Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0803700-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:34266081:34269923:-1 gene:Os02g0803700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:rice homolog of HIV-1 Tat binding protein-1, homolog of human TBP-1, 19S regulatory particle ATPase subunit 5a, RP triple A-ATPase 5a description:Similar to 26S protease regulatory subunit 6A homolog (TAT-binding protein homolog 1) (TBP-1). (Os02t0803700-01);Similar to 26S protease regulatory subunit 6A homolog. (Os02t0803700-03)
Sequence	ATGTCGTCGCCGCCGCCCGCCGCCGCCGCCGCGATGGCCGTCGACGACGCCGACGACGAC CAGCTCGCCTCCATGTCCACGGAGGACATCGTCAGGGCAACCCGCCTCCTCGACAACGAG ACCCGCGTCCTCAAGGATGAGCTGCAGCGGACGAACCTTGAGGTGGAATCCTACAAGGAG AAGATCAAGGAGAACCAGGAGAAGATCAAACTCAACAAGCAGCTGCCTTACCTTGTCGGC AACATCGTCGAGATATTGGAAATGAACCCCGAGGATGAGGCTGAAGAGGATGGTGCGAAC ATCGATCTGGATTCACAAAGGAAAGGAAAATGCGTTGTTTTGAAGACATCCACAAGACAA ACAATATTCCTTCCTGTAATCGGGCTTGTTGACCCTGAAAAGCTCAAGCCTGGGGATTTG GTTGGAGTCAACAAAGACAGCTACTTGATACTAGACACGCTACCTTCAGAATATGATTCA CGGGTTAAGGCAATGGAGGTAGATGAAAAGCCTACAGAGGATTACAATGACATTGGTGGC CTTGAGAAACAGATTCAAGAGCTTGTTGAAGCAATAGTATTGCCCATGACTCACAAGGAC CGGTTTCAGAAGTTGGGAATTCGCCCCCCGAAAGGTGTTCTTTTGTACGGACCACCTGGC ACTGGAAAGACCCTAATGGCTCGTGCATGTGCTGCCCAAACTAACGCCACATTTCTGAAA CTTGCTGGTCCACAGCTTGTCCAGATGTTCATCGGTGATGGTGCAAAGCTTGTCCGTGAT GCCTTTCAGCTTGCAAAGGAGAAATCCCCCTGCATCATTTTTATTGATGAAATTGACGCA ATTGGAACAAAGCGTTTTGATAGTGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATG TTGGAGTTGCTGAATCAGCTAGATGGATTCAGTAGTGACGAGAGGATAAAGGTGATAGCT GCAACTAATCGCGCGGACATTCTTGATCCTGCTTTGATGAGGTCTGGTAGGCTGGACCGA AAAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAATCCATTCA AGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTGGCACGATCTACGGACGAC TTCAATGGTGCACAACTGAAGGCCGTTTGTGTAGAAGCAGGCATGCTTGCCCTACGCCGA GATGCTACAGAGGTGACACACGAGGATTTCAATGAAGGGATCATACAAGTGCAAGCCAAA AAGAAGTCCAGTTTAAATTATTACGCTTAA

Peptide Sequence

PEP ID	Os02t0803700-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:34266081:34269923:-1 gene:Os02g0803700 transcript:Os02t0803700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:rice homolog of HIV-1 Tat binding protein-1, homolog of human TBP-1, 19S regulatory particle ATPase subunit 5a, RP triple A-ATPase 5a description:Similar to 26S protease regulatory subunit 6A homolog (TAT-binding protein homolog 1) (TBP-1). (Os02t0803700-01);Similar to 26S protease regulatory subunit 6A homolog. (Os02t0803700-03)
Sequence	MSSPPPAAAAAMAVDDADDDQLASMSTEDIVRATRLLDNETRVLKDELQRTNLEVESYKE KIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQ TIFLPVIGLVDPEKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGG LEKQIQELVEAIVLPMTHKDRFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLK LAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTM LELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPSEEARARILQIHS RKMNVNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVTHEDFNEGIIQVQAK KKSSLNYYA

