Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0789100-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:33530587:33535938:-1 gene:Os02g0789100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYCLIC NUCLEOTIDE GATED CHANNEL 5 description:Similar to predicted protein. (Os02t0789100-01)
Sequence	ATGTTTGGGGCGGGGAAGGTGGACGATGAGATGGCGCTCAAGAGGCAGAGAACCGTGAGG TTCTATGATGAGAAGGCAAAACCAACTATACCAACTCACCAGAAACAGGCAGGGTTCGCT GCTAGTAAACTTGGTGTGGCAAGCTCAGGAAAGAACAAAATTTTTGTGCCAGGAGAAGAG CTGTGGTACAAAAGGATTTTGGACCCATCAAGTGACTTCATCTTGACATGGAACCACATT TTCCTTTTTTCGTGCTTCGTTGCTCTATTTATAGACCCTCTGTACTTCTACGTGCCAAAA ATCTCCTATGGCACCCCAAATTCGTGTATTGGGACAGACAGGCATTTAGCCATCACTGTT ACATTCTTCCGATCAATCTCTGATTTACTATATTTCACTCACATTATAATAAAGTTTAGA ACGGCATATATTAATCCGAGCTCAACCATGAGGGTATTTGGAAGAGGAGACCTTATCACG GATCCAAAGGAAATTGCGTGGCAATATTTGAGATCTGACTTCGTAGTCGATGCAGTGGCT GCATTGCCTTTACCACAGATCTTAATCTGGTTTGTGATACCAGCTATTAAGTATTCCACT GATGAGCATAACAACAATATTCTGGTGCTGATAGTTCTTGCTCAGTATTTTCCAAGACTA TACCTCATATTCCCCTTGACTTATGAAATTGTCAAAACTACTGGAGTTGTCGCAAAGACT GCTTGGCAAGGGGCTGCATACAATATGTTGCTTTACATGATAGCCAGTCATGTACTAGGT GCTCTATGGTATTTGCTATCTGTCGATCGCCAAACTGCCTGCTGGAAGAGCAATTGCAAG AATGAAACTGGCTGTGATATTAAATTTCTAGATTGTGATGTGATACCAAATCAAAACTGG GCAAGCAAAACTGCTATCTTCAATACCTGTGACGCAACTAACACTTCAATCAGTTTTGAT TATGGCATGTTTCAGCCTGCATTGTTTAATCAAGCCCCAGGGCAACGTTTCTTGATGAAG TATTTCTATTCCCTTTGGTGGGGTTTGCAGAATCTGAGTTGCTATGGCCAGACTATTACT GTGAGTACCTATATTGGTGAGACTCTATACTGTATATTCTTGGCAGTACTTGGTCTCGTC TTGTTTGCACATTTGATTGGAAATGTACAGACCTACTTGCAATCTATCACTGTGAGGGTT GAGGAATGGAGATTAAAACAAAGAGATACAGAGGAGTGGATGAGGCATCGTCAACTCCCA CATGAACTACGAGAAAGGGTGAGACGGTTTATCCAGTACAAGTGGCTCGCAACTCGAGGA GTGAATGAAGAATCAATATTACAGGCTCTTCCTGCAGATCTTCGTCGTGACATTAAACGT CACCTTTGCTTGGGTCTTGTTCGCCGGGTTCCTTTCTTCTCCCAGATGGACAATCAACTT TTGGACGCCATCTGTGAGCGTCTTGTATCATCGTTGTGCACACAGGGCACATACATTGTC CGTGAGGGTGATCCAGTGACCGAGATGCTCTTCATCATTCGTGGGAAACTCGAAAGCTCT ACAACAAATGGTGGCCGCACTGGCTTCTTCAATTCAACTACCCTGAAATCCGGTGATTTC TGCGGCGAGGAACTGCTTGGGTGGGCTCTTGTCCCCAAACCTACTGTTAATTTGCCGTCA TCCACTCGGACAGTGAAGGCACTCATAGAAGTTGAGGCATTCGCACTCCAAGCTGAGGAT CTCAAGTTTGTTGCAAACCAATTCAGGCGTCTGCACAGCAAAAGATTGCAACACACTTTC CGGTACTACTCGCACCACTGGAGAACTTGGGCCTCATGCTTCATCCAAGCTGCTTGGCGG CGATACAAGAGGAGGAAGATGGCAAGGGACCTGAGCATGAGGGAGTCATTCTGCTCCATG AGATCAGATGACTCAAATGGTGAAGATGACTCGCCACCTAAGCAGAATCTCGCTATGAAG ATCATGAGTGGGAGTAGGAAAGGACCTCAGAACATGAAAGAGTTGCCTAAGCTAAGAAAG CCGGATGAGCCAGATTTTTCAGCTGAACCCTGTGAGTAA

