Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0810400-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:34644872:34649100:1 gene:Os02g0810400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Dual specificity kinase 1. (Os02t0810400-01)
Sequence

ATGGATCATGTAGTCGGGGGCAAGTTCAAGCTTGGAAAGAAGATCGGGAGTGGATCCTTC
GGGGAGCTCTTCCTTGCTGTTAATGTGCAGACTGGAGAGGAAGTCGCCGTCAAATTGGAA
AATGTTAAGACGAAGCACCCACAGCTTCATTATGAGTCGAAGCTGTACATGCTTCTGCAG
GGAGGAACTGGTATTCCGCACTTGAAGTGGTTTGGCGTGGAGGGAGAGTACAATGTGATG
GTGATCGATCTTCTTGGGCCAAGCCTTGAGGACCTATTCAACTATTGCAGTAGGAAATTC
TCGTTAAAGACTGTCCTCATGCTTGCTGATCAGATGATCAATCGAGTTGAGTACATGCAT
CAGAAGGGATTTCTTCACCGTGATATCAAGCCTGATAATTTCCTTATGGGGCTTGGTAGG
AAAGCCAATCAGGTATATATAATAGATTATGGGCTTGCGAAGAAATATAGGGACCTTCAG
ACTCACAAGCACATCCCATACAGAGAGAACAAGAACCTCACTGGAACAGCTCGGTATGCA
AGTGTCAATACCCATCTTGGTGTTGAGCAAAGCAGAAGAGATGATCTAGAATCTCTTGGT
TATGTCCTTATGTACTTCCTTAGAGGCAGCCTACCATGGCAGGGGCTGAAAGCAGGCACT
AAGAAGCAGAAGTACGACAAAATAAGTGAGAAAAAGATGCTTACTCCTGTGGAGGTTCTT
TGCAAATCTTACCCATCAGAATTCATTTCTTACTTCCACTACTGCCGTTCATTGAGGTTT
GAAGACAAGCCAGATTATTCTTACTTAAAGAGGCTATTCCGTGATCTCTTTATCCGGGAG
GGATATCAATTTGATTATGTATTTGACTGGACCATTTTGAAATATCCCCAGATAGGCTCC
AAACCACTGATGAGGCCAAGTGAAAGAACCAGTGGAGCTGCGGGACCTTCTATGGAGAAG
ATGGAAAAGGCCCCAGGTGAAGCATCTGGCAGAAGGAATCCTACTGGTTCTTTGAATCAG
AGTGACAATTATGCACAACGGCCGTCAATGTCACTAAAGGAAATCATGCATAGCACCGAC
CGGTCCGGCGAAAGGACCGTGGAAAGACCCCGTACATCCTCCCGTACAGGCAGTGCATCA
AGGAGAGCGGTTGCGTCAAGCAGCAGGCCAGGTTCATCGGTGGAACCAATGGAGCAGCAA
TACAGCCGGACAAGCAGGTTGTTCTCAAGCAGTGGAAGCCGTCCTTCCAGCACGCAGAGG
GTTAATCCATCGGTTGGAGAGACAAGGGCCACTTCTCTCTCACGAGCAGCCGTTGCAAGA
GGGTCCCGCGACGAGCCTCTCCACCGCAGCCTGGAGCTGCTGTCCCTTGGTGGCGGTAAG
AGGAAATAA

Peptide Sequence

PEP ID

Os02t0810400-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:34644872:34649100:1 gene:Os02g0810400 transcript:Os02t0810400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Dual specificity kinase 1. (Os02t0810400-01)
Sequence

MDHVVGGKFKLGKKIGSGSFGELFLAVNVQTGEEVAVKLENVKTKHPQLHYESKLYMLLQ
GGTGIPHLKWFGVEGEYNVMVIDLLGPSLEDLFNYCSRKFSLKTVLMLADQMINRVEYMH
QKGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYA
SVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKMLTPVEVL
CKSYPSEFISYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGS
KPLMRPSERTSGAAGPSMEKMEKAPGEASGRRNPTGSLNQSDNYAQRPSMSLKEIMHSTD
RSGERTVERPRTSSRTGSASRRAVASSSRPGSSVEPMEQQYSRTSRLFSSSGSRPSSTQR
VNPSVGETRATSLSRAAVARGSRDEPLHRSLELLSLGGGKRK

Transcript Sequence

Transcript ID

Os02t0810400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:34644872:34649100:1 gene:Os02g0810400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Dual specificity kinase 1. (Os02t0810400-01)
Sequence

