Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0795000-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:33797366:33803760:1 gene:Os02g0795000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family protein. (Os02t0795000-01)
Sequence	ATGATGGGGGAGGCGGAGGAGGGGCTGATGCACAGGAGGATTGAGTTCCACGCGGCGAGG AGGCCGCCGCGTGCGGTGGAGGGGGCGGGAGGGAGGTTTTGGGTGGAGATCCTGAGCCCG GATGCCGATAAGGCGGCGGTGGTGGCGGCGGCGAGGAGCGAGGGGCTGGTCAGGGGGTTG GAGAAGGGGGAGGGTAGCGGGGGTGGGATCGACCCGGAGCTTCGCGTCGCGAGGATGTAC TTGCGGAGAATTGGAGCTGGCTTGCAAAATTTTGGCAATACCTGCTACCTCAACTCGGTT CTGCAATGCTTGACGTATACCGAGCCGTTCGTGGCCTACTTGCAGAGTGGGGAGCACATG TCCTCATGTCGGACTATCGGATTCTGTGCTTTATGTGCTCTTCAAAGACATGTAAATTCT GCTCTACAGTCAACTGGGAAGATATTGAGACCTGTGCACATTGTCAGAAATTTAAGATGC ATTTCTCGTAGTTTCCGCATCTCAAGGCAGGAAGACGCACATGAGCTAATGGTTAGCTTG CTTGAGTCCATGCACAAATGTTGTTTACCTTCTGGTGTACCAAGTGGGTCGCCAAGTGCT TATGAGAAGAGCCTAGTTCACAGAATATTTGGTGGTCTCTTAAGAAGTCAGGTGAGATGC ACAACTTGCTCACACTGTTCCAACAAATTTGATCCTTTCCTGGATCTCAGCCTTGAAATT GCCAATGCTGCTACTCTGGTAAAAGCACTTCAACACTTTACTGCGGAAGAGCTACTGGAT GGTGGGGAAAAGCAGTACAACTGCGAGCACTGCAGGCAGAAAGTAGTAGCCAAGAAGAGG TTTATGATTGAGAAGGCTCCCTCTGTGTTGACAATTCATCTAAAGCGCTTTAGTCCTTTC AACCCTCGTCACAAGATCGACAAAAAAGTGCAGTTTCAACCAACTTTAAATTTAAAGCCA TATGTCAGCAATCCTGAGGGTATGGAGTTCAAATACAGCCTTTATGGTGTTTTGGTTCAT GCTGGTTGGAATACACAGTCAGGTCACTATTATTGCTTTGTTCGGACTTCTAGTGGCATA TGGCACAATCTTGATGATAACAAGGTTTACCAAGTTCGTGAGGCAGATGTGCTGAGGCAG AAAGCATACATGCTATTTTATGTGCGCGACAGAACAAGGAGCTCAGTGATGTACAGTGAT AATTGTACTGTTAATTTATCAGTAAATAAAATGATCTCCGAGAAGATCACATGTATGAAT GGTTCAATTAAAAAAGATACAGTGGAAACGAAAACACTGAGAGTTCCCTCACTTGTCAAA GAAGATGTGAACTTGAAGAAACAGAACTCAGAAAATGGTCAATCTAGCAATATTAGCAAT GCTCCACAGGACCAGTGTTCAAAAAGTCATAGCAACACTGAAGTGCTTGAAGCTGCAGCA TCCCCAAACAATGACCCAGCTTCAACACAGAAAGCTTCTTGCATACGTCCAGATACAGCT GCTGTTAACTTGCCCATGAAAACAGAGCAAACAGCTCCAGACAATCGAAGGGAAATAACA TCTCCAGCACAAGCTGATGTTTCTGTTCTTCACAATGCAAGTTTCAATCAGAAGTTGTAT