Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0798700-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:34000557:34007221:1 gene:Os02g0798700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Neurochondrin domain containing protein. (Os02t0798700-01)
Sequence	GGAGGTTTCCATTCAAGACCAGTGCTCGCTGCGAGTCCCGACGCGGCGGCGGCGGCGGAG CCGCTCTCCTCACCCGCTCGCAATCGCTGCTCCGTTCGCCGCCTCACATCCATGGATTCC ACCCCGGCTCCTGCCGCCGCCGCCGCGGAGACGCCGACCACCGCCCCGGCGTTCGAGGAA TGCCTCCGCCTCCTCCGCGGGGAGCGCGACGAGCAGAAGCTGGCGGGCCTCCTCGTCGCC GCCAACCTCTGCCGCGCCGGCGACGCCGCCTCCGTCGTCGAGGTGTACCGCGCCGTCGGG CCCCGGTTCCTCCGCCGCCTCCTCAACACCGGGCTGGGGAAAGTGGAGGGCGGCAAGGAG GAGGACAGGGAGGCGTACCTGCGTCTCTCGGTGACGGTGCTTTCCGGGCTTGCTCGATTC CCAGAGGTTGCCGCCGACGAGGGGGTCGTCTCCACTGTGCCCCTCATCGCCGAGATCGTC TCCAAATCGTCTGATCTGGCAATTACTGAAGAATGTTTTGAGCTCCTGTCTCTTATTGCA ATAGCTTCAGATGGTGGGGCGCATACGTTTTGTGAACCTGGAGTGATGGATATGCTCTTC CTCCAAATCTCAAACTTCCCAGATGGTTCAAGGTGCTTAGAGCTTGCCATTCATCTAATG CAGCTACTTGTTCATAAAATCAGAATAGACAACATGACCGTGGAGAAACTGCAAGGCATG ACAAGCATGGTGACCTCACTTGCTAGGCTTTTTGCTGTTCTTCATACTACAGTTAAATTT GAAGCGCTGCATATGCTTACCGCCCTTCTATCCCAAAAGGAATCTCCGCTTCATGACGCT TTGAGATCAGTACCTTCCATGATTTGGAAATGTCAAATTCGAGTTGGGATAACGGCCGTT CTCCAAAACCGTGTTGTATCTTCTGAAAAGTTGCAAGCTCTTCTTTTGGCGGAGTGCATG ATGTCTATACTTGGTGAGAATTGGCTGTCAGAAGAATACAAAGTCCCTGATGACCAGAAT ATGATGCCTGTTGATAAATTTGTATTGCTTGTCCTAGAATCTGCAAGAATCGAAGTTTCT GTCCTTCTAAATGAGCTTGCTTATTTGAAGTATGAATCTTCAAAAAATTCCCAGAGAGAT GATGCCATCAGTCAGAAAGAGAGAAACCTGGCTATATTATTTTCACTAATAGAAAGAATA ATAAAAATGATATCAAATGCCAGTAGTGGGGAAGGTGCTGTATGTCAGACCATCCGTGAG AGCACCATCATGAAAGCAATTACAGGATTAAATGAGACAGTTGGCTTAGTTTTAGACTTT CTGCAGGACGCAAAGGATCATGGGCAAAGGAAAGGCGATGATCTTTTGGCGGCTGTGAGA ATAGTAGGAAGTTATCTGGCAGAGGCACCATATGCCTGCAAGGAGAAGATTAGACATCTG CTGGAATTTATCTTCTCTGTTGAAGGGCAAGATGAATCAAGCTCATTCCATTCTATTTGT TTTATGCTTCCCATGCTATCACAAATAACAATGGAGGCTGATGGATGTAGAATTTTGGCA TCATTTGGAGGCTATAAAATGGTTATAGACTGCCTTATTAAAATGATCGAACAGAATGGA ATGATGATTGACACTGGTAACATGTTTTTAGCATGTGATACCATCATAAACTTTTTGTCA AATATGAAAAATGCTCATATTCAAATGGGGTCTTGTTTTGTCGGCCTTCTAAAAGCACTT