Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0780500-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:33054175:33066629:1 gene:Os02g0780500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SRL2-like gene, semi-rolled leaf 2-like gene description:Conserved hypothetical protein. (Os02t0780500-01)
Sequence	ATGACGATGGGTGTGGTGTCAAGGGAGGTATTGCCTGCATGCGAGAGGCTTTGCTTCCTT TGCCCGTCATTGCGCACGAGGTCTCGGCATCCGGTCAAGCGATACAAGAAGTTGCTCTCA GAAATCTTCCCTAAGTCACAGGATGAAGAACCCAATGACCGAAAGATCGGCAAATTGTGC GAATATATTTCGAGGAATCCTTTGCGTGTTCCAAAGATTACAGTTTATTTAGAGCAAAAA TTCTACAAGGAATTGAGAGTTGAGCATTTTGGGTCAGTGAAAGTTGTCATGGCAATTTAC CGAAAGGTGATATGTTCTTGTCAGGAGCAACTGCCTCTTTTCGCCAATAGCTTGCTAAAC ATCGTAGAAGCCCTATTGGAACAGAACAGACAGGATGACTTGCGGACAATAGCGTGTCGA ACACTTTTTTACTTTGTAAACAACCAGGTTGACAGCACATACATGTTCAATTTAGAGAGC CAAATCCCTAAACTATGTCAACTGGCCCAAGAGATGGGTGAGAAGGAGAAGATATCCATT GTTCATGCAGCTGGCCTCCAAGCCCTTTCATCCATGGTGTGGTTTATGGGTGAGCATTCC CATATCTCTGCAGAGCTCGACAACGTTGTCTCTGCAGTTCTGGAAAACTACGAGAGCCCA TATGCAAATTCTGATAATGATGCTGCCATTGAGGATAGAAGGACTCAGTGGGTGAGTGAA GTTCTCAAAGCTGAAGATCATGAACCTTCCGGTATTACCATTTTGACAAGGGTTCCTTCA TGGAAAGCCATTAGAGCTCCCCGCGGTGAATTAAGCCTGACAACTGAAGAATCAGAAAGT CCAAATTTTTGGTCAGGGATTTGTCTGCACAACCTTGCTAGAATATCCAGGGAAGCAACA ACAGTCCGACGAGTTCTGGAAGCTATATTTCGTTATTTTGATAACAACAATCTGTGGTCG CCTTCTAAAGGACTTGCATTGTGTGTCCTTTTGGATATGCAAATTGTGATAGAGAAATCT GGACAGAATTCACATATATTGTTATCCATGTTAGTCAAGCATCTTGAACACAAGAATGTA TTGAAGCAGACAGATAAGATTCTGGACATTATTGAGGTCACAACACGCCTTGCCGAGCAC TCCAAAGCTCAATCTTCTACTGCACTAATGGCTGCAATAAGTGATATGGTCAGGCATTTG AGTAAAAACATGCAGCTCTTGGTCAGTGATGTAGGTCCTGGGGATGGCATGGTTATGAAT GACAGATATGGGAAAGCTACCGATGAATGTCTTGTTCAGTTGTCTAGAAAGGTAGGCGAT GCTGGGCCTATCCTTGATGCGTTGGCTGTTGTCCTGGAGAACATTTCAAGTACTACACCT GTTGCCCGGTCCACTATTGCTGCAACATATCGTACAGCTCAAATAATTGCATCATTGCCA AATCTGTTATACCAGAGCAAAGCATTTCCTGAGGCGTTATTTCATCAATTGCTTTTGGCA ATGGTCTATCCAGATTGTGAGACACATTTAGGGGCACATCGGATTTTCTCTGTTGTTCTT GTTCCTTCTTCTGTCTCTCCATGCTCATTTTCAGGCTCTTCACAAACAAGCAAGATTGGT ATTAAAAGGACATTGTCTAGGACTACATCTGTTTTCTCATCTTCTGCTGCTCTGTTTGGG AAATTGAAAAGAGATGTGTTTTCATTTCGTGAAAATTCACGCCTGGATGGCACTAATCTA ATCCCTATCAGTGAGAATTCAGACCAGATAAACGGGAATGATCCAAAACTATTCAAATCA CAGACCATTCAAAGGATGTATAGTGCAAAAGATAGTTTTGTAACATCTTCATCAGAAATA AGTAATTTGAGTGGGACAACTCAGGAAACAGATCCAGTCACCCTCATGCTGAGTGGTCGT CAGGCTATCCTTCTGCTTTCCTCCTTGTGGACTCAGGCACTTTCACCTGAAAATGTTCCA CGAAATTATGAAGCAATTTCTCATACTTATTGCTTGATGCTACTGTTTTCTGAAGACAAG AAATCATGTCTTGAAGTTCTTGTTGGCAGCTTTCAGCTTGCTTTTTCATTGCAAAGCATT TCATTACAAGCAGGTTTTTTGCCACCATCACGCAGGCGTTCACTCTTTACTATGGCAACT TCTATGCTTGTGTTTTTCTCGAAAGCTTTTGGCATTCCATCTCTCATTCCTCTAGTGAAA GATTTGTTGACTACAAGCATAGTTGATCCATTTCTTCGTCTAGTTGAAGACTGCAAATTG CAGGTTGTTGAGTCTTGCTTGACAGTTTACGGTTCAAAAGACGACGATGATCTTGCTTTG AAATCTCTCTCAAACATCAACATCAATGATCAGTCAAAACAGGCATCAGTTTCTCTTATT CTCGATAGTTTGAAAGATTTATCGGAGGCTGAATTGTCTACTATAAGAAAGCAATTGCTT GAGGAGTTCTCAGCAGATGATGCCTGTCCCCTGGGTTCTCACTCGAATGAATCTACTTCA CAATCTCCTGCATATAATGCTAAGTTGCACCAAAAATCGTTGGAGGTTATTCCTGTCGGC TTTATTTTTGAGGATGATACCCTAGTTGAACCAGCTAACAGCTTAGCAGAACCTCAATTG CAACAACCTTTGGACAATGGCCTTATTGATGTGAATCAGCTTCTTGAATCAGTTGTGGAA ACATCTCGGCACGTTGGAAGACTATCAGTGTCAACAAACCTTGATTTGCCTTTTAAGGAG GTAGCAAACCGATGTGAAGCTCTTTTGATCGGAAAGCAGCAAAAGCTATCTGTCTGCATG AGCGTCCACCAAAAACAGGATGGTGAATCACCCATGGACAAGCTTGGGTCACCTCAGCAA ATTTCTCCAACGGCTGGGTTTGTATCAACGAACGACGAGCAATGTCACTCTGATTTCTGT AAGCTGCCGGTCCTGAGTCCCTACGATAAATTCCTTGCGGGCTCTGGCTGCTAA