GAGAAGCAGCTACAGGAGCATCAACTAGAAACTGATGATGCACTTACTGATTCCAGGAAA GATGCCCCTGCTGCCTTGTGCACATATGGTGTTGGGGATGGTTTGTTGGGGAGAAATGGC CAGTCTTCTGAACCTCACATAGGTCCATGCCCTGCTGCTCTTCCTATACACAATGGTGGT GAAGGATTGCTGGGGGCAAATGGCCAGGCATCTGAAGCTCACTCAGGTCCTTGCTCTTCT GCCTTTCCTATACATAATGGTGGCGAAGGATTGTTGGGGGCAAGTGGCCAGTCTTCTGAA CCTCACACAGGTCCATGCCCTGCTGCTCTTCCTATACACGATGGTGGTCAAGGATTATTG GGGCCAAATGGCCAGGCTTCTGAACCTCACACAGATTCTTGCCCTGCTGCCTTTCCTATA CACAGTGGCGGTGAAGGACTGTTGGGGGCAAATGGTCAGGCTTCTGAACTTCACACAGAT CCTTGCCCTGCTGCCTTTCCTATACACAGTGGCGGTGAAGGATTGTTGGGGGCAAATGGT CAGGCTTCTGAACCTCACACAGATCCTTGCCCTGCTGCCTTTCCTATACACAGTGCCGGT GAAGGATTGTTGGGGGCAAATGGCCAGGATTCTGAACATCGAACAGGTCCAATCCCTGCT GCCTTTCCTGTATGGAATGGCACTGGTGTAATATTGGAGAAATATGGTCAGGTTTCTGGG CCAGCAGATCCATTTTGCAAGCCAACTCCTACCATAAGTGATACAGTGTCTATTGCACAA ATCATCCCAACTGAGCATGCTGCTGTTTCTAATGGAACAGTATCTAGTAGTGATGATTTA ACTGGCAATACTGAAGCTAACGAGTCATCAGAGTTTGTAAAGAATTACGGCGAACAAGTT ATGGTGAGGGATCTTTCTGCAGAGACCTCTGGTGATAGAGCAAATGCAGATGAGCAGACT TCAATGCAGAATAACACACTGGAAGTTGGTAAGGATGTTGCAAAGGACACTGATAATGTG GCAAATGCCGAGGAGCAGGTATTGAACCACCCCTTGGCCGAGCAGGTAAAATCTGAGAAG CAAATATATCCTGGAATTTCTACAACATTGATTTGCTCTGAAGACACAACACAGTTGATA GATAAGGATACAGGCAGTGGCAAATTAAATAAAAAGATGAATTGCAAGTCAAAGAGGCAA GTGAAGTATCCTGCTGTTCGCATGTTTTTTGGGCCCAAACAACTGTTACTGGCATCAGTA AAACTGCACAAGAAAAGGAAACACAAGAGATCCAAAAAACACCATGCACTTTCTGTGCAC ATTGAAAGCATCATCACTGATCAGCAGACATCAACATCAGAAACTGTTTTCTCAAAGATC ATATCACATAAATCCCGTGGACAGAAACGTTCTTGTGCCAGTGCAAGTTCTGAGGATGGC ACTCAGCTGTTCAACAAGAAACAGCATATCGAAGGAACCACCAACAGTGTTCCCATGGAC AACAACGATACAAAACTTGCTAGCGCTGACAGCAACGATGCAAAACTTGCTAGCGCCGAG CTACCAAGCTCATGTACAAACTCTCTGGTGAACCAGACTGATTCAAGAAACAATGTAAAT GCAAATGAGAGAGGCCCCTGGCATTTTAATCTCCTCACAAGGGGTTTAAGAGAAATTACT GTGCCACGTTGGGATGACACTGAGATTAAAAATACGAAGGAAACAGAGATACTACATCCA AGGACTAGAAGCATCGGCTATGTGCTAGATGAATGGGACGAGGAGTATGATCGCGGCAAG AGAAAGAAGATCAGGAAACCAAAGCATGGCTTCAGTGGGCCGAACCCTTTCCAGGAGACG GCCAACATCAGATCACGGCAGAGGATGAGACTACAGTCTGACCAGACCAAATCTGGGAAC CAGCCTCTCAGGATATAA

