Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0805100-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:34348582:34349843:1 gene:Os02g0805100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IAA9 description:Similar to Auxin-responsive protein IAA12 (Indoleacetic acid-induced protein 12) (BODENLOS protein). (Os02t0805100-01)
Sequence	ATGGAGCTGGAGCTTGGGCTGGCGCCACCGAATTCCGGTCATCTCGTCGTCGACGAGCTC AGCAGCAGCAGCAGCAGCGGCGGCGGCAGCGGCAGCGCGCCGGTGTCTGCCTCGTCGGCC GGGAAGAGGGGATTCAGGGAGGCGTTCCAGGAGACGCTGCTGCTCTTCGACGACGGCAGC TGCTGCAACACCAGCGACGACGATTGCAGGAGGAGGAAGAAGACGGTGGTGGGGTGGCCA CCGGTGAGCTCGGCGCGGCGGGCGTGCGGCGGCGCCAACTACGTGAAGGTGAAGAAGGAA GGCGACGCCATCGGGAGGAAGGTTGATTTGGCCCTCCATTCCTCCTACGACGAGCTCGCT GCCACGCTCGCCCGCATGTTCCCCACCAACGACCACCAAGGCGAGAAGAAAATGGCCAAT GATGATCATGGCGATGCCGCTGGACCTGTGGTCACCTACGAGGATGGTGATGGGGATTGG ATGCTGGTTGGGGACGTGCCATGGGATGATTTTGCACGATCTGTGAAACGCCTGAAGATA CTGGGTTAA

Peptide Sequence

PEP ID	Os02t0805100-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:34348582:34349843:1 gene:Os02g0805100 transcript:Os02t0805100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IAA9 description:Similar to Auxin-responsive protein IAA12 (Indoleacetic acid-induced protein 12) (BODENLOS protein). (Os02t0805100-01)
Sequence	MELELGLAPPNSGHLVVDELSSSSSSGGGSGSAPVSASSAGKRGFREAFQETLLLFDDGS CCNTSDDDCRRRKKTVVGWPPVSSARRACGGANYVKVKKEGDAIGRKVDLALHSSYDELA ATLARMFPTNDHQGEKKMANDDHGDAAGPVVTYEDGDGDWMLVGDVPWDDFARSVKRLKI LG

Transcript Sequence

Transcript ID	Os02t0805100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:34348582:34349843:1 gene:Os02g0805100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IAA9 description:Similar to Auxin-responsive protein IAA12 (Indoleacetic acid-induced protein 12) (BODENLOS protein). (Os02t0805100-01)
Sequence	AAAGTCATCGCCATCATCGATCGATCGATCACAACTACTAGAAATCCAGCCAAGAAGATC GAGACCGGATACAGCTAGCAATCCATCCAAGAAGATCGAGAGAGCGGATACAGCTAGCCT AGCTACGCGAAGGATCAGATCATCGGCATGGAGCTGGAGCTTGGGCTGGCGCCACCGAAT TCCGGTCATCTCGTCGTCGACGAGCTCAGCAGCAGCAGCAGCAGCGGCGGCGGCAGCGGC AGCGCGCCGGTGTCTGCCTCGTCGGCCGGGAAGAGGGGATTCAGGGAGGCGTTCCAGGAG ACGCTGCTGCTCTTCGACGACGGCAGCTGCTGCAACACCAGCGACGACGATTGCAGGAGG AGGAAGAAGACGGTGGTGGGGTGGCCACCGGTGAGCTCGGCGCGGCGGGCGTGCGGCGGC GCCAACTACGTGAAGGTGAAGAAGGAAGGCGACGCCATCGGGAGGAAGGTTGATTTGGCC CTCCATTCCTCCTACGACGAGCTCGCTGCCACGCTCGCCCGCATGTTCCCCACCAACGAC CACCAAGGCGAGAAGAAAATGGCCAATGATGATCATGGCGATGCCGCTGGACCTGTGGTC ACCTACGAGGATGGTGATGGGGATTGGATGCTGGTTGGGGACGTGCCATGGGATGATTTT GCACGATCTGTGAAACGCCTGAAGATACTGGGTTAACTGAACTGAAGGAGATGCATGCGT GAGTTGATGGAGCACAGCTCGGTTTTGGTTGCCTGGCATCTGCGTGTGGGTGTGCACTGA TGTATGTACATGTTTTCGTTTTCAGTCAGGATGTTAGGACGAGAGAAAGAGCTTTCTGTC AAAGACTATATACTGCTAGCTTATATATACTGTAGTTGGGCACATCTCATGTGTGCCCAG GGCTAGGTTTTGAGAATGTTTACAGAGTTCTGTGTTTTTACACCTTCTATATGTTTTGCA AACTGATCTTGTACTATAATACTACTTTTATTTATTTCTCTCTTTTTTTTC