Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0788300-00
CDS Infomation

cds chromosome:IRGSP-1.0:2:33491615:33492869:1 gene:Os02g0788300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Eukaryotic translation initiation factor 3 subunit G. (Os02t0788300-00)
Sequence

ATGGCGGCGACGACGGCTAAGCACCAGACGATGCGGTGGAGCGACCTCGACGAGGACGAC
GACTACGGCGGCGGCGGCGGCGGCGGCCTCAGCGCCCTGCAGCTCCCGCCCCGCGTGGTC
ATCGGGCCGGACGAGAACGGGATCAAGAAAACCGTCGAGTACCGGCTCAACGAGGAGGGG
AAAGCGGTGCGGGTGACCACCACCACCCGCGTCCGCGAGGTCGCGCGCACGCGCGTCACC
AAGCGCGCCGCCGAGCGCCGCGGCTGGGCCAAGTTCGGCGACGCCGCGCACAACGACGAC
GCCGGCGCGCGCCTCACCGTGGTCTCCCCCGAGGAGATCGTTCTCGAGCGTCCAAGCGCA
CCAGGTATAGCAGTAGTCTCTTCTTCACTAGTACTACATCCACTCATCCCCGCACTGGAC
AAGGGCGCCGCGCTGATGGTTTGCAGGATCTGCAACGCCAAGGGCAAGCACTGGACATCC
AAGTGCCCCAACAAGGACTTCGCCCCTCTGCAGCTCGACGCTCTCGTCGACAACAATATT
CCTCCCAACTCTGGCGGCGACAATGGCGGCGGATCCCGGCCGGGCAAGTACGTGCCCCCG
AAGCCGAGGGAGTCGGAAATGCGGCGGAGGAACGACGAGAACTCGGTCCGCGTCACCAAC
CTGTCGGAGGACACCCGCGAGGAAGACCTCCGCGAGCTGTTCGGCAGCTTCGGCCCGCTC
ACCCGCGCGTACGTCGCGTTGGATCACCGGACCGGGGAGAGCAGGGGGTTCGGCTTCCTC
AGCTTCGTCTACAGGGAGGACGCCGAGAGGGCCATCGCTAAGCTCAATGGCTATGGCTAC
GATAGCCTCATCCTTAATGTCGAGTGGGCTGCTCCAAGGCCCAACTAG

Peptide Sequence

PEP ID

Os02t0788300-00
PEP Infomation

pep chromosome:IRGSP-1.0:2:33491615:33492869:1 gene:Os02g0788300 transcript:Os02t0788300-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Eukaryotic translation initiation factor 3 subunit G. (Os02t0788300-00)
Sequence

MAATTAKHQTMRWSDLDEDDDYGGGGGGGLSALQLPPRVVIGPDENGIKKTVEYRLNEEG
KAVRVTTTTRVREVARTRVTKRAAERRGWAKFGDAAHNDDAGARLTVVSPEEIVLERPSA
PGIAVVSSSLVLHPLIPALDKGAALMVCRICNAKGKHWTSKCPNKDFAPLQLDALVDNNI
PPNSGGDNGGGSRPGKYVPPKPRESEMRRRNDENSVRVTNLSEDTREEDLRELFGSFGPL
TRAYVALDHRTGESRGFGFLSFVYREDAERAIAKLNGYGYDSLILNVEWAAPRPN

Transcript Sequence

Transcript ID

Os02t0788300-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:33491615:33492869:1 gene:Os02g0788300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Eukaryotic translation initiation factor 3 subunit G. (Os02t0788300-00)
Sequence

ATGGCGGCGACGACGGCTAAGCACCAGACGATGCGGTGGAGCGACCTCGACGAGGACGAC
GACTACGGCGGCGGCGGCGGCGGCGGCCTCAGCGCCCTGCAGCTCCCGCCCCGCGTGGTC
ATCGGGCCGGACGAGAACGGGATCAAGAAAACCGTCGAGTACCGGCTCAACGAGGAGGGG
AAAGCGGTGCGGGTGACCACCACCACCCGCGTCCGCGAGGTCGCGCGCACGCGCGTCACC
AAGCGCGCCGCCGAGCGCCGCGGCTGGGCCAAGTTCGGCGACGCCGCGCACAACGACGAC
GCCGGCGCGCGCCTCACCGTGGTCTCCCCCGAGGAGATCGTTCTCGAGCGTCCAAGCGCA
CCAGGTATAGCAGTAGTCTCTTCTTCACTAGTACTACATCCACTCATCCCCGCACTGGAC
AAGGGCGCCGCGCTGATGGTTTGCAGGATCTGCAACGCCAAGGGCAAGCACTGGACATCC
AAGTGCCCCAACAAGGACTTCGCCCCTCTGCAGCTCGACGCTCTCGTCGACAACAATATT
CCTCCCAACTCTGGCGGCGACAATGGCGGCGGATCCCGGCCGGGCAAGTACGTGCCCCCG
AAGCCGAGGGAGTCGGAAATGCGGCGGAGGAACGACGAGAACTCGGTCCGCGTCACCAAC
CTGTCGGAGGACACCCGCGAGGAAGACCTCCGCGAGCTGTTCGGCAGCTTCGGCCCGCTC
ACCCGCGCGTACGTCGCGTTGGATCACCGGACCGGGGAGAGCAGGGGGTTCGGCTTCCTC
AGCTTCGTCTACAGGGAGGACGCCGAGAGGGCCATCGCTAAGCTCAATGGCTATGGCTAC
GATAGCCTCATCCTTAATGTCGAGTGGGCTGCTCCAAGGCCCAACTAG