Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0798100-00
CDS Infomation

cds chromosome:IRGSP-1.0:2:33971301:33972910:1 gene:Os02g0798100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os02t0798100-00)
Sequence

ATGGCCACCGCGTCCTCGCACCACCGCGCGCGCCTCCGGTCCCGCGCCGCGCCGCTCCTC
GCCGTCGTCGTGCTCGCGGTCCTTGCGCTGACCGCCATCCTCCGCGCCAGCCGCCACGAC
TTCGTCCCGGGCGCGGCGCGCGCCGCCGCCGGAGTCGGCGGCGGCGGCAACAACCACACC
ATCGCGCAGCGCAAGATCCTGCTCGACCCGGACTTCACCCCGCGGCTCCCGCGCCAGAGC
GCGCTCTCCCTCTCCCTCTCCCAGCGGAACGCGCTCCCGCCCCGCAACGCCGACCGCTTC
CCCCGCCTCCCCGACGGCCACCTCAACATCGTCCTCTACGTCCACAACCGCCCCCGCTAC
CTCCGCCTCGTCGTCGACAGCCTCTCCCGCGCCCACGGCATCGGGGAGGCGCTGCTCATC
GTCAGCCACGACGGCTACTTCCCGGAGATGGACAAGATCGTGCAGACCATCACCTTCTGC
CAGGTCAAGCAGATCTTCGCGCCCTACTCGCCGCACCTCTTCCCGGAGGCCTTCCCCGGC
GTCTCCTCCGGTGACTGCCAGGGCAAGGACAAGGCGGCCGAGAAGCACTGCCAGGGCGAC
CCGGACCAGTACGGCAACCATCGCTCCCCGAGAATCGTCTCGCTCAAGCACCACTGGTGG
TGGATGATGAACACCGTGTGGGATGGGCTGGATGAGACCAGGGACTTCGATGGCCACATC
CTCTTCATCGAGGAGGATCATTACATCTTCCCCAATGCGTACCGCAATGCGCAGCTGCTT
GTCGACTTGAAGCCTAGCAAGTGTCCCCAGTGCTATGCTATAAACTTGGCGCCATCGGAT
GTCAAGGCGAAAGGGGAAGGTTGGGAGAGCTTGGTTGCCGAGAAGATGGGTAACATTGGC
TATGCCTTCAACAGGACAGTTTGGAGGAAGATTCATGCCAAAGCTAAGCAGTTCTGCACA
TTCGACGAGTACAATTGGGATATAACGATGTGGGCAACCGTGTATCCGTCGTTCGGATCT
CCTGTTTACAGCCTGAGGGGACCTAGGAGGAGCGCTGCACATTTCGGCAAGTGTGGCCTG
CACCAAGGCCAAGGCTTGAGCAATGTCTGTGTGGATAATGGCGACGCGACAGTACAATTA
GATGCCATCGATAAGGTCCCTAACATCAAAGCTAACTGGCCAGTACATATCATCAAGAGG
CAGGAGGGGTATCAGGCTGGCTTCAAAGGATGGGGTGGCTGGGGTGATAAGCGTGATCAG
GAGCTCTGTCTCAGTTTTGCATACATGCACCATTTTAAAGACCCATCATCTCCTTGA

Peptide Sequence

PEP ID

Os02t0798100-00
PEP Infomation

pep chromosome:IRGSP-1.0:2:33971301:33972910:1 gene:Os02g0798100 transcript:Os02t0798100-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os02t0798100-00)
Sequence

MATASSHHRARLRSRAAPLLAVVVLAVLALTAILRASRHDFVPGAARAAAGVGGGGNNHT
IAQRKILLDPDFTPRLPRQSALSLSLSQRNALPPRNADRFPRLPDGHLNIVLYVHNRPRY
LRLVVDSLSRAHGIGEALLIVSHDGYFPEMDKIVQTITFCQVKQIFAPYSPHLFPEAFPG
VSSGDCQGKDKAAEKHCQGDPDQYGNHRSPRIVSLKHHWWWMMNTVWDGLDETRDFDGHI
LFIEEDHYIFPNAYRNAQLLVDLKPSKCPQCYAINLAPSDVKAKGEGWESLVAEKMGNIG
YAFNRTVWRKIHAKAKQFCTFDEYNWDITMWATVYPSFGSPVYSLRGPRRSAAHFGKCGL
HQGQGLSNVCVDNGDATVQLDAIDKVPNIKANWPVHIIKRQEGYQAGFKGWGGWGDKRDQ
ELCLSFAYMHHFKDPSSP

