Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0809500-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:34596638:34599987:1 gene:Os02g0809500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSEC24, OsSEC27, SEC24, SEC27 description:Conserved hypothetical protein. (Os02t0809500-01)
Sequence

ATGATGAGTAATGGCCACAGCAACAGCAGCAAGAGCCTTGAAAGGTTTATATCTCGGAGG
GCTCTGCAGATGGGGAGCTCTGCTCCCTGCAAGACATGGGCACTGGGCTTCTTCTGTGGT
GTCTGCATTGTGTACCTGTTTGGTGTTGCTCTCCCACCTATCCAAATCCTGATGATCCGA
TCGGTACATCCACCGGTTCGGCGAGCAATCTTGTTGAATTCAACATCAACTGAACCTGGT
GGAGCTACAGAAACAGATGACTTATCTGTTTTACAAGAAAAGATAGAAATAGCCACCAAT
AGCAAGGACATCAATGAAGCTGATAAAATGCATTTGTATAATGCTTGGAGCACTTTACTG
GATACGACCAGTGATGAAGTTATGAAAAGTTCAGACGTGCCGCGGCCGCCTCATCTGGAG
AATTGCAGGCTTAAATGGGAAAGAAATAAGAAATTTGACAGTTATAGCGACAACGGCGTA
TTTCCTCCTTGGACATTATGGAAAGGGTCACTTGGTCTTGAGTTATTCAACCAGAACTAT
TCAGATTCAGAAGAGTGGAGGCAAATGTTTTTCAGGTCAAATGCTAAATCTGACAGGGCG
CCATATCCACCTTGGATTGCAGGATCAGATGAAGAAAACTATCCACTGACCAGACAAGTG
CAGAGAGATGTATGGATTCATCAACATCCTCCAAACTGCAGTGATCCAAGCTTGAGGTTT
CTCTATGCAGACTGGGAGAGGCTACCGGGATTTGGTATAGGTGCGCAACTCGCTGGAATG
TCGGGACTTCTTGCTATTGCTATAAAAGAGAGAAGGATTCTAGTTGCAGGATACTACAAC
CGTGCTGATCACAATGGTTGTAAAGGCCTAGCAAGATCTAGCTGGTCATGCTACTTTTTA
CCTGAAACATCTGCAGACTGCCAGAAACGTGCTTTAGATCTCATGCAAAGCAAAGATTCT
AGGGAAAATGGAATTATAAAAGTTAAGGAAAACTATACCTCCAAGCAAATATGGGCTGGG
CATATACCTAGGATATGGGGGAGACCATGGAAATATATGCAACCGACAACAGAGATAGAT
GGGAGATTGGTTAAAAATCATTGTAAAATGGATCGGAGATGGTGGATTGCACAGGCCCTG
AGATACCTAATGAGGTTCCAGTCAGAGTACATGTGCAGATTACTGAATGTGGCTAGACAT
TCAGCATTTGGCATGCAGGCAGCAAAGATGGTTCTTGAAAATGTCCCAGATCCACCAAAG
CCTAGCATTAGCAGAACAGAATCTGACATTGAGCGACTTGTGTGGTCGGAGCATAAACCA
TATATACCCGGGCCTCTTATCAGTATGCATGTAAGGATGGGAGATAAAGCTTGTGAAATG
GAAGTAGTTGGCTTTGAGAAATACATGGAGTTGGCTGGTCGTCTTCGAAAACGTTTTCCA
AGTCTCAAGAACATCTGGCTTTCTACTGAAATGCAGGAAGTTATCGACGAAACAAAATTA
TATCCCAAATGGAATTTCTATTTCACAAATGTGACGCGCCAAGATGTCAATGTGAGCATG
GCAATGTATGAGGCCAGCCTGGGCCGTGAGACCAGCACAAACTATCCCCTTGTCAATTTC
ATCATGGCCACTGAAGCAGATTTCTTCATTGGAGCCCTGGGATCAACCTGGTGCTACCTC
ATCGACGGCATGCGGAACACCGCAGGAAAGGTGATGTCTGGCTATCTGTCGGTGAACAAG
GACCGGTTCTGGTAA

Peptide Sequence

PEP ID

Os02t0809500-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:34596638:34599987:1 gene:Os02g0809500 transcript:Os02t0809500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSEC24, OsSEC27, SEC24, SEC27 description:Conserved hypothetical protein. (Os02t0809500-01)
Sequence

MMSNGHSNSSKSLERFISRRALQMGSSAPCKTWALGFFCGVCIVYLFGVALPPIQILMIR
SVHPPVRRAILLNSTSTEPGGATETDDLSVLQEKIEIATNSKDINEADKMHLYNAWSTLL
DTTSDEVMKSSDVPRPPHLENCRLKWERNKKFDSYSDNGVFPPWTLWKGSLGLELFNQNY
SDSEEWRQMFFRSNAKSDRAPYPPWIAGSDEENYPLTRQVQRDVWIHQHPPNCSDPSLRF
LYADWERLPGFGIGAQLAGMSGLLAIAIKERRILVAGYYNRADHNGCKGLARSSWSCYFL
PETSADCQKRALDLMQSKDSRENGIIKVKENYTSKQIWAGHIPRIWGRPWKYMQPTTEID
GRLVKNHCKMDRRWWIAQALRYLMRFQSEYMCRLLNVARHSAFGMQAAKMVLENVPDPPK
PSISRTESDIERLVWSEHKPYIPGPLISMHVRMGDKACEMEVVGFEKYMELAGRLRKRFP
SLKNIWLSTEMQEVIDETKLYPKWNFYFTNVTRQDVNVSMAMYEASLGRETSTNYPLVNF
IMATEADFFIGALGSTWCYLIDGMRNTAGKVMSGYLSVNKDRFW