GTTTCATGGACTGGAACCGCCGATGATTCATCAGTTATCATAACAGCCTCCTGCTTATGC ACGTTGGTGTTGGACTTAACAACAGAAGAGTTTTTATTGAGCAGCTCTGATTTTGATTCC AAGACACTTGAGAAGTTGTCAAAGCTCATTGCCAGAAGTTTGCATCAGGGCATTCCTGAC GACGACATAGAACAATCCAACCAAAAGCAAATCATACTATCAGGTTACAGGAGGTGGTCT GATAGATATCCACGTGTTAAAAACATCCTGCAGCAGCATGTTTCTGTGTGA

Peptide Sequence

PEP ID	Os02t0798700-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:34000557:34007221:1 gene:Os02g0798700 transcript:Os02t0798700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Neurochondrin domain containing protein. (Os02t0798700-01)
Sequence	GGFHSRPVLAASPDAAAAAEPLSSPARNRCSVRRLTSMDSTPAPAAAAAETPTTAPAFEE CLRLLRGERDEQKLAGLLVAANLCRAGDAASVVEVYRAVGPRFLRRLLNTGLGKVEGGKE EDREAYLRLSVTVLSGLARFPEVAADEGVVSTVPLIAEIVSKSSDLAITEECFELLSLIA IASDGGAHTFCEPGVMDMLFLQISNFPDGSRCLELAIHLMQLLVHKIRIDNMTVEKLQGM TSMVTSLARLFAVLHTTVKFEALHMLTALLSQKESPLHDALRSVPSMIWKCQIRVGITAV LQNRVVSSEKLQALLLAECMMSILGENWLSEEYKVPDDQNMMPVDKFVLLVLESARIEVS VLLNELAYLKYESSKNSQRDDAISQKERNLAILFSLIERIIKMISNASSGEGAVCQTIRE STIMKAITGLNETVGLVLDFLQDAKDHGQRKGDDLLAAVRIVGSYLAEAPYACKEKIRHL LEFIFSVEGQDESSSFHSICFMLPMLSQITMEADGCRILASFGGYKMVIDCLIKMIEQNG MMIDTGNMFLACDTIINFLSNMKNAHIQMGSCFVGLLKALVSWTGTADDSSVIITASCLC TLVLDLTTEEFLLSSSDFDSKTLEKLSKLIARSLHQGIPDDDIEQSNQKQIILSGYRRWS DRYPRVKNILQQHVSV

Transcript Sequence

Transcript ID	Os02t0798700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:34000557:34007221:1 gene:Os02g0798700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Neurochondrin domain containing protein. (Os02t0798700-01)
Sequence	GGGAGGTTTCCATTCAAGACCAGTGCTCGCTGCGAGTCCCGACGCGGCGGCGGCGGCGGA GCCGCTCTCCTCACCCGCTCGCAATCGCTGCTCCGTTCGCCGCCTCACATCCATGGATTC CACCCCGGCTCCTGCCGCCGCCGCCGCGGAGACGCCGACCACCGCCCCGGCGTTCGAGGA ATGCCTCCGCCTCCTCCGCGGGGAGCGCGACGAGCAGAAGCTGGCGGGCCTCCTCGTCGC CGCCAACCTCTGCCGCGCCGGCGACGCCGCCTCCGTCGTCGAGGTGTACCGCGCCGTCGG GCCCCGGTTCCTCCGCCGCCTCCTCAACACCGGGCTGGGGAAAGTGGAGGGCGGCAAGGA GGAGGACAGGGAGGCGTACCTGCGTCTCTCGGTGACGGTGCTTTCCGGGCTTGCTCGATT CCCAGAGGTTGCCGCCGACGAGGGGGTCGTCTCCACTGTGCCCCTCATCGCCGAGATCGT