Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0796300-02
CDS Infomation	cds chromosome:IRGSP-1.0:2:33854237:33855650:1 gene:Os02g0796300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CCR4-associated factor 1H, carbon cataboliterepressor 4-associated factor 1H, CCR4-associated factor 1-1 description:Component of the CCR4-NOTcomplex, Deadenylase, Deadenylation (poly(A) tail shortening), Heat stress response (Os02t0796300-01);Similar to CCR4-NOT transcription complex subunit 7 (CCR4-associated factor 1) (CAF1) (BTG1 binding factor 1). (Os02t0796300-02)
Sequence	ATGCCAATGTCGGATCCCACGGCGGCGGTCATCCCCAAGCCGGGGGGCATCGGCGTCGGC GGCGGAGGCGGCGACGACGAGGAGCCGGTGGAGATCCGGGAGGTGTGGGCGGACAACCTC GAGGAGGAGTTCGCGCTGATCCGCGACGTCGTCGACGAGTTCCCCTTCGTCGCCATGGAC ACGGAGTTCCCTGGCATCGTGTGCCGCCCCGTCGGCGCCTTCCGCTCCCCGGCCGACTAC AACTACGCCACGCTCAAGGCCAACGTCGACATGCTCCACCTCATCCAGCTCGGCCTCACC TTCTCCAGCCCGCGCGGCGAGCTCCCCGCGCTCGGCCCAGGCCGCCGCCGATGCGTATGG CAGTTTAATTTCCGCGAGTTCGACGACGCCCGCGACATCTTCGCCTCTGACTCCATTGAG CTCCTGCGCCGTAGCGGCATCGACTTCCGCCGCAACTCCGAGCGCGGCGTTGACGCTCGC CGGTTCGCGGAGCTGCTCATGTCCTCTGGCGTCGTGCTTAACGATTCTGTATATTGGGTC ACCTTCCACGCGGGCTACGACTTCGGGTACCTGCTTAAGATCCTCACATGCAGCAGCCTA CCGGACACGCAAGCCGGCTTCTTTAAGCTCATGAAGATATATTTCCCCACCGTGTATGAC ATCAAGCACCTCATGAAGTTCTGCAATAGCCTGCACGGTGGGCTGAACAAGCTCGCCGAG CTCCTTGACGTGGAGCGCGTCGGAGAGTCCCACCAGGCCGGTTCAGATAGCTTGGTCACT TCATGCGCGTTCTGGAAGCTCAAGGATTCGTTCTTCGCTGGCTCTACCGAGAAATATGCT GGAGTGCTGTATGGGCTCAATGCGGAGAATGTTGTCAGTGCGCATTGA

Peptide Sequence

PEP ID	Os02t0796300-02
PEP Infomation	pep chromosome:IRGSP-1.0:2:33854237:33855650:1 gene:Os02g0796300 transcript:Os02t0796300-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CCR4-associated factor 1H, carbon cataboliterepressor 4-associated factor 1H, CCR4-associated factor 1-1 description:Component of the CCR4-NOTcomplex, Deadenylase, Deadenylation (poly(A) tail shortening), Heat stress response (Os02t0796300-01);Similar to CCR4-NOT transcription complex subunit 7 (CCR4-associated factor 1) (CAF1) (BTG1 binding factor 1). (Os02t0796300-02)
Sequence	MPMSDPTAAVIPKPGGIGVGGGGGDDEEPVEIREVWADNLEEEFALIRDVVDEFPFVAMD TEFPGIVCRPVGAFRSPADYNYATLKANVDMLHLIQLGLTFSSPRGELPALGPGRRRCVW QFNFREFDDARDIFASDSIELLRRSGIDFRRNSERGVDARRFAELLMSSGVVLNDSVYWV TFHAGYDFGYLLKILTCSSLPDTQAGFFKLMKIYFPTVYDIKHLMKFCNSLHGGLNKLAE LLDVERVGESHQAGSDSLVTSCAFWKLKDSFFAGSTEKYAGVLYGLNAENVVSAH

