Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0781300-00
CDS Infomation

cds chromosome:IRGSP-1.0:2:33107745:33108527:-1 gene:Os02g0781300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ETHYLENE RESPONSE FACTOR 11 description:Similar to AP2/ERF domain-containing transcription factor. (Os02t0781300-00)
Sequence

ATGATGTCATCGTCGTCGCCGGTGGTGGCGTCACCGCCGGAGATGGAGAAGAAGTACAAG
GGTGTGCGGCGGCGGAAGTGGGGGAAGTGGGTGTCGGAGATCCGGCTGCCCAATAGCCGC
GACCGCATCTGGCTGGGCTCCTACGACTCGCCGGAGAAGGCGGCGCGGGCGTTCGACGCC
GCCTTCGTCACGCTCCGCGGCCACGGCGCCGCCGGCGCCGACCTCAACTTCCCGGACTCG
CCGCCGTCGTGCGACGCCCGCAGCAGCGACCCGCGGCAGGTGCAGGCCGCCGCGCTCTCC
CACGCCAACCGCGCCCACGTCACGCCGCAGCAGGCGGCCGCGGCGCTCATGTCGCCGCCC
TCGCTGTCGCCGCCGCCGGGGTTCGCCACCGGCAGCGAGGTGGTGGCGCCCGCCGTGCGC
GCCGACGGCAGCATCGACTGGCGCCCGGTCATGGCGCACCCGCCGCCGCTGTACTCGCCG
CCCGGCTGGGGCGGCGGCCATGCCTACGACTTCTTGCAGCCGCCGCCGCCGTCGCCGCCG
TTGCCGTCGTGCGACGACGACATGGTCGACGTCGTAGATGAGAGCAGCGCTTCGCTTTGG
AGCTTTGACACGCGAGACTCCTACTTCCGATACTAA

Peptide Sequence

PEP ID

Os02t0781300-00
PEP Infomation

pep chromosome:IRGSP-1.0:2:33107745:33108527:-1 gene:Os02g0781300 transcript:Os02t0781300-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ETHYLENE RESPONSE FACTOR 11 description:Similar to AP2/ERF domain-containing transcription factor. (Os02t0781300-00)
Sequence

MMSSSSPVVASPPEMEKKYKGVRRRKWGKWVSEIRLPNSRDRIWLGSYDSPEKAARAFDA
AFVTLRGHGAAGADLNFPDSPPSCDARSSDPRQVQAAALSHANRAHVTPQQAAAALMSPP
SLSPPPGFATGSEVVAPAVRADGSIDWRPVMAHPPPLYSPPGWGGGHAYDFLQPPPPSPP
LPSCDDDMVDVVDESSASLWSFDTRDSYFRY

Transcript Sequence

Transcript ID

Os02t0781300-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:33107745:33108527:-1 gene:Os02g0781300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ETHYLENE RESPONSE FACTOR 11 description:Similar to AP2/ERF domain-containing transcription factor. (Os02t0781300-00)
Sequence

ACGCGCCATGGCGAGTCAACGCGTCGCACCCGACGACGCATGGCGACGGTATAAGTAGCC
GAGGCGACCCCGCCAGGATGATCCAGCAGCAAGCAAACCCAAAGCCACCATCAACACAGC
ACGTACACGTACGTGCAACGTCACTGCATGATGTCATCGTCGTCGCCGGTGGTGGCGTCA
CCGCCGGAGATGGAGAAGAAGTACAAGGGTGTGCGGCGGCGGAAGTGGGGGAAGTGGGTG
TCGGAGATCCGGCTGCCCAATAGCCGCGACCGCATCTGGCTGGGCTCCTACGACTCGCCG
GAGAAGGCGGCGCGGGCGTTCGACGCCGCCTTCGTCACGCTCCGCGGCCACGGCGCCGCC
GGCGCCGACCTCAACTTCCCGGACTCGCCGCCGTCGTGCGACGCCCGCAGCAGCGACCCG
CGGCAGGTGCAGGCCGCCGCGCTCTCCCACGCCAACCGCGCCCACGTCACGCCGCAGCAG
GCGGCCGCGGCGCTCATGTCGCCGCCCTCGCTGTCGCCGCCGCCGGGGTTCGCCACCGGC
AGCGAGGTGGTGGCGCCCGCCGTGCGCGCCGACGGCAGCATCGACTGGCGCCCGGTCATG
GCGCACCCGCCGCCGCTGTACTCGCCGCCCGGCTGGGGCGGCGGCCATGCCTACGACTTC
TTGCAGCCGCCGCCGCCGTCGCCGCCGTTGCCGTCGTGCGACGACGACATGGTCGACGTC
GTAGATGAGAGCAGCGCTTCGCTTTGGAGCTTTGACACGCGAGACTCCTACTTCCGATAC
TAA