Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0783000-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:33221378:33223595:-1 gene:Os02g0783000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PECTIN METHYLESTERASE 9 description:Similar to Pectin methylesterase 5 (Fragment). (Os02t0783000-01)
Sequence

ATGCATCTACACACGCATCAAGCTAAGGACATGGAAACGCTTGGGAGGAGGAGGAGAGTG
GCCGTCCTTGCATGGTGCAATGCCATTGCAATGGCGCTAGCTCTAGCGACACCGGTGGCG
GCTGTCGCTGCCAACCACGGCGACACGGCGGCGGCGAAGGACAATGTGGCCGTCGTCCCG
AGGATTGCCGCCTCGGCGGCGGCGGCGGCGTCGAGCGTGAACGTCACGGCCATCTGCATG
GCGACGCCGTACCCGAGCGCGTGCGAGACGGCGCTCTCGTCGGCGGCGGCGCGGGGCGCG
GCCAACGACCCGTTCGCGGCGTCGGTGCAGTTCGCGATGACCCGCGCCGAGTCGGCGCGC
GCGCTGGCGCGCAACCTGTCGGCGTCGTCGTCGAGGCCACGCGTGGCGCCGAGCGGCATG
GACGACTGCGCCGAGCTGCTCGACATCAGCCTCGACCAGCTCCACGACGCGCTCGCCGCG
CGCGCCGCGGACGCGGCCGGCGTGACGACGTGGCTCAGCGCCGCGCTGACGAACCAGGGC
ACGTGCGGCGACAGCCTCGCCGCCGTTCCCGACCCCGCGGCGCGCTCCGCCGTACGCGCC
CGGGTCGCCGCGCTCGAGCAGTTCATCGGCACGGCGCTGGCTCTCCACGCCAAGCTCAAC
AATGGCGGCAGCGGGAGCTCCTCGCCGGCGCCGCCGAGCCGCGCCGCGTTCCCATCCTGG
GTCACCAAGCACGACAGGCACCTCCTCTCATCCCCGGCGAGCACCATCGCGCCGGACGCC
GTGGTGGCCCTCGACGGCAGCGGGACGCACACGAGCATCAGCGACGCGATCGCCGCCGTG
ACCGCGCCGCCGCCGCCGGCGCACCACCCCACGGCGAGCGGCGGCGGCGGCGGCGGACGG
AGCCGAAAGGTGATCTACGTGAAGGCTGGGAGGTACGAGGAGAGCGTGAGCATCACGAGC
AAGCAGAAGGACGTGATGCTGCTCGGCGACGGCAAGGGGAAGACGGTCATCTCCGGCCAC
CGGAGCGTCGCCGGCGGCTACACCACCTACGCCTCCGCCACCGTCGCTGCAATGGGGTCG
GGGTTTATAGCCAAGGGCCTGACGATCGTGAACAGTGCCGGGCCGGGGAAGGGCCAGGCG
GTGGCGCTGCGCGTCGGCGGCGACCTCTCTGTCGTGTACAATTGCGGCATTGAGGCGTAC
CAGGACACGCTCTACGTGCACTCCAACCGGCAGTTCTACGCCGCCGACGACATCTCCGGC
ACGGTGGACTTCATCTTCGGCAACGCCGCGGCGGTCATCCAGGGCTGCGAGATCCGGGCC
CGGCGGCCCAGCCCGGGCCAGGAGGACACCGTCACGGCCCAGGGCCGGTCCGACCCGAAC
CAGAACACCGGCATCTCTATCCATCGGTGCCGGATCACCGGCGCGCCGGACCTCGGCGGC
ACGCCGGTGTATCTGGGCCGTCCGTGGCGGAGGTACTCACGGACGGTCGTGATGGGGACG
TTCCTGGACCGTTCGATCGCACCGGCCGGGTGGCTCGAGTGGTCGGGCCAGTTCGGGCTC
AGCACGCTCTACTATGGCGAGTACGGCAACACCGGGCCTGGCGCGGGGACACGTCGGCGG
GTGACGTGGAGCGGCGTGCACACGTCGATGTCCACGTCGGACGCCACGAGGTTCACCGTG
GCAAACTTTATCGTTGGGGATGCGTGGCTACCTGCCACTGGAGTTACCTACACTTCAGGT
CTGTAG

Peptide Sequence

PEP ID

Os02t0783000-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:33221378:33223595:-1 gene:Os02g0783000 transcript:Os02t0783000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PECTIN METHYLESTERASE 9 description:Similar to Pectin methylesterase 5 (Fragment). (Os02t0783000-01)
Sequence