Peptide Sequence

PEP ID	Os02t0795000-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:33797366:33803760:1 gene:Os02g0795000 transcript:Os02t0795000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family protein. (Os02t0795000-01)
Sequence	MMGEAEEGLMHRRIEFHAARRPPRAVEGAGGRFWVEILSPDADKAAVVAAARSEGLVRGL EKGEGSGGGIDPELRVARMYLRRIGAGLQNFGNTCYLNSVLQCLTYTEPFVAYLQSGEHM SSCRTIGFCALCALQRHVNSALQSTGKILRPVHIVRNLRCISRSFRISRQEDAHELMVSL LESMHKCCLPSGVPSGSPSAYEKSLVHRIFGGLLRSQVRCTTCSHCSNKFDPFLDLSLEI ANAATLVKALQHFTAEELLDGGEKQYNCEHCRQKVVAKKRFMIEKAPSVLTIHLKRFSPF NPRHKIDKKVQFQPTLNLKPYVSNPEGMEFKYSLYGVLVHAGWNTQSGHYYCFVRTSSGI WHNLDDNKVYQVREADVLRQKAYMLFYVRDRTRSSVMYSDNCTVNLSVNKMISEKITCMN GSIKKDTVETKTLRVPSLVKEDVNLKKQNSENGQSSNISNAPQDQCSKSHSNTEVLEAAA SPNNDPASTQKASCIRPDTAAVNLPMKTEQTAPDNRREITSPAQADVSVLHNASFNQKLY EKQLQEHQLETDDALTDSRKDAPAALCTYGVGDGLLGRNGQSSEPHIGPCPAALPIHNGG EGLLGANGQASEAHSGPCSSAFPIHNGGEGLLGASGQSSEPHTGPCPAALPIHDGGQGLL GPNGQASEPHTDSCPAAFPIHSGGEGLLGANGQASELHTDPCPAAFPIHSGGEGLLGANG QASEPHTDPCPAAFPIHSAGEGLLGANGQDSEHRTGPIPAAFPVWNGTGVILEKYGQVSG PADPFCKPTPTISDTVSIAQIIPTEHAAVSNGTVSSSDDLTGNTEANESSEFVKNYGEQV MVRDLSAETSGDRANADEQTSMQNNTLEVGKDVAKDTDNVANAEEQVLNHPLAEQVKSEK QIYPGISTTLICSEDTTQLIDKDTGSGKLNKKMNCKSKRQVKYPAVRMFFGPKQLLLASV KLHKKRKHKRSKKHHALSVHIESIITDQQTSTSETVFSKIISHKSRGQKRSCASASSEDG TQLFNKKQHIEGTTNSVPMDNNDTKLASADSNDAKLASAELPSSCTNSLVNQTDSRNNVN ANERGPWHFNLLTRGLREITVPRWDDTEIKNTKETEILHPRTRSIGYVLDEWDEEYDRGK RKKIRKPKHGFSGPNPFQETANIRSRQRMRLQSDQTKSGNQPLRI

Transcript Sequence

Transcript ID	Os02t0795000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:33797366:33803760:1 gene:Os02g0795000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family protein. (Os02t0795000-01)
