPKCTSKLIKLDS

Transcript Sequence

Transcript ID	Os02t0812500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:34794245:34796635:1 gene:Os02g0812500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 115 description:Cyclin-like F-box domain containing protein. (Os02t0812500-01)
Sequence	GTACCCCGCACTCCCGCCGCCGCCGTCGTCTACGTGAGCGATCACGTCATCACATCGTCG TCGACCAAATTAACACGCGTACGTACTAGCAGCTAAGCTGTATACATACGTGCATGGATT GCGAGGGGGCGGCGGCGGCGGAGATCTACCGGCTGCCGGAGGAGTGCGTGGCGTACGCCA TCTCGATGACGACGCCGGGCGACGCGTGCCACTCGTCGGCCGTGTCGCCGGCGTTCCGGG CCGCCGCCGACTCCGACGCCGTCTGGGACAGCTTCCTCCCCCCCGACCACGCCGCCATCC TCGCCCGCGCCGACGACGGTATCGCCGCCGCCGGCGAATGCGCCTCCAAGAAGGACCTCT TCGCCCGCCTCTGCGGCCGCCCCGTCCTCCTCGACGACGCCACCATGAGCTTTGGGTTGG ATCGACGGAGCGGCGCGAAATGCGTGATGCTGTCGGCGAGGGCGCTGAGCATCGCGTGGG GAGACGATCCCTCGCGCTGGAGATGGACTCCTGGCCTCCCCGGATCAAGGTTCCCTGAGG TGGCGGAGCTCTTGGACGTGTGCTGGCTGGAGATCACCGGCAAGCTGCAGCTCTCGCTCC TCTCTCCGGCGACGACGTACGCCGCCTACCTCGTCTACTCCTTCGCCGACTACACCACCG GCCTCGAGTGCAACATCGGCATGCCGACTCCCATGGCCACGGTGACCGTCGTCTCCGGCG CCGGCGGGACGACGAGCAGGCCGCCGGCGGCGCCGGCGACCACGACGACGACGGAGCAGC ACAAGATCTGCCTGCAGCACATGGGGGAGGAGGAGACGATCATGCACCGGCAGGAGCTGG TGATCCGCCTCCGCAAGGCCTTCGGCCGGACGGTGAGGTTCGATCCCGACATGGACATCA GGTGCCCGCGGCCGAGGGACGGCGGCGGCGGCGGCGGCGGGTGGAGGGAGGTCGAGCTGG GCGAGTTCGCTGTGCCGGCCGCCGGCGGCGAGGATGGCGTGGTGGAGGTGAGCTTCAAGG AGGAGACTGGGCGGTGGAAGACGGGGCTCATCGTGCAAGGCATCGAGCTAAGGCCCAAAT GCACCAGCAAATTAATTAAACTCGATAGCTAGCTAACTCGATTATTGATCGATCATTGCA TTGCATGTAAATGTTCCTAAATTTTTTTTCCCGGGGGAGAATTCGATCGATCAGTGAGAG AGCAAACCAATAACGCATCAATTAAGCATATGTGATTGATTAAGAAGCTGCTTCAATCTG ATCATATATCAGGCTAGACGAGCATTTGATCGATCAAGCACTAGCTAGCTGCAGCTGTTT TGCGTTGTGACGTGTTAGCTTTTATGCATATGCATGTCGTTTTATCGTACATGTACACGC ATGACAGCATATAAGCATGGCTCATCTAGGTGGTGCCAGAAGCTCAGAGAGAACTTGATT GACAGTGTGCATGCTGCACGCTCGTGTCATCAGTAGTGTAGAAAGTGTTATTTGCTGTAC TCCTACAATTAATTTGTTCCGC