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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0798200-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:33976614:33978362:1 gene:Os02g0798200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os02t0798200-01)
Sequence

ATGGTACTGATGGCCGGGATGCTTCCCGGAGTGGAGTGCGCGCGGCGGCGACGTCTCCGG
CAGGGCGGCGGGGAGGCGCCGTGCGGGACGCGGCGGCCGTCATTGTGCCTGTACGCCGGC
GGCCACGACCACGCCCTCCTTGGCTCCTCCGCTTGTAAGCAGCAGAGGAGCGCGTGCGAG
GAGCAGCAGCCCGGGTGGTGGACGCTGGACAGCAACGTGCGGGAGGCGAAGGAGAGGCTG
GACCAGAAGCTGCGGAGCCAGAGGGAATCCGCCGTCGTCGTCGTCAAGAGGCATAACAAA
GCGCAGGTGGCAGGAACGAGCAGTGACGGCGGCGAGCAGTCAACGGCAACTACGGCGGCG
CCGCAGTGGGAGGTGTACACGAGGAAAGAAGGGCGGCGGCGGATGTGGTTCAGGAGGTTG
GGGCGGAGGCCGACGCCGGAGGAGGAGGAGGAGTGCGCGGTGTGTCTAGAGGAGCTGCGT
GCCGGGGAGGCGGTGGCGCACCTCCCCTGCACGCACCGCTTCCACTGGGGCTGCGCCGTG
CCATGGGTCCAGACCGCCTCCCGCTGCCCCGTCTGTCGCGCCGCCGTCTACCTCACCTCA
CCGGCGCCGGCGGCCAGCAACAACTACAACTAG

Peptide Sequence

PEP ID

Os02t0798200-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:33976614:33978362:1 gene:Os02g0798200 transcript:Os02t0798200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os02t0798200-01)
Sequence

MVLMAGMLPGVECARRRRLRQGGGEAPCGTRRPSLCLYAGGHDHALLGSSACKQQRSACE
EQQPGWWTLDSNVREAKERLDQKLRSQRESAVVVVKRHNKAQVAGTSSDGGEQSTATTAA
PQWEVYTRKEGRRRMWFRRLGRRPTPEEEEECAVCLEELRAGEAVAHLPCTHRFHWGCAV
PWVQTASRCPVCRAAVYLTSPAPAASNNYN

Transcript Sequence

Transcript ID

Os02t0798200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:33976614:33978362:1 gene:Os02g0798200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os02t0798200-01)
Sequence

ATGCGTTAGAGAGAGAGAGAGAGAGAGAGTGCATGAGCATGATGAGCTCTCCTTCTCCCT
CTCCTTAATTTAGACATAAACTTAATTAGCTATGCCGCTCCTCTCTCTAATCTCCCCTCC
AAAGATTATGGTTGGTAGGAGATGGATGAGTTCCTGATCATCTTCTTGCTCTAAAATGGA
AGGTTTCCAATGGATTCCAGCTTCTGAATCTTGCAGCTAGCTAGGTAGGTAGGTAGCTGG
TAGCTTAGCTAGGCAGTCAGGCAGATGGTGTGTTGTTGCTTCTGCTGTGATCGCTCGCAT
ACGTAGATAAGGTTAGAGGTTGATCGCTCGGTAGATGGTACTGATGGCCGGGATGCTTCC
CGGAGTGGAGTGCGCGCGGCGGCGACGTCTCCGGCAGGGCGGCGGGGAGGCGCCGTGCGG
GACGCGGCGGCCGTCATTGTGCCTGTACGCCGGCGGCCACGACCACGCCCTCCTTGGCTC
CTCCGCTTGTAAGCAGCAGAGGAGCGCGTGCGAGGAGCAGCAGCCCGGGTGGTGGACGCT
GGACAGCAACGTGCGGGAGGCGAAGGAGAGGCTGGACCAGAAGCTGCGGAGCCAGAGGGA
ATCCGCCGTCGTCGTCGTCAAGAGGCATAACAAAGCGCAGGTGGCAGGAACGAGCAGTGA
CGGCGGCGAGCAGTCAACGGCAACTACGGCGGCGCCGCAGTGGGAGGTGTACACGAGGAA
AGAAGGGCGGCGGCGGATGTGGTTCAGGAGGTTGGGGCGGAGGCCGACGCCGGAGGAGGA
GGAGGAGTGCGCGGTGTGTCTAGAGGAGCTGCGTGCCGGGGAGGCGGTGGCGCACCTCCC
CTGCACGCACCGCTTCCACTGGGGCTGCGCCGTGCCATGGGTCCAGACCGCCTCCCGCTG
CCCCGTCTGTCGCGCCGCCGTCTACCTCACCTCACCGGCGCCGGCGGCCAGCAACAACTA
CAACTAGCTAGACGGAAGCGGATCCTCCAACGTAAACTTTCTCCTGACGCGGTTACTGAT
ATGTGGACCCGTGAACGATGGGATCTATATGTCAGTCACATGTTCCTTTGACTTCCTAAT
CCCAACTAGACAGCTTATTAAACGGATCGCCAGTTCGCCGCTGCTAACTGTCACTGGTCA
CTACTACCCGCATCCTTTAATTTTGATTGATTCCATCAACTTAATTATATATCGTCGTTT
CCTCTCGCATCTCCTGGTCTCTCTCTACCATGCACATGTCGCCTGCCTATGCTACAGTAT
TATGTCTCGATCAAACTCTCTGTAATAGTGTACTTCCTCCGTTTAACAATGTAAGTTGTT
ATAGTATTTCTCACATTTATATATTTAGATTCATT