Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0780550-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:33067716:33071743:1 gene:Os02g0780550 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to smr domain containing protein. (Os02t0780550-01)
Sequence

ATGAGTTCACATGGATTTTCTACAAAAGGCGGAGATGCAGGGTCAAAATTACCAAGTACA
GTTACCACCCTAAATCCAAATGCAGCAGAATTTGTCCCTTCAACTTTTAGGTCGCCTTTT
GGAAGTAGAACAGTTGCGGATGTAAGTAAACCAGATTTTAGGGGGCTCTCTGGTAAAACG
AACCTTGGTAGGTCGGAATCATCAAAATCTAATAACTCGGATGATGAAACACACCAGTTT
TGGCATAGACAGCTTCCTGATGATATTATTCCAGACTTCAGTGATATGGAAAAAGTTGAA
CAGCAACATGGAGAATTGTCATTTTCTGGATTGTCATTGAATGCACCCCCTTTCTTTGGC
ACAGCAGCCAGCAACTTGTCGAGAGAGCATCATGGGTTATTGTCTCAAGCAGGCAAGAAT
CTTGACCTGGGGCACAATGATTTGTATTATGATGAGAATTCAGGTTCAAACAGTGGGAAG
CAAAATCATGCAGATAACCTATGTTATACTAATGGGAAGCTTGACCTCCTTTATGATCAT
GACCCACTTGAGTATTTAGCATCCCAGTTTCCTGGTTTTTCTGTGGAGAGCCTTGCTGAG
TTGTACTGTGCTAATGGTTGCGACTTCGACCTTACTGTTGAAATTCTCACTCAGTTAGAG
ATGCAAGTTGATGCTAGCTCCTGTCAGAATCTGAATCTGGCCCCAAATACACCAAACATT
GGCACAGGAAACTTCCCTGTACTACCTGGAACAGAAGACCTTAATTGTTTGTTTGAAGGC
AATGTAGGTGCCCATGGAATTACAAACAGACACAACTCTTCAACAATGTCTAGGACTGGA
GATTTTGTTTCAGCTATTCAAAGACTTGCATTGCAGGATGCTGGCCACATGAAGTTTAAA
AATGAAAGTCCCAAGTATGCTAATGGTCTTTTGAGTATTGTTGCGCGGAAACAGTATGGC
TGTGATACAAGGTCTTCCTTAGGAAACAAGTTCCTTAAGGCCAGTAGTAATGTTCACTCA
GCCCCAGTCAGTCTAAAGACTGGTGATGCCATGGCAAGCATGTGCTCAGAATCAAGGGGG
GAAGCTGGTGATTTTGCCCGCATACGCAATACATGTTTTGAACAAGCCACGCAAGCTTAT
ATGATGGGAAACAAAGCGTTAGCAAAGGAACTGAGCATGAAGGGACAGTTGTACAACCTG
CAAATGAAGGCAGCTCATGAGACAGCTAGGGAAGCTATTTATCAGCAAAGGAACCCATTT
TCATCTGAACAAGGCCAGGACCGTCTGATCGACTTGCATGGGCTTCAGGTGAGCGAAGCC
ATCCAGGTTGTGAAGGCTGAGCTTGCCCTCCTGATGGGTGCTACAAGGTCAGCTGGAGAA
GGCACAGATCATGATCTGCATTGGAACAGGACACCACACCAAGGGCTCTCGCGAGGCAAG
GTTGCCGGACGCCCTTGA

Peptide Sequence

PEP ID

Os02t0780550-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:33067716:33071743:1 gene:Os02g0780550 transcript:Os02t0780550-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to smr domain containing protein. (Os02t0780550-01)
Sequence

MSSHGFSTKGGDAGSKLPSTVTTLNPNAAEFVPSTFRSPFGSRTVADVSKPDFRGLSGKT
NLGRSESSKSNNSDDETHQFWHRQLPDDIIPDFSDMEKVEQQHGELSFSGLSLNAPPFFG
TAASNLSREHHGLLSQAGKNLDLGHNDLYYDENSGSNSGKQNHADNLCYTNGKLDLLYDH
DPLEYLASQFPGFSVESLAELYCANGCDFDLTVEILTQLEMQVDASSCQNLNLAPNTPNI
GTGNFPVLPGTEDLNCLFEGNVGAHGITNRHNSSTMSRTGDFVSAIQRLALQDAGHMKFK
NESPKYANGLLSIVARKQYGCDTRSSLGNKFLKASSNVHSAPVSLKTGDAMASMCSESRG
EAGDFARIRNTCFEQATQAYMMGNKALAKELSMKGQLYNLQMKAAHETAREAIYQQRNPF
SSEQGQDRLIDLHGLQVSEAIQVVKAELALLMGATRSAGEGTDHDLHWNRTPHQGLSRGK
VAGRP

