Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0792900-03
CDS Infomation	cds chromosome:IRGSP-1.0:2:33690863:33694051:-1 gene:Os02g0792900 gene_biotype:protein_coding transcript_biotype:protein_coding description:TMS membrane protein/tumour differentially expressed protein family protein. (Os02t0792900-01);TMS membrane protein/tumour differentially expressed protein family protein. (Os02t0792900-03)
Sequence	ATGTGGGCGGCGTCTTGCCTGGCGTCGTGCTGCGCCGCGTGCGCGTGCGAGGCGTGCCGT ACGGCGGTCGGCAGCATCGGCCGCCGCTCCGCCCGCATCGCCTACTGCGGCCTCTTCGCG CTCTCCCTCTTCGCCTCCTGGGCGCTCCGCGAGGTCGCCGCGCCCCTCCTCCAATCCATC CCATGGATTAACCACTTCCACAAGACGCCCGACCGCGAGTGGTTCGAGACCGATGCCGTG CTTAGGGTTAGCCTCGGCAACTTCGTCTTCTTCACCATCCTCGCCATCATCATGGCTGGC ATCAAGGACCAGAAGGACCCCCGCGACAAGATACACCATGGCGGATGGATGGCCAAGATA TTCTGCTGGGTTGTCATCGTCTTCCTCATGTTCTTCGTGCCCAACGGCGTCGTAAGCTTC TACGAATCAATATCCAAGTTTGGATCTGGACTGTTCCTGCTTGTTCAGGTTGTTCTTTTG TTGGACTTTGTTCATGGATGGAACGAGAATTGGGTTGCCAAGGATGAACAGTTCTGGTAC ATGGCTCTATTGGTTGTCTCAGTTGTCTGTTACATTGTCACATTCTCTTTCTCGGGTCTG CTCTTTCACTGGTTCACTCCATCTGGACATGACTGCGGAATCAATCTGTTCTTCATTGTC TTCACACTGATTCTTGTTTTTGTTTTTGCTATTGTCGCCCTGCACCCAAAGATCAATGGT AGCTTGCTGCCAGCATCAGTTATCGCCCTCTACTGCACCTATTTGTGCTACAGTGGACTT TCAAGTGAGCCGAGGGATTATGAATGCAATGGACTGCACAACCATTCCAAAGCTGTGTCG ACTGGTAGCCTTTCGCTGGGATTGCTAACCACCATCCTTTCTGTGGTCTATTCGGCTGTC CGTGCTGGCTCATCTGCAACTGTGCTCTCAGCCCCAGACTCACCACGTGCTGGTGCCGAC AAGCCACTGCTTCCTTTCAGTAAGGCAGATGAGGAAGCGGAAAAGAAGGATGTGCCAAGG CCAGTGACATACTCCTACTCGTTCTTCCACCTCATCTTCTCCTTGGCAAGCATGTACTCC GCGATGCTCTTGACTGGCTGGTCAACCTCAGTTGGTGAGAGTGGAAAGCTTGTTGACGTT GGGTGGCCATCCGTTTGGGTCAGGATTGCAACCCAGTGGGCAACGGCAGGTCTGTACATT TGGTCCCTTGTCGCCCCACTCCTCTTCCCCGATAGGGAATTCTAG

Peptide Sequence

PEP ID	Os02t0792900-03
PEP Infomation	pep chromosome:IRGSP-1.0:2:33690863:33694051:-1 gene:Os02g0792900 transcript:Os02t0792900-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:TMS membrane protein/tumour differentially expressed protein family protein. (Os02t0792900-01);TMS membrane protein/tumour differentially expressed protein family protein. (Os02t0792900-03)
Sequence	MWAASCLASCCAACACEACRTAVGSIGRRSARIAYCGLFALSLFASWALREVAAPLLQSI PWINHFHKTPDREWFETDAVLRVSLGNFVFFTILAIIMAGIKDQKDPRDKIHHGGWMAKI FCWVVIVFLMFFVPNGVVSFYESISKFGSGLFLLVQVVLLLDFVHGWNENWVAKDEQFWY MALLVVSVVCYIVTFSFSGLLFHWFTPSGHDCGINLFFIVFTLILVFVFAIVALHPKING SLLPASVIALYCTYLCYSGLSSEPRDYECNGLHNHSKAVSTGSLSLGLLTTILSVVYSAV RAGSSATVLSAPDSPRAGADKPLLPFSKADEEAEKKDVPRPVTYSYSFFHLIFSLASMYS AMLLTGWSTSVGESGKLVDVGWPSVWVRIATQWATAGLYIWSLVAPLLFPDREF

