Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0812400-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:34784179:34793387:1 gene:Os02g0812400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Trimeric LpxA-like domain containing protein. (Os02t0812400-01)
Sequence	ATGTCGAAGAAATCACGCGGCGGGGGCGGGGGCGCCGCCGCCGGCGAGGATCCCGAGGAC CTCTCCCGCTCGCCCCTCCAGGCCGTCCTCCTCGCCGACAGCTTCACGCTCAAGTTCCGC CCCATCACCCTCGAGCGCCCCAAGGTGCTGCTGCCGCTGGTGAATGTCCCGATGATCGAG TACACGCTCTCGTGGCTGGAATCGGCGGGGGTAGAGGAGTGCTTCGTCTTCTGCTGCGCG CACGCACAGCAGGTCAAGGAGCACCTGGGGAAGGCGGGGTGGACCGGGAAGCCTGCGGCG AGGGAGATGACCGTCACGGCTGTGGAATCGCACGACGCGATCAGCGCGGGCGACGCGCTG CGCGTCATGTACGGCCGTGGAGTTATACATGGAGATTTTGTTCTAATCAGTGGTGATACC ATCAGCAACATGAATTTGAAAGACGCTCTCCAGGAACATAAGGATAGAAGGAAAAAGGAC CCACTTGCTGTCATGACTATGGTTATAAAGCATTCAAAACCTTCGATCCTAACGAACCAA ACACGGTTAGGTAATGACGAAATTGTTATGGCGATAGATCCTGAGACTAAAGAACTACTG TATTACGAGGACAGGGCAGATGTCTCAAACCTGTATGTGACAATTGATAAGGACATACTG GCCAGTAATCCTACTCTCCAATTGCATAATAACATGGAGGACTGCTATATTGATATATGC TCACCAGAAGTTCTTAGTCTTTTTACGGATAACTTTGATTACCAACATCTTCGGCGCCAT TTCGTTAAGGGTTTACTAGTTGATGATATTATGGGGTATAAAATATATACCCATGAAATA CGCTCAAGTTATGCTGCCAGAATAGATAATTTTAGGAGCTATGATACTGTGAGTAAGGAT ATAATTCAAAGGTGGACTTACCCTATGGTGCCTGATGTCCTGTCTTTCGGTGATCGTCAA GAAATCAAACTTCATCGGCAGGGAATCTATAAGGCATCAGATGTAACACTGTCACATTCT GCACAAATTGGTGCCAATTCTGTTGTTGGCAATGGGACAAGCGTTGGAGAAAACTGCAAG GTATCCAATTCAGTTATAGGACAAGGCTGCAATATTGGGAAAAATGTTTTGATTCATGGA TCCTATATATGGGACAATGTCACAATTGAAGATGGATGCAAAGTGAGTAATTCACTAGTC TGTGATGGCGTTCATTTAGGGGCAGGGGCTATTGTTGAACCTGGCTGCATACTGTCATTT AAGGTTGAAGTTGGAAAGAATGTTGTTGTTCCTGCCTATTCAAAAGTGGCATTGCTCCCT CAGCCTTCAAATGAAGACAGTGATGAGGAGCTTGAGTATGCTGACACCAATTCTGGAGTT ACAGATAGTCCACCCTTTTCCAGCATGAGGAGTGCTGACCACCCAACTGTATCTGATGAT GATGACTTAGAGGCATCGGAGACTGGAACATGTGGTGTCGTTGGTTACGTATGGGAAAAT GTTGATGCTGGAATTCAGGAAGAATGGAGACAATCAATTGCTCCAATTCCTAAAGATAAG CTTGAAGAGTTGCAGCATGCTGCGTCTTTTGATGACGATGATGATGGATCAGAAGATGAC TTTAAAAATCGGCCAACTGTACTGGACCAAGATGATGATTCTGATGTTAGCGCGGTTGAG GATGATGATTATTCTAAGTTTGAGAAAGAGGTGGAAGAGACTTTCCAAAGGGCGTTGGAT GGTATCCATCAAGATAACTTGATACTAGAAATTAATGCACTCAGGTTATCTTATAGCCTT CAACATGCAGACTGTGCTGGAGCTTTGTTCCATTCCGTTATGAGAAGTGCATTAGTGGCT GCACAATCTACTAATGGTAACCTTCTAAAGACAACTGCAGAAGCACTTGGCAAATGGAAG GACCTACTGCGAAATTACACCAAGTCAGTTGATGAGGAGATGGAAATATTATTGAAGTTC GAGGAAATGTGCCAAGAAAATACAAAAGAATTTTCTCCACTATTTTCAAAGATCTTGCCT TACCTCTATGATAAGGAGGTAGTAAGTGAAGACGCAATTTTGAGATGGGCGGAGGAGAAA GAAAATGCCGATGAATCTGATAAGGTTTTCGTCAAACAATCTGAAGCTTTCATTCAGTGG CTTAAGGAAGCTGAAGAGGAAGATGAAGAAGAGGAGTAG