Sequence	GCCGAGGCGAAAAATCACACTATCCAATCCCAAAATCGATCGAAGCCGCAGGTTTTAATC CGAGAAATTGCCCCGAAAATCCGGTGATCCTCCGATCCGTGCGAGCGCGAAAACCCTATG ATGGGGGAGGCGGAGGAGGGGCTGATGCACAGGAGGATTGAGTTCCACGCGGCGAGGAGG CCGCCGCGTGCGGTGGAGGGGGCGGGAGGGAGGTTTTGGGTGGAGATCCTGAGCCCGGAT GCCGATAAGGCGGCGGTGGTGGCGGCGGCGAGGAGCGAGGGGCTGGTCAGGGGGTTGGAG AAGGGGGAGGGTAGCGGGGGTGGGATCGACCCGGAGCTTCGCGTCGCGAGGATGTACTTG CGGAGAATTGGAGCTGGCTTGCAAAATTTTGGCAATACCTGCTACCTCAACTCGGTTCTG CAATGCTTGACGTATACCGAGCCGTTCGTGGCCTACTTGCAGAGTGGGGAGCACATGTCC TCATGTCGGACTATCGGATTCTGTGCTTTATGTGCTCTTCAAAGACATGTAAATTCTGCT CTACAGTCAACTGGGAAGATATTGAGACCTGTGCACATTGTCAGAAATTTAAGATGCATT TCTCGTAGTTTCCGCATCTCAAGGCAGGAAGACGCACATGAGCTAATGGTTAGCTTGCTT GAGTCCATGCACAAATGTTGTTTACCTTCTGGTGTACCAAGTGGGTCGCCAAGTGCTTAT GAGAAGAGCCTAGTTCACAGAATATTTGGTGGTCTCTTAAGAAGTCAGGTGAGATGCACA ACTTGCTCACACTGTTCCAACAAATTTGATCCTTTCCTGGATCTCAGCCTTGAAATTGCC AATGCTGCTACTCTGGTAAAAGCACTTCAACACTTTACTGCGGAAGAGCTACTGGATGGT GGGGAAAAGCAGTACAACTGCGAGCACTGCAGGCAGAAAGTAGTAGCCAAGAAGAGGTTT ATGATTGAGAAGGCTCCCTCTGTGTTGACAATTCATCTAAAGCGCTTTAGTCCTTTCAAC CCTCGTCACAAGATCGACAAAAAAGTGCAGTTTCAACCAACTTTAAATTTAAAGCCATAT GTCAGCAATCCTGAGGGTATGGAGTTCAAATACAGCCTTTATGGTGTTTTGGTTCATGCT GGTTGGAATACACAGTCAGGTCACTATTATTGCTTTGTTCGGACTTCTAGTGGCATATGG CACAATCTTGATGATAACAAGGTTTACCAAGTTCGTGAGGCAGATGTGCTGAGGCAGAAA GCATACATGCTATTTTATGTGCGCGACAGAACAAGGAGCTCAGTGATGTACAGTGATAAT TGTACTGTTAATTTATCAGTAAATAAAATGATCTCCGAGAAGATCACATGTATGAATGGT TCAATTAAAAAAGATACAGTGGAAACGAAAACACTGAGAGTTCCCTCACTTGTCAAAGAA GATGTGAACTTGAAGAAACAGAACTCAGAAAATGGTCAATCTAGCAATATTAGCAATGCT CCACAGGACCAGTGTTCAAAAAGTCATAGCAACACTGAAGTGCTTGAAGCTGCAGCATCC CCAAACAATGACCCAGCTTCAACACAGAAAGCTTCTTGCATACGTCCAGATACAGCTGCT GTTAACTTGCCCATGAAAACAGAGCAAACAGCTCCAGACAATCGAAGGGAAATAACATCT CCAGCACAAGCTGATGTTTCTGTTCTTCACAATGCAAGTTTCAATCAGAAGTTGTATGAG AAGCAGCTACAGGAGCATCAACTAGAAACTGATGATGCACTTACTGATTCCAGGAAAGAT GCCCCTGCTGCCTTGTGCACATATGGTGTTGGGGATGGTTTGTTGGGGAGAAATGGCCAG TCTTCTGAACCTCACATAGGTCCATGCCCTGCTGCTCTTCCTATACACAATGGTGGTGAA GGATTGCTGGGGGCAAATGGCCAGGCATCTGAAGCTCACTCAGGTCCTTGCTCTTCTGCC TTTCCTATACATAATGGTGGCGAAGGATTGTTGGGGGCAAGTGGCCAGTCTTCTGAACCT