Transcript Sequence

Transcript ID	Os02t0792900-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:33690863:33694051:-1 gene:Os02g0792900 gene_biotype:protein_coding transcript_biotype:protein_coding description:TMS membrane protein/tumour differentially expressed protein family protein. (Os02t0792900-01);TMS membrane protein/tumour differentially expressed protein family protein. (Os02t0792900-03)
Sequence	AAATCCGAACAAGCCAAAGCCATCGTCGAGCTCCTTCACCCACCGATCGATTCGATCTGA CCGCGCCGCCGCAAGGGAGGAGGAGGAGGAGGACGACGAGCAGCAGCCATGTGGGCGGCG TCTTGCCTGGCGTCGTGCTGCGCCGCGTGCGCGTGCGAGGCGTGCCGTACGGCGGTCGGC AGCATCGGCCGCCGCTCCGCCCGCATCGCCTACTGCGGCCTCTTCGCGCTCTCCCTCTTC GCCTCCTGGGCGCTCCGCGAGGTCGCCGCGCCCCTCCTCCAATCCATCCCATGGATTAAC CACTTCCACAAGACGCCCGACCGCGAGTGGTTCGAGACCGATGCCGTGCTTAGGGTTAGC CTCGGCAACTTCGTCTTCTTCACCATCCTCGCCATCATCATGGCTGGCATCAAGGACCAG AAGGACCCCCGCGACAAGATACACCATGGCGGATGGATGGCCAAGATATTCTGCTGGGTT GTCATCGTCTTCCTCATGTTCTTCGTGCCCAACGGCGTCGTAAGCTTCTACGAATCAATA TCCAAGTTTGGATCTGGACTGTTCCTGCTTGTTCAGGTTGTTCTTTTGTTGGACTTTGTT CATGGATGGAACGAGAATTGGGTTGCCAAGGATGAACAGTTCTGGTACATGGCTCTATTG GTTGTCTCAGTTGTCTGTTACATTGTCACATTCTCTTTCTCGGGTCTGCTCTTTCACTGG TTCACTCCATCTGGACATGACTGCGGAATCAATCTGTTCTTCATTGTCTTCACACTGATT CTTGTTTTTGTTTTTGCTATTGTCGCCCTGCACCCAAAGATCAATGGTAGCTTGCTGCCA GCATCAGTTATCGCCCTCTACTGCACCTATTTGTGCTACAGTGGACTTTCAAGTGAGCCG AGGGATTATGAATGCAATGGACTGCACAACCATTCCAAAGCTGTGTCGACTGGTAGCCTT TCGCTGGGATTGCTAACCACCATCCTTTCTGTGGTCTATTCGGCTGTCCGTGCTGGCTCA TCTGCAACTGTGCTCTCAGCCCCAGACTCACCACGTGCTGGTGCCGACAAGCCACTGCTT CCTTTCAGTAAGGCAGATGAGGAAGCGGAAAAGAAGGATGTGCCAAGGCCAGTGACATAC TCCTACTCGTTCTTCCACCTCATCTTCTCCTTGGCAAGCATGTACTCCGCGATGCTCTTG ACTGGCTGGTCAACCTCAGTTGGTGAGAGTGGAAAGCTTGTTGACGTTGGGTGGCCATCC GTTTGGGTCAGGATTGCAACCCAGTGGGCAACGGCAGGTCTGTACATTTGGTCCCTTGTC GCCCCACTCCTCTTCCCCGATAGGGAATTCTAGATGAACCAGCGTAAGTACTCAACTGCT GAGATCGCATCCTTTTGGAGCATCATCTATCTTGTCAAGCTTATTTGCAAATAGCTAAGC CGTCTCTCTATGTGTGGTCTGTAATATTAACCGTGCGTAAACCAGTGGCAAGAAGTCCCT GTCCGTGTCATGGTTATCGAGTCTGTCTACTTAATAACGTGTGATACCAGGCATTGTGCC TGTATTTTAACAGTAAAAATTGGGT