Transcript Sequence

Transcript ID

Os02t0780550-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:33067716:33071743:1 gene:Os02g0780550 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to smr domain containing protein. (Os02t0780550-01)
Sequence

ACTGCTCTCTTCCATTCCTTCCAAGGAATCCTCCCCACCATCTTCATCTCCACTCCCTCT
CCTCTCTACTCCTCTACGCGGTCGAGCAATCAACCCGCCGCCGCCGCCGGAGGGGCCGCT
CTCCGTCGAGGGCTCGCCATCTTATATATGGGCCGGCCGCCTCCGGCTGCGCTCCAGCTG
ATCGGCCGCCGGAAAGAATCTGCAAGAAGATGAGTTCACATGGATTTTCTACAAAAGGCG
GAGATGCAGGGTCAAAATTACCAAGTACAGTTACCACCCTAAATCCAAATGCAGCAGAAT
TTGTCCCTTCAACTTTTAGGTCGCCTTTTGGAAGTAGAACAGTTGCGGATGTAAGTAAAC
CAGATTTTAGGGGGCTCTCTGGTAAAACGAACCTTGGTAGGTCGGAATCATCAAAATCTA
ATAACTCGGATGATGAAACACACCAGTTTTGGCATAGACAGCTTCCTGATGATATTATTC
CAGACTTCAGTGATATGGAAAAAGTTGAACAGCAACATGGAGAATTGTCATTTTCTGGAT
TGTCATTGAATGCACCCCCTTTCTTTGGCACAGCAGCCAGCAACTTGTCGAGAGAGCATC
ATGGGTTATTGTCTCAAGCAGGCAAGAATCTTGACCTGGGGCACAATGATTTGTATTATG
ATGAGAATTCAGGTTCAAACAGTGGGAAGCAAAATCATGCAGATAACCTATGTTATACTA
ATGGGAAGCTTGACCTCCTTTATGATCATGACCCACTTGAGTATTTAGCATCCCAGTTTC
CTGGTTTTTCTGTGGAGAGCCTTGCTGAGTTGTACTGTGCTAATGGTTGCGACTTCGACC
TTACTGTTGAAATTCTCACTCAGTTAGAGATGCAAGTTGATGCTAGCTCCTGTCAGAATC
TGAATCTGGCCCCAAATACACCAAACATTGGCACAGGAAACTTCCCTGTACTACCTGGAA
CAGAAGACCTTAATTGTTTGTTTGAAGGCAATGTAGGTGCCCATGGAATTACAAACAGAC
ACAACTCTTCAACAATGTCTAGGACTGGAGATTTTGTTTCAGCTATTCAAAGACTTGCAT
TGCAGGATGCTGGCCACATGAAGTTTAAAAATGAAAGTCCCAAGTATGCTAATGGTCTTT
TGAGTATTGTTGCGCGGAAACAGTATGGCTGTGATACAAGGTCTTCCTTAGGAAACAAGT
TCCTTAAGGCCAGTAGTAATGTTCACTCAGCCCCAGTCAGTCTAAAGACTGGTGATGCCA
TGGCAAGCATGTGCTCAGAATCAAGGGGGGAAGCTGGTGATTTTGCCCGCATACGCAATA
CATGTTTTGAACAAGCCACGCAAGCTTATATGATGGGAAACAAAGCGTTAGCAAAGGAAC
TGAGCATGAAGGGACAGTTGTACAACCTGCAAATGAAGGCAGCTCATGAGACAGCTAGGG
AAGCTATTTATCAGCAAAGGAACCCATTTTCATCTGAACAAGGCCAGGACCGTCTGATCG
ACTTGCATGGGCTTCAGGTGAGCGAAGCCATCCAGGTTGTGAAGGCTGAGCTTGCCCTCC
TGATGGGTGCTACAAGGTCAGCTGGAGAAGGCACAGATCATGATCTGCATTGGAACAGGA
CACCACACCAAGGGCTCTCGCGAGGCAAGGTTGCCGGACGCCCTTGAACATTTCCTCCTG
GATGAAGGCCTCCATCACACGCAGCCATAGCCTGGTCTGCTCCATGTTAACCTGTGCTAA
CATCGTCTTCTAGGTAAACAATCTGGGAGAAGAAAAGGAGGTTAGGGGGAAAAAAGAAGG
TGAGCCCTAACCTGACAATGTAAAATATATCTATCTATACCTGTATGCACAATGCACGTA
TACTAATTAGCTACTCCAAGGGCCAGAGAAGAACGGCACGAAACATCATGTATGTTGTAT
TGTTTCTCGTTGTACATGTCGTATGTACATATCAGGTATAACTTGTTTTTAGTTAATTAA
CGTGGAGACTT