Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0806700-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:34439819:34444555:-1 gene:Os02g0806700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Retroelement pol polyprotein-like. (Os02t0806700-01)
Sequence	ATGGAGAGCAGATGGAGGAAGGCCAAGATGTCGCTGGGGCTCAACCTCTGCGTCTACGTG CCCAGGACGCTGGACGACGGCGACTCGCCGTCCACCGGGTCGTCCACGGCGGCGCTGGTG TCGCCGGTGGCGTCCTCGTCGTCGGCGGCGACCAGCGCCAACACCACGCCCACGGCGGAG CAGAGGGTCAAGGGCGCCGGCGCGCTCATGCCGACCACCCCGACGCCGACCTCCGCCGGA CTTCGCCTCTCCAAATCCGGCAGCAAATCCTTCAAGAAAACATGTGCGATATGTTTGACC ACAATGAAGCCTGGTCAGGGCCATGCTCTATTCACAGCAGAGTGCTCACATACCTTTCAC TTCCATTGTATAGCTGCAAATGTTAAGCATGGAAGCAACAATTGCCCAGTTTGCCGCACC AAGTGGAAGGAACTCCCATTTCGAGGTCCCTTGCCTGGTGAATTTCCTCAAGGAAGTGCA AGGATTAATCCAGTTAATGGGCACCAAAATGGCGGGCAGATGACCATACTGCGACCACTT CCCCGTGCTCGTTCTTCTGGTCGGCTGCATCATATGACATCGTTGTTGCCTGACACTGAC CGTAGTATTTTTAACGATGATGAACCCTTGGACTCACTGTCTGAAGCAAATGAAGGCTCG CAGCAGGGGTGTTTAAGAACAGTGGAAATAAAGACATATCCTGAGTTCACTGAAGTTCCA GAAAGTACTTCAGAAAGAAATTTTACAGTCCTAGTTCATCTAAAGGCACCCCTTGCTCAG ACTTTGCAAACAAGCAGCAAACTTGAAGATGGCAATAGCTTGGGCACAACTCGAGCCCCT GTTGATCTCATCACAGTGCTTGATGTCAGTGGGAGCATGGCTGGTACCAAACTTGCATTG CTGAAAAGAGCCATGGGATTTGTCATTCAGAACCTTGGCTCCTCAGATCGGCTTTCTGTA ATTGCCTTCTCATCATCTGCACGTAGACTCTTCCCCCTCCGTCGGATGACTGAGACTGGT CGTCAGCAAAGCTTGCAAGCTGTTTATTCACTGACATCAAATGGTGGGACCAATATTGCT GAGGGCCTGAGGAAAGGCTCCAAAGTGATTGAAGATCGACAGGCCAAGAATCCAGTGTGC AGCATCATCCTACTATCAGATGGGCAAGATACATATACAGTCTCACCAACCGCTGGTGTA CACAAAGCAGCACCAGAGTACTGCTCACTCCTGCCATATACTAGTAATGGTTGTCAACAG GTACCAGTTCATGTCTTTGGATTTGGTGCTGACCATGATTCAGTCTCGCTGCATTCAATC TCACAAACCTCCGGGGGCACCTTTTCATTCATAGAGACAGAGGCTGCCATCCAAGATGCA TTTGCCCAGTGTATTGGTGGACTCTTGAGTGTTGTTGCACAGGATTTGCATGTAAAGGTG GAGAGCCTCCACCCTGATGTACACTTTGGCTCGATCAGATCAGGAAGCTATTCTAGCAGA CTTGCAGATGACAAGAGGAATGGCTCCATAGATGTTGGTGACATGTATGCCGAAGAGGAG AGGGATTTCCTTATGTCAGTAAATGTTCCCCCAGGTTACGGTGAAACAGCACTTCTCAAA GTTGGCTGTGTCTACAAAGATCCACTGATGAAGGAGACTATCAATATGGCTGATGTGCAA GTCAAGATCTCTAGACCAGCATTCGTCTCAGTACAAAGCGTGTCAATCGAGGTGGACCGA CAAAAGAACCGTCTTCATGCAGCTGAAGTCATGGCTGAAGCAAGGTTGTCTGCCGAGCGT GGTGACCTGACACATGCTGTTTCCTTACTCGAAGACTGCCGGAGGATGATCATGGGGTCA ACATCAGGACAATCCGGTGATCGGTTGTGCCAAGCATTGGATGCTGAGCTGAAGGAGATG CAAGAAAGGATGGCCAATCGCCAAAGGTACGAAGCATCAGGCCGCGCCTATGTCCTCTCC GGCTTGAGCTCACACTCATGGCAGAGAGCAACTGCGCGAGGTGACTCCACAGACAGCGAG AGCCTAATCCAGGCCTACCAGACTTCATCCATGGTCGACATGCTGCTGCGCTCGCAGACA ATGAGCCGCTCCTCAACCCCTCCACAGATGAGGCATGTGAAGTCGTTTCCAGCGCGCCCG CAGCCTAGGTAA