Peptide Sequence

PEP ID	Os02t0812400-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:34784179:34793387:1 gene:Os02g0812400 transcript:Os02t0812400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Trimeric LpxA-like domain containing protein. (Os02t0812400-01)
Sequence	MSKKSRGGGGGAAAGEDPEDLSRSPLQAVLLADSFTLKFRPITLERPKVLLPLVNVPMIE YTLSWLESAGVEECFVFCCAHAQQVKEHLGKAGWTGKPAAREMTVTAVESHDAISAGDAL RVMYGRGVIHGDFVLISGDTISNMNLKDALQEHKDRRKKDPLAVMTMVIKHSKPSILTNQ TRLGNDEIVMAIDPETKELLYYEDRADVSNLYVTIDKDILASNPTLQLHNNMEDCYIDIC SPEVLSLFTDNFDYQHLRRHFVKGLLVDDIMGYKIYTHEIRSSYAARIDNFRSYDTVSKD IIQRWTYPMVPDVLSFGDRQEIKLHRQGIYKASDVTLSHSAQIGANSVVGNGTSVGENCK VSNSVIGQGCNIGKNVLIHGSYIWDNVTIEDGCKVSNSLVCDGVHLGAGAIVEPGCILSF KVEVGKNVVVPAYSKVALLPQPSNEDSDEELEYADTNSGVTDSPPFSSMRSADHPTVSDD DDLEASETGTCGVVGYVWENVDAGIQEEWRQSIAPIPKDKLEELQHAASFDDDDDGSEDD FKNRPTVLDQDDDSDVSAVEDDDYSKFEKEVEETFQRALDGIHQDNLILEINALRLSYSL QHADCAGALFHSVMRSALVAAQSTNGNLLKTTAEALGKWKDLLRNYTKSVDEEMEILLKF EEMCQENTKEFSPLFSKILPYLYDKEVVSEDAILRWAEEKENADESDKVFVKQSEAFIQW LKEAEEEDEEEE

Transcript Sequence

Transcript ID	Os02t0812400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:34784179:34793387:1 gene:Os02g0812400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Trimeric LpxA-like domain containing protein. (Os02t0812400-01)
Sequence	GGCGACGACGGCGCGAGCGACCCAAACCTAAACCTCCCAACCCCTCCTCCTCCGCCGCCG ACGCCGCCGCAGCTGCCATGTCGAAGAAATCACGCGGCGGGGGCGGGGGCGCCGCCGCCG GCGAGGATCCCGAGGACCTCTCCCGCTCGCCCCTCCAGGCCGTCCTCCTCGCCGACAGCT TCACGCTCAAGTTCCGCCCCATCACCCTCGAGCGCCCCAAGGTGCTGCTGCCGCTGGTGA ATGTCCCGATGATCGAGTACACGCTCTCGTGGCTGGAATCGGCGGGGGTAGAGGAGTGCT TCGTCTTCTGCTGCGCGCACGCACAGCAGGTCAAGGAGCACCTGGGGAAGGCGGGGTGGA CCGGGAAGCCTGCGGCGAGGGAGATGACCGTCACGGCTGTGGAATCGCACGACGCGATCA GCGCGGGCGACGCGCTGCGCGTCATGTACGGCCGTGGAGTTATACATGGAGATTTTGTTC TAATCAGTGGTGATACCATCAGCAACATGAATTTGAAAGACGCTCTCCAGGAACATAAGG ATAGAAGGAAAAAGGACCCACTTGCTGTCATGACTATGGTTATAAAGCATTCAAAACCTT CGATCCTAACGAACCAAACACGGTTAGGTAATGACGAAATTGTTATGGCGATAGATCCTG AGACTAAAGAACTACTGTATTACGAGGACAGGGCAGATGTCTCAAACCTGTATGTGACAA TTGATAAGGACATACTGGCCAGTAATCCTACTCTCCAATTGCATAATAACATGGAGGACT GCTATATTGATATATGCTCACCAGAAGTTCTTAGTCTTTTTACGGATAACTTTGATTACC