GCTGGTCTCCGTCTTCGTCTTCTCCTCCTCCACCCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCCTCCCCTTTGTTCCGCCGCTTCCCCTCTCTCTCTACCTCTCGCGGCGAATTCGCC
GAGAGGGCGCAGGGAATTTTATTAGGAGAAATCCCCTTTTTGTATCCGTTTCTCCGGATC
CGCACACCTCCTGTTAATCCGCCGATTCTTCTTTGATTTGTTCATATTCGTTTTTTTTAT
TTTTTTCCCTTTGTTTGCCTTTTTATTCGTTCGATTGTGGGGGGAGGGAAGAGTTTGGTC
GACCGGATTTCTTGGTGGTTTGCCTGGATCTGGCGTCCTAGAGGCCCTCGTGCCCGAATC
CCGATTCGATTCGCCTCGGCGCGGCGCCGCTCGCCTCGACGGGTTTGGATCTCGGGGTGG
GATTAGAGGGGAAAGGGGGGGGGGGGGCAGTTGATTCGTTTGGTTGAGACCATCGGAGCA
GCAAGGAGATGGATCATGTAGTCGGGGGCAAGTTCAAGCTTGGAAAGAAGATCGGGAGTG
GATCCTTCGGGGAGCTCTTCCTTGCTGTTAATGTGCAGACTGGAGAGGAAGTCGCCGTCA
AATTGGAAAATGTTAAGACGAAGCACCCACAGCTTCATTATGAGTCGAAGCTGTACATGC
TTCTGCAGGGAGGAACTGGTATTCCGCACTTGAAGTGGTTTGGCGTGGAGGGAGAGTACA
ATGTGATGGTGATCGATCTTCTTGGGCCAAGCCTTGAGGACCTATTCAACTATTGCAGTA
GGAAATTCTCGTTAAAGACTGTCCTCATGCTTGCTGATCAGATGATCAATCGAGTTGAGT
ACATGCATCAGAAGGGATTTCTTCACCGTGATATCAAGCCTGATAATTTCCTTATGGGGC
TTGGTAGGAAAGCCAATCAGGTATATATAATAGATTATGGGCTTGCGAAGAAATATAGGG
ACCTTCAGACTCACAAGCACATCCCATACAGAGAGAACAAGAACCTCACTGGAACAGCTC
GGTATGCAAGTGTCAATACCCATCTTGGTGTTGAGCAAAGCAGAAGAGATGATCTAGAAT
CTCTTGGTTATGTCCTTATGTACTTCCTTAGAGGCAGCCTACCATGGCAGGGGCTGAAAG
CAGGCACTAAGAAGCAGAAGTACGACAAAATAAGTGAGAAAAAGATGCTTACTCCTGTGG
AGGTTCTTTGCAAATCTTACCCATCAGAATTCATTTCTTACTTCCACTACTGCCGTTCAT
TGAGGTTTGAAGACAAGCCAGATTATTCTTACTTAAAGAGGCTATTCCGTGATCTCTTTA
TCCGGGAGGGATATCAATTTGATTATGTATTTGACTGGACCATTTTGAAATATCCCCAGA
TAGGCTCCAAACCACTGATGAGGCCAAGTGAAAGAACCAGTGGAGCTGCGGGACCTTCTA
TGGAGAAGATGGAAAAGGCCCCAGGTGAAGCATCTGGCAGAAGGAATCCTACTGGTTCTT
TGAATCAGAGTGACAATTATGCACAACGGCCGTCAATGTCACTAAAGGAAATCATGCATA
GCACCGACCGGTCCGGCGAAAGGACCGTGGAAAGACCCCGTACATCCTCCCGTACAGGCA
GTGCATCAAGGAGAGCGGTTGCGTCAAGCAGCAGGCCAGGTTCATCGGTGGAACCAATGG
AGCAGCAATACAGCCGGACAAGCAGGTTGTTCTCAAGCAGTGGAAGCCGTCCTTCCAGCA
CGCAGAGGGTTAATCCATCGGTTGGAGAGACAAGGGCCACTTCTCTCTCACGAGCAGCCG
TTGCAAGAGGGTCCCGCGACGAGCCTCTCCACCGCAGCCTGGAGCTGCTGTCCCTTGGTG
GCGGTAAGAGGAAATAATATGGCAAGAGAAAGAGGAATCTCCACAACGGAAAGAGAAAGG
AAGAAACGCTGTTTGCGACTCTGTAAATGACAGGATTATCACCTATTTGTCAACAGTTCA
CCAGGAGCATCCCATAATTTCATGGTGCTCCGGCCCTGTTGTATCATTGCTTCATAGATA
GCAATAATTTGTTTTTGTTGTGTGTGTTCGCTGTTGCGTTAGGGCCAAGTCCTAGCTTTG
TGATGATTAATTTAGAGGTGGTCAAGATTCAACATATTTATGTTTCTTTACCTTACCCCC
CCTGGACTTGGCAACTTTTCCTGAGAGACAAGTATTCGTGTATCCCCCCCTTCTTATTCA
ACTCTGGATTTGCTTATTCAACAGAAGTTG