Transcript Sequence

Transcript ID

Os02t0809500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:34596638:34599987:1 gene:Os02g0809500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSEC24, OsSEC27, SEC24, SEC27 description:Conserved hypothetical protein. (Os02t0809500-01)
Sequence

TGGTTTGTCAGTGACTTCTGCATGTGGCTGTGTTGTGCGACTACCTTGGTCCTTCCTGAT
TAGTGATGGGGTTTAGCGCATGGCAGTGTTTGAATGCAAGGGTCAGGTTGCGCTGGTAGG
TATCTGAGGAATTCAGGAATTGAGGATGATGAGTAATGGCCACAGCAACAGCAGCAAGAG
CCTTGAAAGGTTTATATCTCGGAGGGCTCTGCAGATGGGGAGCTCTGCTCCCTGCAAGAC
ATGGGCACTGGGCTTCTTCTGTGGTGTCTGCATTGTGTACCTGTTTGGTGTTGCTCTCCC
ACCTATCCAAATCCTGATGATCCGATCGGTACATCCACCGGTTCGGCGAGCAATCTTGTT
GAATTCAACATCAACTGAACCTGGTGGAGCTACAGAAACAGATGACTTATCTGTTTTACA
AGAAAAGATAGAAATAGCCACCAATAGCAAGGACATCAATGAAGCTGATAAAATGCATTT
GTATAATGCTTGGAGCACTTTACTGGATACGACCAGTGATGAAGTTATGAAAAGTTCAGA
CGTGCCGCGGCCGCCTCATCTGGAGAATTGCAGGCTTAAATGGGAAAGAAATAAGAAATT
TGACAGTTATAGCGACAACGGCGTATTTCCTCCTTGGACATTATGGAAAGGGTCACTTGG
TCTTGAGTTATTCAACCAGAACTATTCAGATTCAGAAGAGTGGAGGCAAATGTTTTTCAG
GTCAAATGCTAAATCTGACAGGGCGCCATATCCACCTTGGATTGCAGGATCAGATGAAGA
AAACTATCCACTGACCAGACAAGTGCAGAGAGATGTATGGATTCATCAACATCCTCCAAA
CTGCAGTGATCCAAGCTTGAGGTTTCTCTATGCAGACTGGGAGAGGCTACCGGGATTTGG
TATAGGTGCGCAACTCGCTGGAATGTCGGGACTTCTTGCTATTGCTATAAAAGAGAGAAG
GATTCTAGTTGCAGGATACTACAACCGTGCTGATCACAATGGTTGTAAAGGCCTAGCAAG
ATCTAGCTGGTCATGCTACTTTTTACCTGAAACATCTGCAGACTGCCAGAAACGTGCTTT
AGATCTCATGCAAAGCAAAGATTCTAGGGAAAATGGAATTATAAAAGTTAAGGAAAACTA
TACCTCCAAGCAAATATGGGCTGGGCATATACCTAGGATATGGGGGAGACCATGGAAATA
TATGCAACCGACAACAGAGATAGATGGGAGATTGGTTAAAAATCATTGTAAAATGGATCG
GAGATGGTGGATTGCACAGGCCCTGAGATACCTAATGAGGTTCCAGTCAGAGTACATGTG
CAGATTACTGAATGTGGCTAGACATTCAGCATTTGGCATGCAGGCAGCAAAGATGGTTCT
TGAAAATGTCCCAGATCCACCAAAGCCTAGCATTAGCAGAACAGAATCTGACATTGAGCG
ACTTGTGTGGTCGGAGCATAAACCATATATACCCGGGCCTCTTATCAGTATGCATGTAAG
GATGGGAGATAAAGCTTGTGAAATGGAAGTAGTTGGCTTTGAGAAATACATGGAGTTGGC
TGGTCGTCTTCGAAAACGTTTTCCAAGTCTCAAGAACATCTGGCTTTCTACTGAAATGCA
GGAAGTTATCGACGAAACAAAATTATATCCCAAATGGAATTTCTATTTCACAAATGTGAC
GCGCCAAGATGTCAATGTGAGCATGGCAATGTATGAGGCCAGCCTGGGCCGTGAGACCAG
CACAAACTATCCCCTTGTCAATTTCATCATGGCCACTGAAGCAGATTTCTTCATTGGAGC
CCTGGGATCAACCTGGTGCTACCTCATCGACGGCATGCGGAACACCGCAGGAAAGGTGAT
GTCTGGCTATCTGTCGGTGAACAAGGACCGGTTCTGGTAAGCAATTCAGAAGCTGCTAAA
CCTTGTTCATTGTATTTTAGCTCCTCTGAATAGATATGTTTGGCCTAAGTTTGCTTCTGT
ACGGCAATAGGGCATGTATATATGCACCATCCTAGCAGATAACTTTAGCGTGTGAAACTT
CTGAGCTAATAGGAAAACAGTATCGTTATATC