Peptide Sequence

PEP ID	Os02t0806700-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:34439819:34444555:-1 gene:Os02g0806700 transcript:Os02t0806700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Retroelement pol polyprotein-like. (Os02t0806700-01)
Sequence	MESRWRKAKMSLGLNLCVYVPRTLDDGDSPSTGSSTAALVSPVASSSSAATSANTTPTAE QRVKGAGALMPTTPTPTSAGLRLSKSGSKSFKKTCAICLTTMKPGQGHALFTAECSHTFH FHCIAANVKHGSNNCPVCRTKWKELPFRGPLPGEFPQGSARINPVNGHQNGGQMTILRPL PRARSSGRLHHMTSLLPDTDRSIFNDDEPLDSLSEANEGSQQGCLRTVEIKTYPEFTEVP ESTSERNFTVLVHLKAPLAQTLQTSSKLEDGNSLGTTRAPVDLITVLDVSGSMAGTKLAL LKRAMGFVIQNLGSSDRLSVIAFSSSARRLFPLRRMTETGRQQSLQAVYSLTSNGGTNIA EGLRKGSKVIEDRQAKNPVCSIILLSDGQDTYTVSPTAGVHKAAPEYCSLLPYTSNGCQQ VPVHVFGFGADHDSVSLHSISQTSGGTFSFIETEAAIQDAFAQCIGGLLSVVAQDLHVKV ESLHPDVHFGSIRSGSYSSRLADDKRNGSIDVGDMYAEEERDFLMSVNVPPGYGETALLK VGCVYKDPLMKETINMADVQVKISRPAFVSVQSVSIEVDRQKNRLHAAEVMAEARLSAER GDLTHAVSLLEDCRRMIMGSTSGQSGDRLCQALDAELKEMQERMANRQRYEASGRAYVLS GLSSHSWQRATARGDSTDSESLIQAYQTSSMVDMLLRSQTMSRSSTPPQMRHVKSFPARP QPR

Transcript Sequence

Transcript ID	Os02t0806700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:34439819:34444555:-1 gene:Os02g0806700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Retroelement pol polyprotein-like. (Os02t0806700-01)
Sequence	AGCCCTTCTTCTTTCTTTTTTCCCCCTCGCCATAGGCGCCCTGTGCTTTGCTCGCTCGCT GCTTTTCTCTTTCTTAAAAGGCTGCTCCCTCACTCACAACTCCCTCTCTCTCTCTCTCTC TCTCTCTCTCTCTCTCTCTCCTCACCTCTTCTTGTTCTTCTTCTCTCTCTCTTGTCACTC ATCATCATCACTCTTCAGCTTGCTTGGTTGGTTGGTGGAGCTTGGGAGTTGAGGTCAAAT AGCCATCGATACACACTCCTCTTTCTTTTCTCTCTTCATTTCTTTCTTTACATCGTCTCT TTCTTGATTTCCCAATCTACTAAGCTCCTACTAGCTCTGTGCTCTGCTGCTTCCTCCCAT CCATGGCGGCGGTTGCCAGCGACCCACCTACCTACAAGTAGCTTAAGCTCAAGCTCAGCT CAGATCGGAGAGGGGTGGTAGAGGTAGTAGCAGTAGTTGAGAGAGAGAGTGAGGATGGAG AGCAGATGGAGGAAGGCCAAGATGTCGCTGGGGCTCAACCTCTGCGTCTACGTGCCCAGG ACGCTGGACGACGGCGACTCGCCGTCCACCGGGTCGTCCACGGCGGCGCTGGTGTCGCCG GTGGCGTCCTCGTCGTCGGCGGCGACCAGCGCCAACACCACGCCCACGGCGGAGCAGAGG GTCAAGGGCGCCGGCGCGCTCATGCCGACCACCCCGACGCCGACCTCCGCCGGACTTCGC CTCTCCAAATCCGGCAGCAAATCCTTCAAGAAAACATGTGCGATATGTTTGACCACAATG AAGCCTGGTCAGGGCCATGCTCTATTCACAGCAGAGTGCTCACATACCTTTCACTTCCAT