Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0790600-02
CDS Infomation	cds chromosome:IRGSP-1.0:2:33579602:33581210:-1 gene:Os02g0790600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RING-H2 finger protein ATL1R (RING-H2 finger protein ATL8). (Os02t0790600-01);Similar to RING-H2 finger protein ATL1R (RING-H2 finger protein ATL8). (Os02t0790600-02)
Sequence	ATGAGCAATTCGACGTGGCAGCCGTCGCCGCCGCAGACTCCGGCGGCGGCGGCGTCGTCG GCGTCGGGGATTGACGGCGTGGAGAACAAGATAAGCCCGAGCATCGTGTTCATCGTGGCC GTCTTGGCGATCGTGTTCTTCGTGTGCGGGCTGCTGCACCTGCTGGTGCGGCACCTGCTG CGGCTGCACCGGCAGCGGAGGGCGAGGGAGGACGCCGAGAGCGCGACGGCGTTCGAGGGG CAGCTGCAGCAGCTGTTCCACCTCCACGACGCCGGCGTCGACCAGGCCTTCATCGACGCG CTCCCGGTGTTCCTGTACCGGAACGTCGTCGGCGTCGGCGGCGAGGATGGCAAGGACCCG TTCGACTGCGCTGTCTGCCTGTGCGAGTTCGCCGCCGACGACCAGCTCCGGCTGCTGCCC AAGTGCAGCCACGCGTTCCACCTCGAGTGCATCGACACCTGGCTCCTCTCCCACTCCACC TGCCCGCTCTGCCGGAGGAGCCTCCTCGCCGAGCTCTCGCCGACGTGCACCCCCGTCGTC ATGGTGCTCGAGTCCGAGAGCTCCCGCGACATGGTCCACGCCGCCGACGATGAGCCAGCC GACGTCGGTGGCGAAGACGCGCCGGGAGCGGAGGAGGTGGTCGAGGTGAAGCTTGGGAAG TTCATGTGCGTCGAAGGCAACGTCTTCTTCAACGTCAACGCCATCGCCGGCGAAGGGGAT AGAGCCGGCACGAGCAGCAACGGCAATGGCGACGCCAATGCCAAGGCTGGTGGTCTCGGG CAAAGACGGTGCCATTCCATGGGATCCTACGAGTACGTCATGGACGCGCACGCCTCCCTC CGCGTGTCCATCAAGCCGCCGAGGAAGAAGCCGGCGGCGGCGGCCTCCAAGTCGCGCCGC CGCGGCGCCATGTCGGAGTGCGAGTTCGGCGCCTCCAAGCGCGGCGAGTCCTCGCTCCGC CTGCCGCCGTTCCGCGCGACGCCGCGCAAGAACCCCGACGACGACGCGGCCGCGGCCGCC GGCGCGAAGCTCGCCAAGGACAGCTTCTCCGTGTCCAAGATCTGGATGGTGCCGTCCAAG AAAGAGCCCGGCGCCGCCGCCGAGAGGCGCGCGGTGTCGTTCCGGTGGCCGGCGGCGAAG GACTGGGACGTCGAGGCCGGGAGCTGCGGCGGGAACAGCGCCGTGTCGTCGGTGGCGGCG GAGGAGCGGCCGTCGTTCGCGAGGAGGACGCTGCTCTGGGTCGTCGGAGGCAGCAGGCAG CTCAGCAGAGTCGGGAGCTGTTCATGA

Peptide Sequence

PEP ID	Os02t0790600-02
PEP Infomation	pep chromosome:IRGSP-1.0:2:33579602:33581210:-1 gene:Os02g0790600 transcript:Os02t0790600-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RING-H2 finger protein ATL1R (RING-H2 finger protein ATL8). (Os02t0790600-01);Similar to RING-H2 finger protein ATL1R (RING-H2 finger protein ATL8). (Os02t0790600-02)
Sequence	MSNSTWQPSPPQTPAAAASSASGIDGVENKISPSIVFIVAVLAIVFFVCGLLHLLVRHLL RLHRQRRAREDAESATAFEGQLQQLFHLHDAGVDQAFIDALPVFLYRNVVGVGGEDGKDP FDCAVCLCEFAADDQLRLLPKCSHAFHLECIDTWLLSHSTCPLCRRSLLAELSPTCTPVV MVLESESSRDMVHAADDEPADVGGEDAPGAEEVVEVKLGKFMCVEGNVFFNVNAIAGEGD RAGTSSNGNGDANAKAGGLGQRRCHSMGSYEYVMDAHASLRVSIKPPRKKPAAAASKSRR RGAMSECEFGASKRGESSLRLPPFRATPRKNPDDDAAAAAGAKLAKDSFSVSKIWMVPSK KEPGAAAERRAVSFRWPAAKDWDVEAGSCGGNSAVSSVAAEERPSFARRTLLWVVGGSRQ LSRVGSCS