CACACAGGTCCATGCCCTGCTGCTCTTCCTATACACGATGGTGGTCAAGGATTATTGGGG CCAAATGGCCAGGCTTCTGAACCTCACACAGATTCTTGCCCTGCTGCCTTTCCTATACAC AGTGGCGGTGAAGGACTGTTGGGGGCAAATGGTCAGGCTTCTGAACTTCACACAGATCCT TGCCCTGCTGCCTTTCCTATACACAGTGGCGGTGAAGGATTGTTGGGGGCAAATGGTCAG GCTTCTGAACCTCACACAGATCCTTGCCCTGCTGCCTTTCCTATACACAGTGCCGGTGAA GGATTGTTGGGGGCAAATGGCCAGGATTCTGAACATCGAACAGGTCCAATCCCTGCTGCC TTTCCTGTATGGAATGGCACTGGTGTAATATTGGAGAAATATGGTCAGGTTTCTGGGCCA GCAGATCCATTTTGCAAGCCAACTCCTACCATAAGTGATACAGTGTCTATTGCACAAATC ATCCCAACTGAGCATGCTGCTGTTTCTAATGGAACAGTATCTAGTAGTGATGATTTAACT GGCAATACTGAAGCTAACGAGTCATCAGAGTTTGTAAAGAATTACGGCGAACAAGTTATG GTGAGGGATCTTTCTGCAGAGACCTCTGGTGATAGAGCAAATGCAGATGAGCAGACTTCA ATGCAGAATAACACACTGGAAGTTGGTAAGGATGTTGCAAAGGACACTGATAATGTGGCA AATGCCGAGGAGCAGGTATTGAACCACCCCTTGGCCGAGCAGGTAAAATCTGAGAAGCAA ATATATCCTGGAATTTCTACAACATTGATTTGCTCTGAAGACACAACACAGTTGATAGAT AAGGATACAGGCAGTGGCAAATTAAATAAAAAGATGAATTGCAAGTCAAAGAGGCAAGTG AAGTATCCTGCTGTTCGCATGTTTTTTGGGCCCAAACAACTGTTACTGGCATCAGTAAAA CTGCACAAGAAAAGGAAACACAAGAGATCCAAAAAACACCATGCACTTTCTGTGCACATT GAAAGCATCATCACTGATCAGCAGACATCAACATCAGAAACTGTTTTCTCAAAGATCATA TCACATAAATCCCGTGGACAGAAACGTTCTTGTGCCAGTGCAAGTTCTGAGGATGGCACT CAGCTGTTCAACAAGAAACAGCATATCGAAGGAACCACCAACAGTGTTCCCATGGACAAC AACGATACAAAACTTGCTAGCGCTGACAGCAACGATGCAAAACTTGCTAGCGCCGAGCTA CCAAGCTCATGTACAAACTCTCTGGTGAACCAGACTGATTCAAGAAACAATGTAAATGCA AATGAGAGAGGCCCCTGGCATTTTAATCTCCTCACAAGGGGTTTAAGAGAAATTACTGTG CCACGTTGGGATGACACTGAGATTAAAAATACGAAGGAAACAGAGATACTACATCCAAGG ACTAGAAGCATCGGCTATGTGCTAGATGAATGGGACGAGGAGTATGATCGCGGCAAGAGA AAGAAGATCAGGAAACCAAAGCATGGCTTCAGTGGGCCGAACCCTTTCCAGGAGACGGCC AACATCAGATCACGGCAGAGGATGAGACTACAGTCTGACCAGACCAAATCTGGGAACCAG CCTCTCAGGATATAATTGATATACTGGAGCAGCAACCTGTTGTTGTATCCTTCAGTTTTG GAACAGTAACTACTTCTCTAGTAGAACTATTATCCTCCCCATGTTTTTTTTTTCAGTTAT GTGTAGTGTCATCAGAGAGTAAGATTTAGGCCTCATGGCTCAGTCATTTGTCTGATTGAT TAGCCGAGGAACGAAGCGGACTCTTGTTTGTTGTCCCATTTCTGTCGAGCTTATCATGCC AATTTTTTTTTACGTCAATGCATTCACACGTGTTATTCATCC