TGTATAGCTGCAAATGTTAAGCATGGAAGCAACAATTGCCCAGTTTGCCGCACCAAGTGG AAGGAACTCCCATTTCGAGGTCCCTTGCCTGGTGAATTTCCTCAAGGAAGTGCAAGGATT AATCCAGTTAATGGGCACCAAAATGGCGGGCAGATGACCATACTGCGACCACTTCCCCGT GCTCGTTCTTCTGGTCGGCTGCATCATATGACATCGTTGTTGCCTGACACTGACCGTAGT ATTTTTAACGATGATGAACCCTTGGACTCACTGTCTGAAGCAAATGAAGGCTCGCAGCAG GGGTGTTTAAGAACAGTGGAAATAAAGACATATCCTGAGTTCACTGAAGTTCCAGAAAGT ACTTCAGAAAGAAATTTTACAGTCCTAGTTCATCTAAAGGCACCCCTTGCTCAGACTTTG CAAACAAGCAGCAAACTTGAAGATGGCAATAGCTTGGGCACAACTCGAGCCCCTGTTGAT CTCATCACAGTGCTTGATGTCAGTGGGAGCATGGCTGGTACCAAACTTGCATTGCTGAAA AGAGCCATGGGATTTGTCATTCAGAACCTTGGCTCCTCAGATCGGCTTTCTGTAATTGCC TTCTCATCATCTGCACGTAGACTCTTCCCCCTCCGTCGGATGACTGAGACTGGTCGTCAG CAAAGCTTGCAAGCTGTTTATTCACTGACATCAAATGGTGGGACCAATATTGCTGAGGGC CTGAGGAAAGGCTCCAAAGTGATTGAAGATCGACAGGCCAAGAATCCAGTGTGCAGCATC ATCCTACTATCAGATGGGCAAGATACATATACAGTCTCACCAACCGCTGGTGTACACAAA GCAGCACCAGAGTACTGCTCACTCCTGCCATATACTAGTAATGGTTGTCAACAGGTACCA GTTCATGTCTTTGGATTTGGTGCTGACCATGATTCAGTCTCGCTGCATTCAATCTCACAA ACCTCCGGGGGCACCTTTTCATTCATAGAGACAGAGGCTGCCATCCAAGATGCATTTGCC CAGTGTATTGGTGGACTCTTGAGTGTTGTTGCACAGGATTTGCATGTAAAGGTGGAGAGC CTCCACCCTGATGTACACTTTGGCTCGATCAGATCAGGAAGCTATTCTAGCAGACTTGCA GATGACAAGAGGAATGGCTCCATAGATGTTGGTGACATGTATGCCGAAGAGGAGAGGGAT TTCCTTATGTCAGTAAATGTTCCCCCAGGTTACGGTGAAACAGCACTTCTCAAAGTTGGC TGTGTCTACAAAGATCCACTGATGAAGGAGACTATCAATATGGCTGATGTGCAAGTCAAG ATCTCTAGACCAGCATTCGTCTCAGTACAAAGCGTGTCAATCGAGGTGGACCGACAAAAG AACCGTCTTCATGCAGCTGAAGTCATGGCTGAAGCAAGGTTGTCTGCCGAGCGTGGTGAC CTGACACATGCTGTTTCCTTACTCGAAGACTGCCGGAGGATGATCATGGGGTCAACATCA GGACAATCCGGTGATCGGTTGTGCCAAGCATTGGATGCTGAGCTGAAGGAGATGCAAGAA AGGATGGCCAATCGCCAAAGGTACGAAGCATCAGGCCGCGCCTATGTCCTCTCCGGCTTG AGCTCACACTCATGGCAGAGAGCAACTGCGCGAGGTGACTCCACAGACAGCGAGAGCCTA ATCCAGGCCTACCAGACTTCATCCATGGTCGACATGCTGCTGCGCTCGCAGACAATGAGC CGCTCCTCAACCCCTCCACAGATGAGGCATGTGAAGTCGTTTCCAGCGCGCCCGCAGCCT AGGTAACTGCAATTTCTAGTGTTTGGCAACGCCAATAAGGATGGGTTTTGCTAAAGCCTA GATGTGAATTTGGTGAAAGTAGTAGTGTCAGTTGAATTCTTGGTTTTGTGGCGGGAGGAC GGGACGGGGGTATAGTTTGTGTGGTATAAGGGGGATTTTAACGGTGTAAATTAATTTGGG TGTGGTGGGGGTAAAAGGGAAAAAGAATCTGTATTTGGGAGAAGGATGGTATAAGAGTTG GGGAAATGGGGTAAGATAGGGTGGCTATTATTTTTTTTTTCCTTCTTGTTGGTTACCTGG TATACTCCCAGTATTGTACTAGTAGCTCTCCTCTCTCCTTTGTGTGGTGATGTACATAAA GAGAAGGGTATACATTTGTGAACTGGAATGTGGTTGAGGATGGGGATGGATACCTAATCC TTTTGC