CTCCAAATCGTCTGATCTGGCAATTACTGAAGAATGTTTTGAGCTCCTGTCTCTTATTGC AATAGCTTCAGATGGTGGGGCGCATACGTTTTGTGAACCTGGAGTGATGGATATGCTCTT CCTCCAAATCTCAAACTTCCCAGATGGTTCAAGGTGCTTAGAGCTTGCCATTCATCTAAT GCAGCTACTTGTTCATAAAATCAGAATAGACAACATGACCGTGGAGAAACTGCAAGGCAT GACAAGCATGGTGACCTCACTTGCTAGGCTTTTTGCTGTTCTTCATACTACAGTTAAATT TGAAGCGCTGCATATGCTTACCGCCCTTCTATCCCAAAAGGAATCTCCGCTTCATGACGC TTTGAGATCAGTACCTTCCATGATTTGGAAATGTCAAATTCGAGTTGGGATAACGGCCGT TCTCCAAAACCGTGTTGTATCTTCTGAAAAGTTGCAAGCTCTTCTTTTGGCGGAGTGCAT GATGTCTATACTTGGTGAGAATTGGCTGTCAGAAGAATACAAAGTCCCTGATGACCAGAA TATGATGCCTGTTGATAAATTTGTATTGCTTGTCCTAGAATCTGCAAGAATCGAAGTTTC TGTCCTTCTAAATGAGCTTGCTTATTTGAAGTATGAATCTTCAAAAAATTCCCAGAGAGA TGATGCCATCAGTCAGAAAGAGAGAAACCTGGCTATATTATTTTCACTAATAGAAAGAAT AATAAAAATGATATCAAATGCCAGTAGTGGGGAAGGTGCTGTATGTCAGACCATCCGTGA GAGCACCATCATGAAAGCAATTACAGGATTAAATGAGACAGTTGGCTTAGTTTTAGACTT TCTGCAGGACGCAAAGGATCATGGGCAAAGGAAAGGCGATGATCTTTTGGCGGCTGTGAG AATAGTAGGAAGTTATCTGGCAGAGGCACCATATGCCTGCAAGGAGAAGATTAGACATCT GCTGGAATTTATCTTCTCTGTTGAAGGGCAAGATGAATCAAGCTCATTCCATTCTATTTG TTTTATGCTTCCCATGCTATCACAAATAACAATGGAGGCTGATGGATGTAGAATTTTGGC ATCATTTGGAGGCTATAAAATGGTTATAGACTGCCTTATTAAAATGATCGAACAGAATGG AATGATGATTGACACTGGTAACATGTTTTTAGCATGTGATACCATCATAAACTTTTTGTC AAATATGAAAAATGCTCATATTCAAATGGGGTCTTGTTTTGTCGGCCTTCTAAAAGCACT TGTTTCATGGACTGGAACCGCCGATGATTCATCAGTTATCATAACAGCCTCCTGCTTATG CACGTTGGTGTTGGACTTAACAACAGAAGAGTTTTTATTGAGCAGCTCTGATTTTGATTC CAAGACACTTGAGAAGTTGTCAAAGCTCATTGCCAGAAGTTTGCATCAGGGCATTCCTGA CGACGACATAGAACAATCCAACCAAAAGCAAATCATACTATCAGGTTACAGGAGGTGGTC TGATAGATATCCACGTGTTAAAAACATCCTGCAGCAGCATGTTTCTGTGTGATTTTCTGC TTATGATTGCCGTCAATCTCTTGTCAAAAGAGAACCCACCCCCCCAGATACAAACCTTAA GTTAAAGTATACCCGTGCCTGATATTCTTCAATCTTAAGGGGTTTGCCAAATGCCAATGC ATTCTTTGTGGGTGCAAGCAATTATAGGTTACGGTAGTTCCTCCATGTAACAGCTAGATA GTACTACACCTAAACGGATGAGCAAGATGCCATTGTATACAGTGTCGCGTTGCTTGGCAG TGCACCATATTGGAAGGAGTAGATGCGAAGGGAAAATGTACATATTCACCTTTTGTCTGT TGTATCGACGAGTATTTTTTGTAATGGAAGGCTTTAATGTAGTGCAAATAACTCGCTTGA ATTTGTTTCGCTTGTGCGCACTTAATATGCAACTAATAGTTGATGAGTATTTGTGCATTT TCGAAAGATT