Transcript Sequence

Transcript ID

Os02t0798100-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:33971301:33972910:1 gene:Os02g0798100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os02t0798100-00)
Sequence

CAGCAGCCAAGCCAACAACCGCACGGCTCGAGATCCGCCGCCGCCGCCGCCGCCGCCGCC
GCTGCCGCCATGGCCACCGCGTCCTCGCACCACCGCGCGCGCCTCCGGTCCCGCGCCGCG
CCGCTCCTCGCCGTCGTCGTGCTCGCGGTCCTTGCGCTGACCGCCATCCTCCGCGCCAGC
CGCCACGACTTCGTCCCGGGCGCGGCGCGCGCCGCCGCCGGAGTCGGCGGCGGCGGCAAC
AACCACACCATCGCGCAGCGCAAGATCCTGCTCGACCCGGACTTCACCCCGCGGCTCCCG
CGCCAGAGCGCGCTCTCCCTCTCCCTCTCCCAGCGGAACGCGCTCCCGCCCCGCAACGCC
GACCGCTTCCCCCGCCTCCCCGACGGCCACCTCAACATCGTCCTCTACGTCCACAACCGC
CCCCGCTACCTCCGCCTCGTCGTCGACAGCCTCTCCCGCGCCCACGGCATCGGGGAGGCG
CTGCTCATCGTCAGCCACGACGGCTACTTCCCGGAGATGGACAAGATCGTGCAGACCATC
ACCTTCTGCCAGGTCAAGCAGATCTTCGCGCCCTACTCGCCGCACCTCTTCCCGGAGGCC
TTCCCCGGCGTCTCCTCCGGTGACTGCCAGGGCAAGGACAAGGCGGCCGAGAAGCACTGC
CAGGGCGACCCGGACCAGTACGGCAACCATCGCTCCCCGAGAATCGTCTCGCTCAAGCAC
CACTGGTGGTGGATGATGAACACCGTGTGGGATGGGCTGGATGAGACCAGGGACTTCGAT
GGCCACATCCTCTTCATCGAGGAGGATCATTACATCTTCCCCAATGCGTACCGCAATGCG
CAGCTGCTTGTCGACTTGAAGCCTAGCAAGTGTCCCCAGTGCTATGCTATAAACTTGGCG
CCATCGGATGTCAAGGCGAAAGGGGAAGGTTGGGAGAGCTTGGTTGCCGAGAAGATGGGT
AACATTGGCTATGCCTTCAACAGGACAGTTTGGAGGAAGATTCATGCCAAAGCTAAGCAG
TTCTGCACATTCGACGAGTACAATTGGGATATAACGATGTGGGCAACCGTGTATCCGTCG
TTCGGATCTCCTGTTTACAGCCTGAGGGGACCTAGGAGGAGCGCTGCACATTTCGGCAAG
TGTGGCCTGCACCAAGGCCAAGGCTTGAGCAATGTCTGTGTGGATAATGGCGACGCGACA
GTACAATTAGATGCCATCGATAAGGTCCCTAACATCAAAGCTAACTGGCCAGTACATATC
ATCAAGAGGCAGGAGGGGTATCAGGCTGGCTTCAAAGGATGGGGTGGCTGGGGTGATAAG
CGTGATCAGGAGCTCTGTCTCAGTTTTGCATACATGCACCATTTTAAAGACCCATCATCT
CCTTGATGCAGGGTATAGGCACACGGATTTTGGCATAGCTGCCGCCTTGTTGTATTATTG
TTCGGTATCATTCATTCTTACACACGGTTCGATATAAATAGCAGTCTTCCCTTTCCCAAT
TTTGTAGAATAGCTCTTTCTTCCCAGTTGAAAGACATTGCTGTTAGAGTTGGATCAATAT
CCCAAACTGTATGACTTAAGTAGTTAAGCTCACAGATGTGGATAAAGTTT