Peptide Sequence

PEP ID	Os02t0789100-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:33530587:33535938:-1 gene:Os02g0789100 transcript:Os02t0789100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYCLIC NUCLEOTIDE GATED CHANNEL 5 description:Similar to predicted protein. (Os02t0789100-01)
Sequence	MFGAGKVDDEMALKRQRTVRFYDEKAKPTIPTHQKQAGFAASKLGVASSGKNKIFVPGEE LWYKRILDPSSDFILTWNHIFLFSCFVALFIDPLYFYVPKISYGTPNSCIGTDRHLAITV TFFRSISDLLYFTHIIIKFRTAYINPSSTMRVFGRGDLITDPKEIAWQYLRSDFVVDAVA ALPLPQILIWFVIPAIKYSTDEHNNNILVLIVLAQYFPRLYLIFPLTYEIVKTTGVVAKT AWQGAAYNMLLYMIASHVLGALWYLLSVDRQTACWKSNCKNETGCDIKFLDCDVIPNQNW ASKTAIFNTCDATNTSISFDYGMFQPALFNQAPGQRFLMKYFYSLWWGLQNLSCYGQTIT VSTYIGETLYCIFLAVLGLVLFAHLIGNVQTYLQSITVRVEEWRLKQRDTEEWMRHRQLP HELRERVRRFIQYKWLATRGVNEESILQALPADLRRDIKRHLCLGLVRRVPFFSQMDNQL LDAICERLVSSLCTQGTYIVREGDPVTEMLFIIRGKLESSTTNGGRTGFFNSTTLKSGDF CGEELLGWALVPKPTVNLPSSTRTVKALIEVEAFALQAEDLKFVANQFRRLHSKRLQHTF RYYSHHWRTWASCFIQAAWRRYKRRKMARDLSMRESFCSMRSDDSNGEDDSPPKQNLAMK IMSGSRKGPQNMKELPKLRKPDEPDFSAEPCE

Transcript Sequence

Transcript ID	Os02t0789100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:33530587:33535938:-1 gene:Os02g0789100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYCLIC NUCLEOTIDE GATED CHANNEL 5 description:Similar to predicted protein. (Os02t0789100-01)
Sequence	AGCGGCGACTAATAAAGTAATTAAGCCCAAGGTGGGGAGCATCCACGGGGAGGAGTTTCT GCTTCCTCCAGGCTCTACGATCCCCACCGCTGCGCTGACCACCCTCCTCGTGCCGATGCT GCGCAGAAGATCGGTCTTTGGCCGCCTCCCCGCCAGATTCGGCCGGTGAAGCTGCCAAGG CTGCTGCGCGGTGTGGTTGACGAGTTCTTGCTCGCTGACTCGCTGTAGCTGATGCCATGT TTGGGGCGGGGAAGGTGGACGATGAGATGGCGCTCAAGAGGCAGAGAACCGTGAGGTTCT ATGATGAGAAGGCAAAACCAACTATACCAACTCACCAGAAACAGGCAGGGTTCGCTGCTA GTAAACTTGGTGTGGCAAGCTCAGGAAAGAACAAAATTTTTGTGCCAGGAGAAGAGCTGT GGTACAAAAGGATTTTGGACCCATCAAGTGACTTCATCTTGACATGGAACCACATTTTCC TTTTTTCGTGCTTCGTTGCTCTATTTATAGACCCTCTGTACTTCTACGTGCCAAAAATCT CCTATGGCACCCCAAATTCGTGTATTGGGACAGACAGGCATTTAGCCATCACTGTTACAT TCTTCCGATCAATCTCTGATTTACTATATTTCACTCACATTATAATAAAGTTTAGAACGG