MHLHTHQAKDMETLGRRRRVAVLAWCNAIAMALALATPVAAVAANHGDTAAAKDNVAVVP
RIAASAAAAASSVNVTAICMATPYPSACETALSSAAARGAANDPFAASVQFAMTRAESAR
ALARNLSASSSRPRVAPSGMDDCAELLDISLDQLHDALAARAADAAGVTTWLSAALTNQG
TCGDSLAAVPDPAARSAVRARVAALEQFIGTALALHAKLNNGGSGSSSPAPPSRAAFPSW
VTKHDRHLLSSPASTIAPDAVVALDGSGTHTSISDAIAAVTAPPPPAHHPTASGGGGGGR
SRKVIYVKAGRYEESVSITSKQKDVMLLGDGKGKTVISGHRSVAGGYTTYASATVAAMGS
GFIAKGLTIVNSAGPGKGQAVALRVGGDLSVVYNCGIEAYQDTLYVHSNRQFYAADDISG
TVDFIFGNAAAVIQGCEIRARRPSPGQEDTVTAQGRSDPNQNTGISIHRCRITGAPDLGG
TPVYLGRPWRRYSRTVVMGTFLDRSIAPAGWLEWSGQFGLSTLYYGEYGNTGPGAGTRRR
VTWSGVHTSMSTSDATRFTVANFIVGDAWLPATGVTYTSGL

Transcript Sequence

Transcript ID

Os02t0783000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:33221378:33223595:-1 gene:Os02g0783000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PECTIN METHYLESTERASE 9 description:Similar to Pectin methylesterase 5 (Fragment). (Os02t0783000-01)
Sequence

GTACATTGCACCCATGCATCTACACACGCATCAAGCTAAGGACATGGAAACGCTTGGGAG
GAGGAGGAGAGTGGCCGTCCTTGCATGGTGCAATGCCATTGCAATGGCGCTAGCTCTAGC
GACACCGGTGGCGGCTGTCGCTGCCAACCACGGCGACACGGCGGCGGCGAAGGACAATGT
GGCCGTCGTCCCGAGGATTGCCGCCTCGGCGGCGGCGGCGGCGTCGAGCGTGAACGTCAC
GGCCATCTGCATGGCGACGCCGTACCCGAGCGCGTGCGAGACGGCGCTCTCGTCGGCGGC
GGCGCGGGGCGCGGCCAACGACCCGTTCGCGGCGTCGGTGCAGTTCGCGATGACCCGCGC
CGAGTCGGCGCGCGCGCTGGCGCGCAACCTGTCGGCGTCGTCGTCGAGGCCACGCGTGGC
GCCGAGCGGCATGGACGACTGCGCCGAGCTGCTCGACATCAGCCTCGACCAGCTCCACGA
CGCGCTCGCCGCGCGCGCCGCGGACGCGGCCGGCGTGACGACGTGGCTCAGCGCCGCGCT
GACGAACCAGGGCACGTGCGGCGACAGCCTCGCCGCCGTTCCCGACCCCGCGGCGCGCTC
CGCCGTACGCGCCCGGGTCGCCGCGCTCGAGCAGTTCATCGGCACGGCGCTGGCTCTCCA
CGCCAAGCTCAACAATGGCGGCAGCGGGAGCTCCTCGCCGGCGCCGCCGAGCCGCGCCGC
GTTCCCATCCTGGGTCACCAAGCACGACAGGCACCTCCTCTCATCCCCGGCGAGCACCAT
CGCGCCGGACGCCGTGGTGGCCCTCGACGGCAGCGGGACGCACACGAGCATCAGCGACGC
GATCGCCGCCGTGACCGCGCCGCCGCCGCCGGCGCACCACCCCACGGCGAGCGGCGGCGG
CGGCGGCGGACGGAGCCGAAAGGTGATCTACGTGAAGGCTGGGAGGTACGAGGAGAGCGT
GAGCATCACGAGCAAGCAGAAGGACGTGATGCTGCTCGGCGACGGCAAGGGGAAGACGGT
CATCTCCGGCCACCGGAGCGTCGCCGGCGGCTACACCACCTACGCCTCCGCCACCGTCGC
TGCAATGGGGTCGGGGTTTATAGCCAAGGGCCTGACGATCGTGAACAGTGCCGGGCCGGG
GAAGGGCCAGGCGGTGGCGCTGCGCGTCGGCGGCGACCTCTCTGTCGTGTACAATTGCGG
CATTGAGGCGTACCAGGACACGCTCTACGTGCACTCCAACCGGCAGTTCTACGCCGCCGA
CGACATCTCCGGCACGGTGGACTTCATCTTCGGCAACGCCGCGGCGGTCATCCAGGGCTG
CGAGATCCGGGCCCGGCGGCCCAGCCCGGGCCAGGAGGACACCGTCACGGCCCAGGGCCG
GTCCGACCCGAACCAGAACACCGGCATCTCTATCCATCGGTGCCGGATCACCGGCGCGCC
GGACCTCGGCGGCACGCCGGTGTATCTGGGCCGTCCGTGGCGGAGGTACTCACGGACGGT
CGTGATGGGGACGTTCCTGGACCGTTCGATCGCACCGGCCGGGTGGCTCGAGTGGTCGGG
CCAGTTCGGGCTCAGCACGCTCTACTATGGCGAGTACGGCAACACCGGGCCTGGCGCGGG
GACACGTCGGCGGGTGACGTGGAGCGGCGTGCACACGTCGATGTCCACGTCGGACGCCAC
GAGGTTCACCGTGGCAAACTTTATCGTTGGGGATGCGTGGCTACCTGCCACTGGAGTTAC
CTACACTTCAGGTCTGTAGTGGCGTACTAGTAGCG