Transcript Sequence

Transcript ID	Os02t0796300-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:33854237:33855650:1 gene:Os02g0796300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CCR4-associated factor 1H, carbon cataboliterepressor 4-associated factor 1H, CCR4-associated factor 1-1 description:Component of the CCR4-NOTcomplex, Deadenylase, Deadenylation (poly(A) tail shortening), Heat stress response (Os02t0796300-01);Similar to CCR4-NOT transcription complex subunit 7 (CCR4-associated factor 1) (CAF1) (BTG1 binding factor 1). (Os02t0796300-02)
Sequence	GTTTCGATTCGTCTCGCCCAAATCTTCAAATCCAAATCCGCAGCGGAGGCGGCCGGGGCG CGGCGGCCAGATCCTGGAAGAGAATCCATTCCGGGAGGGGAATCCGCGCATGCCAATGTC GGATCCCACGGCGGCGGTCATCCCCAAGCCGGGGGGCATCGGCGTCGGCGGCGGAGGCGG CGACGACGAGGAGCCGGTGGAGATCCGGGAGGTGTGGGCGGACAACCTCGAGGAGGAGTT CGCGCTGATCCGCGACGTCGTCGACGAGTTCCCCTTCGTCGCCATGGACACGGAGTTCCC TGGCATCGTGTGCCGCCCCGTCGGCGCCTTCCGCTCCCCGGCCGACTACAACTACGCCAC GCTCAAGGCCAACGTCGACATGCTCCACCTCATCCAGCTCGGCCTCACCTTCTCCAGCCC GCGCGGCGAGCTCCCCGCGCTCGGCCCAGGCCGCCGCCGATGCGTATGGCAGTTTAATTT CCGCGAGTTCGACGACGCCCGCGACATCTTCGCCTCTGACTCCATTGAGCTCCTGCGCCG TAGCGGCATCGACTTCCGCCGCAACTCCGAGCGCGGCGTTGACGCTCGCCGGTTCGCGGA GCTGCTCATGTCCTCTGGCGTCGTGCTTAACGATTCTGTATATTGGGTCACCTTCCACGC GGGCTACGACTTCGGGTACCTGCTTAAGATCCTCACATGCAGCAGCCTACCGGACACGCA AGCCGGCTTCTTTAAGCTCATGAAGATATATTTCCCCACCGTGTATGACATCAAGCACCT CATGAAGTTCTGCAATAGCCTGCACGGTGGGCTGAACAAGCTCGCCGAGCTCCTTGACGT GGAGCGCGTCGGAGAGTCCCACCAGGCCGGTTCAGATAGCTTGGTCACTTCATGCGCGTT CTGGAAGCTCAAGGATTCGTTCTTCGCTGGCTCTACCGAGAAATATGCTGGAGTGCTGTA TGGGCTCAATGCGGAGAATGTTGTCAGTGCGCATTGATGGATGGTACTCCTCTTTGAATT TTAGCTTTGTGAATGGATTGATTTAGGACAGAAAATGTGACAAATGATCAAGATGATGTT ATGTAGGTCAAGTTTGTCTCACTCCATTTGGGTTTAATGTGATCCTAGTGTTCTTCAGTT ATTCGCGATGAAATAGTGAACTGTATTTATGTTAAGTTGTTCTGTCCGCTTTCATTTTCT CCTACCTGGTTTAGTTAGATAGGAAAGAAAAATCACCTTTAAGGATTAGGAGATGGTAAA ATGAATATATTTTGTTGCTGTTTTGTCATTGATATGTATAGCATGGAAGCTGGTTGTTTC CAAAGAGTGGGGTGCGGGTACATCAAAGTGCTCAAACATGTAACTTGATAACATTACAAT ACAATACACAGAGCGCGACCTCTCTTCACATGGG