CATATATTAATCCGAGCTCAACCATGAGGGTATTTGGAAGAGGAGACCTTATCACGGATC CAAAGGAAATTGCGTGGCAATATTTGAGATCTGACTTCGTAGTCGATGCAGTGGCTGCAT TGCCTTTACCACAGATCTTAATCTGGTTTGTGATACCAGCTATTAAGTATTCCACTGATG AGCATAACAACAATATTCTGGTGCTGATAGTTCTTGCTCAGTATTTTCCAAGACTATACC TCATATTCCCCTTGACTTATGAAATTGTCAAAACTACTGGAGTTGTCGCAAAGACTGCTT GGCAAGGGGCTGCATACAATATGTTGCTTTACATGATAGCCAGTCATGTACTAGGTGCTC TATGGTATTTGCTATCTGTCGATCGCCAAACTGCCTGCTGGAAGAGCAATTGCAAGAATG AAACTGGCTGTGATATTAAATTTCTAGATTGTGATGTGATACCAAATCAAAACTGGGCAA GCAAAACTGCTATCTTCAATACCTGTGACGCAACTAACACTTCAATCAGTTTTGATTATG GCATGTTTCAGCCTGCATTGTTTAATCAAGCCCCAGGGCAACGTTTCTTGATGAAGTATT TCTATTCCCTTTGGTGGGGTTTGCAGAATCTGAGTTGCTATGGCCAGACTATTACTGTGA GTACCTATATTGGTGAGACTCTATACTGTATATTCTTGGCAGTACTTGGTCTCGTCTTGT TTGCACATTTGATTGGAAATGTACAGACCTACTTGCAATCTATCACTGTGAGGGTTGAGG AATGGAGATTAAAACAAAGAGATACAGAGGAGTGGATGAGGCATCGTCAACTCCCACATG AACTACGAGAAAGGGTGAGACGGTTTATCCAGTACAAGTGGCTCGCAACTCGAGGAGTGA ATGAAGAATCAATATTACAGGCTCTTCCTGCAGATCTTCGTCGTGACATTAAACGTCACC TTTGCTTGGGTCTTGTTCGCCGGGTTCCTTTCTTCTCCCAGATGGACAATCAACTTTTGG ACGCCATCTGTGAGCGTCTTGTATCATCGTTGTGCACACAGGGCACATACATTGTCCGTG AGGGTGATCCAGTGACCGAGATGCTCTTCATCATTCGTGGGAAACTCGAAAGCTCTACAA CAAATGGTGGCCGCACTGGCTTCTTCAATTCAACTACCCTGAAATCCGGTGATTTCTGCG GCGAGGAACTGCTTGGGTGGGCTCTTGTCCCCAAACCTACTGTTAATTTGCCGTCATCCA CTCGGACAGTGAAGGCACTCATAGAAGTTGAGGCATTCGCACTCCAAGCTGAGGATCTCA AGTTTGTTGCAAACCAATTCAGGCGTCTGCACAGCAAAAGATTGCAACACACTTTCCGGT ACTACTCGCACCACTGGAGAACTTGGGCCTCATGCTTCATCCAAGCTGCTTGGCGGCGAT ACAAGAGGAGGAAGATGGCAAGGGACCTGAGCATGAGGGAGTCATTCTGCTCCATGAGAT CAGATGACTCAAATGGTGAAGATGACTCGCCACCTAAGCAGAATCTCGCTATGAAGATCA TGAGTGGGAGTAGGAAAGGACCTCAGAACATGAAAGAGTTGCCTAAGCTAAGAAAGCCGG ATGAGCCAGATTTTTCAGCTGAACCCTGTGAGTAAGGTCTAAAATGCAACAGCCATTGCT TCTGCTAACTCTGCTGCTACCAGTTAACCATTGCTATACTACCATATACTGTTGGATCGA CGGCACGAGTTGTCCAATTGTTGATGAGAAAGTTCATTAACTTGGAAACTAAAAAACATG GAGAAGCAGCGAATTCACGAAGGGATCGAGGCTTTGAGTTGACTAGATGTTTTAGGCGTT GGCAACTTGTACATCCAGATATACACGTCTGTGCTTGTAACATTCTTGAGATCTTAGAAA CGGCCGCACCCTTACATTTGACTGCAGAGAAAGAGCGTAAAAGAACTGAAGAAAGATCAA ACGTAAAGGCAGTCTGTATTTTTGGGAGTCTGTAAAGCGTTAGGGCGGCTATTTTTTGCT TTTAACTGATAGACATTTCGTTGTATTGTGCAATGTATTTTTGTGGCCAAAACTGCAGGT TAACATCTATACTGTGCATACGTTGTGCCTCCTTTGTGGCTCTCTCTCTTG