Transcript Sequence

Transcript ID	Os02t0803700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:34266081:34269923:-1 gene:Os02g0803700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:rice homolog of HIV-1 Tat binding protein-1, homolog of human TBP-1, 19S regulatory particle ATPase subunit 5a, RP triple A-ATPase 5a description:Similar to 26S protease regulatory subunit 6A homolog (TAT-binding protein homolog 1) (TBP-1). (Os02t0803700-01);Similar to 26S protease regulatory subunit 6A homolog. (Os02t0803700-03)
Sequence	ACAGTAAACTGACCAACGCAAACCGCATCGATCAACTCCTTCCCCAAGTCGAAGCAAAAT CCCTAGCGATGTCGTCGCCGCCGCCCGCCGCCGCCGCCGCGATGGCCGTCGACGACGCCG ACGACGACCAGCTCGCCTCCATGTCCACGGAGGACATCGTCAGGGCAACCCGCCTCCTCG ACAACGAGACCCGCGTCCTCAAGGATGAGCTGCAGCGGACGAACCTTGAGGTGGAATCCT ACAAGGAGAAGATCAAGGAGAACCAGGAGAAGATCAAACTCAACAAGCAGCTGCCTTACC TTGTCGGCAACATCGTCGAGATATTGGAAATGAACCCCGAGGATGAGGCTGAAGAGGATG GTGCGAACATCGATCTGGATTCACAAAGGAAAGGAAAATGCGTTGTTTTGAAGACATCCA CAAGACAAACAATATTCCTTCCTGTAATCGGGCTTGTTGACCCTGAAAAGCTCAAGCCTG GGGATTTGGTTGGAGTCAACAAAGACAGCTACTTGATACTAGACACGCTACCTTCAGAAT ATGATTCACGGGTTAAGGCAATGGAGGTAGATGAAAAGCCTACAGAGGATTACAATGACA TTGGTGGCCTTGAGAAACAGATTCAAGAGCTTGTTGAAGCAATAGTATTGCCCATGACTC ACAAGGACCGGTTTCAGAAGTTGGGAATTCGCCCCCCGAAAGGTGTTCTTTTGTACGGAC CACCTGGCACTGGAAAGACCCTAATGGCTCGTGCATGTGCTGCCCAAACTAACGCCACAT TTCTGAAACTTGCTGGTCCACAGCTTGTCCAGATGTTCATCGGTGATGGTGCAAAGCTTG TCCGTGATGCCTTTCAGCTTGCAAAGGAGAAATCCCCCTGCATCATTTTTATTGATGAAA TTGACGCAATTGGAACAAAGCGTTTTGATAGTGAAGTTAGTGGTGACAGAGAAGTGCAGC GCACAATGTTGGAGTTGCTGAATCAGCTAGATGGATTCAGTAGTGACGAGAGGATAAAGG TGATAGCTGCAACTAATCGCGCGGACATTCTTGATCCTGCTTTGATGAGGTCTGGTAGGC TGGACCGAAAAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAA TCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTGGCACGATCTA CGGACGACTTCAATGGTGCACAACTGAAGGCCGTTTGTGTAGAAGCAGGCATGCTTGCCC TACGCCGAGATGCTACAGAGGTGACACACGAGGATTTCAATGAAGGGATCATACAAGTGC AAGCCAAAAAGAAGTCCAGTTTAAATTATTACGCTTAATTCTTCCGAGAGAGTTATTAGG CCTAAGGAAACGCTCCGTCCAAAATTGTTTGTTTGTAACACTACCGTTTTATATATTTGT GTGGTTCAAGATGTGATTGTACGAAACATGTCTTGCGCTGTTCCTTCTCTGCTTGATATA TACTGATAGAAGTTGAC