Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0787000-00
CDS Infomation

cds chromosome:IRGSP-1.0:2:33427245:33427781:-1 gene:Os02g0787000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Allergen V5/Tpx-1 related family protein. (Os02t0787000-00)
Sequence

ATGGAGTACAGCTCAAGGAGGGTCTCCTGCTGCGTCGCGCTGGCCGCCGTGCTGCTCCTG
TCGTCGCGCACGCTCGGCGGCGCCGCCGGCGGCGCGCCGCGGCGGCTGCTGCAGATCAGC
GAGGCGCAGCAGTTCGTGGTGCCGCAGACGCACCTCCGCGCGATCTACGGCCTGCACCCG
CTCAAGTGGAGCAGCGACCTGGCGGACCTGGCGACGCGGTGGGCGGACCAGTACAAGGGC
GACTGCGCGGCGGCGTCGGCGGCGTCGGCGGCGGGCGGCGTGAACGTGTTCCGCGGCTAC
GGCGGCGAGGCGTGGCAGCCGAGCGACGCGGTGGCGGCGTGGGCGGAGGAGGCGCAGCAC
TACGACTACGGCGCCAACGCGTGCGCGGCGGGCAAGGAGTGCGGCCACTACAAGCAGATG
ATGTGGCGCGACAGCACGCAGGTCGGCTGCGCCACCGTCACCTGCTCCTCCGGCGAGACG
CTCATGGCGTGCCACTACGAGCCGCAGGGCAACATCATGGGGCAGAAGCCCTTCTGA

Peptide Sequence

PEP ID

Os02t0787000-00
PEP Infomation

pep chromosome:IRGSP-1.0:2:33427245:33427781:-1 gene:Os02g0787000 transcript:Os02t0787000-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Allergen V5/Tpx-1 related family protein. (Os02t0787000-00)
Sequence

MEYSSRRVSCCVALAAVLLLSSRTLGGAAGGAPRRLLQISEAQQFVVPQTHLRAIYGLHP
LKWSSDLADLATRWADQYKGDCAAASAASAAGGVNVFRGYGGEAWQPSDAVAAWAEEAQH
YDYGANACAAGKECGHYKQMMWRDSTQVGCATVTCSSGETLMACHYEPQGNIMGQKPF

Transcript Sequence

Transcript ID

Os02t0787000-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:33427245:33427781:-1 gene:Os02g0787000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Allergen V5/Tpx-1 related family protein. (Os02t0787000-00)
Sequence

ATGGAGTACAGCTCAAGGAGGGTCTCCTGCTGCGTCGCGCTGGCCGCCGTGCTGCTCCTG
TCGTCGCGCACGCTCGGCGGCGCCGCCGGCGGCGCGCCGCGGCGGCTGCTGCAGATCAGC
GAGGCGCAGCAGTTCGTGGTGCCGCAGACGCACCTCCGCGCGATCTACGGCCTGCACCCG
CTCAAGTGGAGCAGCGACCTGGCGGACCTGGCGACGCGGTGGGCGGACCAGTACAAGGGC
GACTGCGCGGCGGCGTCGGCGGCGTCGGCGGCGGGCGGCGTGAACGTGTTCCGCGGCTAC
GGCGGCGAGGCGTGGCAGCCGAGCGACGCGGTGGCGGCGTGGGCGGAGGAGGCGCAGCAC
TACGACTACGGCGCCAACGCGTGCGCGGCGGGCAAGGAGTGCGGCCACTACAAGCAGATG
ATGTGGCGCGACAGCACGCAGGTCGGCTGCGCCACCGTCACCTGCTCCTCCGGCGAGACG
CTCATGGCGTGCCACTACGAGCCGCAGGGCAACATCATGGGGCAGAAGCCCTTCTGA