AACATCTTCGGCGCCATTTCGTTAAGGGTTTACTAGTTGATGATATTATGGGGTATAAAA TATATACCCATGAAATACGCTCAAGTTATGCTGCCAGAATAGATAATTTTAGGAGCTATG ATACTGTGAGTAAGGATATAATTCAAAGGTGGACTTACCCTATGGTGCCTGATGTCCTGT CTTTCGGTGATCGTCAAGAAATCAAACTTCATCGGCAGGGAATCTATAAGGCATCAGATG TAACACTGTCACATTCTGCACAAATTGGTGCCAATTCTGTTGTTGGCAATGGGACAAGCG TTGGAGAAAACTGCAAGGTATCCAATTCAGTTATAGGACAAGGCTGCAATATTGGGAAAA ATGTTTTGATTCATGGATCCTATATATGGGACAATGTCACAATTGAAGATGGATGCAAAG TGAGTAATTCACTAGTCTGTGATGGCGTTCATTTAGGGGCAGGGGCTATTGTTGAACCTG GCTGCATACTGTCATTTAAGGTTGAAGTTGGAAAGAATGTTGTTGTTCCTGCCTATTCAA AAGTGGCATTGCTCCCTCAGCCTTCAAATGAAGACAGTGATGAGGAGCTTGAGTATGCTG ACACCAATTCTGGAGTTACAGATAGTCCACCCTTTTCCAGCATGAGGAGTGCTGACCACC CAACTGTATCTGATGATGATGACTTAGAGGCATCGGAGACTGGAACATGTGGTGTCGTTG GTTACGTATGGGAAAATGTTGATGCTGGAATTCAGGAAGAATGGAGACAATCAATTGCTC CAATTCCTAAAGATAAGCTTGAAGAGTTGCAGCATGCTGCGTCTTTTGATGACGATGATG ATGGATCAGAAGATGACTTTAAAAATCGGCCAACTGTACTGGACCAAGATGATGATTCTG ATGTTAGCGCGGTTGAGGATGATGATTATTCTAAGTTTGAGAAAGAGGTGGAAGAGACTT TCCAAAGGGCGTTGGATGGTATCCATCAAGATAACTTGATACTAGAAATTAATGCACTCA GGTTATCTTATAGCCTTCAACATGCAGACTGTGCTGGAGCTTTGTTCCATTCCGTTATGA GAAGTGCATTAGTGGCTGCACAATCTACTAATGGTAACCTTCTAAAGACAACTGCAGAAG CACTTGGCAAATGGAAGGACCTACTGCGAAATTACACCAAGTCAGTTGATGAGGAGATGG AAATATTATTGAAGTTCGAGGAAATGTGCCAAGAAAATACAAAAGAATTTTCTCCACTAT TTTCAAAGATCTTGCCTTACCTCTATGATAAGGAGGTAGTAAGTGAAGACGCAATTTTGA GATGGGCGGAGGAGAAAGAAAATGCCGATGAATCTGATAAGGTTTTCGTCAAACAATCTG AAGCTTTCATTCAGTGGCTTAAGGAAGCTGAAGAGGAAGATGAAGAAGAGGAGTAGAGCT GGAGCTTATGCTTGCATTCCTTTGAGCTCTTGGAGAAATGCAGCATTTGCCTTGTTTGAA TGGTCTGCCGGTGAGTTTGCAAGCGGCAAGTTTTGAAAACCTAATTGTTTGTACATTAAT TTAATGGCATTTTTGTTCCTAACCAATCTGGTAAAAGAAAGGAGCAACATTGCCCACGAG CCATGGGTTAAAACGACTGTAGAGTGTAGATAAGTTAAAACCCTTTTTCCTATGTTTGCT TCGCTGATGCTTCCATGAAGTTATTTTTTCCTTCTGATGAATTTGTTTAACTGCCCATCT GTTTCTTTGCACCCAGCACTTGCTCAAATCTTTAACAAAAGCTTAGTTAGATATGGCTCC TTTGGTTCTCTCATCTTTCTGCTGAGAGATGTAGTGGGGAAGAAAGCAATGGAGGGTTCT TGTCCAAAAGGCGCCAATGGATCATGTGGGTTGCGTAGATCCGGCACTAATCTTACCTCA AAAGGGGCACGGTTTGTTTAAAGTACGTTCTTTTTTCTCCCCAATCCTTTTAATTTTCTT CAGTTCCCTAAAAGCCTTCTATGATTTGTGCAACAACTGAACAAGAGGCTGCAAAATCAA AGGTCGATATAAAAAGAGTGAAAAAAAAACAGAACGTCCTTGAGAGCCAAAAGTGGAAAA GCTTGTGAGAATGAGCAGGGCCTGCGCTAAGCAACCTCTCTGTTCGGGCTTCCTTTGGCC CTGTTCTTCGTCGCATGTGCACTTGTAATTTATCCACTTCTAATACGGGCTGGTTGGTGG TGCTGGATCGGCATTGTTTAATGTTCAGAAGATTTTACTTTGACCATAAGAAACTTCGG