Transcript Sequence

Transcript ID	Os02t0790600-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:33579602:33581210:-1 gene:Os02g0790600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RING-H2 finger protein ATL1R (RING-H2 finger protein ATL8). (Os02t0790600-01);Similar to RING-H2 finger protein ATL1R (RING-H2 finger protein ATL8). (Os02t0790600-02)
Sequence	GTCCTCTGTCCTTCTTCATCGCCAATGGCTGCCATGCCAACACCAAGATCCTTCTCCTAC CCCTAGCTCATCGCAAAACAAGCTAGAAATCGTCTCTTCTCCCAAGAAAATTCATCTTTG GATCGTAGAGCGTATTTGAAGAATGAGCAATTCGACGTGGCAGCCGTCGCCGCCGCAGAC TCCGGCGGCGGCGGCGTCGTCGGCGTCGGGGATTGACGGCGTGGAGAACAAGATAAGCCC GAGCATCGTGTTCATCGTGGCCGTCTTGGCGATCGTGTTCTTCGTGTGCGGGCTGCTGCA CCTGCTGGTGCGGCACCTGCTGCGGCTGCACCGGCAGCGGAGGGCGAGGGAGGACGCCGA GAGCGCGACGGCGTTCGAGGGGCAGCTGCAGCAGCTGTTCCACCTCCACGACGCCGGCGT CGACCAGGCCTTCATCGACGCGCTCCCGGTGTTCCTGTACCGGAACGTCGTCGGCGTCGG CGGCGAGGATGGCAAGGACCCGTTCGACTGCGCTGTCTGCCTGTGCGAGTTCGCCGCCGA CGACCAGCTCCGGCTGCTGCCCAAGTGCAGCCACGCGTTCCACCTCGAGTGCATCGACAC CTGGCTCCTCTCCCACTCCACCTGCCCGCTCTGCCGGAGGAGCCTCCTCGCCGAGCTCTC GCCGACGTGCACCCCCGTCGTCATGGTGCTCGAGTCCGAGAGCTCCCGCGACATGGTCCA CGCCGCCGACGATGAGCCAGCCGACGTCGGTGGCGAAGACGCGCCGGGAGCGGAGGAGGT GGTCGAGGTGAAGCTTGGGAAGTTCATGTGCGTCGAAGGCAACGTCTTCTTCAACGTCAA CGCCATCGCCGGCGAAGGGGATAGAGCCGGCACGAGCAGCAACGGCAATGGCGACGCCAA TGCCAAGGCTGGTGGTCTCGGGCAAAGACGGTGCCATTCCATGGGATCCTACGAGTACGT CATGGACGCGCACGCCTCCCTCCGCGTGTCCATCAAGCCGCCGAGGAAGAAGCCGGCGGC GGCGGCCTCCAAGTCGCGCCGCCGCGGCGCCATGTCGGAGTGCGAGTTCGGCGCCTCCAA GCGCGGCGAGTCCTCGCTCCGCCTGCCGCCGTTCCGCGCGACGCCGCGCAAGAACCCCGA CGACGACGCGGCCGCGGCCGCCGGCGCGAAGCTCGCCAAGGACAGCTTCTCCGTGTCCAA GATCTGGATGGTGCCGTCCAAGAAAGAGCCCGGCGCCGCCGCCGAGAGGCGCGCGGTGTC GTTCCGGTGGCCGGCGGCGAAGGACTGGGACGTCGAGGCCGGGAGCTGCGGCGGGAACAG CGCCGTGTCGTCGGTGGCGGCGGAGGAGCGGCCGTCGTTCGCGAGGAGGACGCTGCTCTG GGTCGTCGGAGGCAGCAGGCAGCTCAGCAGAGTCGGGAGCTGTTCATGATCACCATTTCG ATCATCAAATCTCAAAATGAAACCAAAAAAAAAAAAGATGATTCTTTTGTTCAGTTCTTT TACCCCCTCCTTTTGCTTGCTAGGTTATTGGTAGCGAACTAGCGATTGCATCCAACAGCA AGAGAAATTGTAAAACCCATATGCTACGAAGAGAAGAAATTTTCCTTTC