Peptide Sequence

PEP ID	Os02t0780500-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:33054175:33066629:1 gene:Os02g0780500 transcript:Os02t0780500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SRL2-like gene, semi-rolled leaf 2-like gene description:Conserved hypothetical protein. (Os02t0780500-01)
Sequence	MTMGVVSREVLPACERLCFLCPSLRTRSRHPVKRYKKLLSEIFPKSQDEEPNDRKIGKLC EYISRNPLRVPKITVYLEQKFYKELRVEHFGSVKVVMAIYRKVICSCQEQLPLFANSLLN IVEALLEQNRQDDLRTIACRTLFYFVNNQVDSTYMFNLESQIPKLCQLAQEMGEKEKISI VHAAGLQALSSMVWFMGEHSHISAELDNVVSAVLENYESPYANSDNDAAIEDRRTQWVSE VLKAEDHEPSGITILTRVPSWKAIRAPRGELSLTTEESESPNFWSGICLHNLARISREAT TVRRVLEAIFRYFDNNNLWSPSKGLALCVLLDMQIVIEKSGQNSHILLSMLVKHLEHKNV LKQTDKILDIIEVTTRLAEHSKAQSSTALMAAISDMVRHLSKNMQLLVSDVGPGDGMVMN DRYGKATDECLVQLSRKVGDAGPILDALAVVLENISSTTPVARSTIAATYRTAQIIASLP NLLYQSKAFPEALFHQLLLAMVYPDCETHLGAHRIFSVVLVPSSVSPCSFSGSSQTSKIG IKRTLSRTTSVFSSSAALFGKLKRDVFSFRENSRLDGTNLIPISENSDQINGNDPKLFKS QTIQRMYSAKDSFVTSSSEISNLSGTTQETDPVTLMLSGRQAILLLSSLWTQALSPENVP RNYEAISHTYCLMLLFSEDKKSCLEVLVGSFQLAFSLQSISLQAGFLPPSRRRSLFTMAT SMLVFFSKAFGIPSLIPLVKDLLTTSIVDPFLRLVEDCKLQVVESCLTVYGSKDDDDLAL KSLSNININDQSKQASVSLILDSLKDLSEAELSTIRKQLLEEFSADDACPLGSHSNESTS QSPAYNAKLHQKSLEVIPVGFIFEDDTLVEPANSLAEPQLQQPLDNGLIDVNQLLESVVE TSRHVGRLSVSTNLDLPFKEVANRCEALLIGKQQKLSVCMSVHQKQDGESPMDKLGSPQQ ISPTAGFVSTNDEQCHSDFCKLPVLSPYDKFLAGSGC

Transcript Sequence

Transcript ID	Os02t0780500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:33054175:33066629:1 gene:Os02g0780500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SRL2-like gene, semi-rolled leaf 2-like gene description:Conserved hypothetical protein. (Os02t0780500-01)
Sequence	GAGGAGAGAGAGGAAGAGGAGGAGCGCCCTTCCCTTTCCCCTCCACCCGTTCGTCCGATC GGTCGCCCCGGATCGCGAGCCAGCTAGCCGATCGCCATCCTGCAGAACCCGGCTTGGATT TGGAGCGATGGTGCATCGTATTCGCTTTGTGGATGAGTAATGGTGGAGCCTAAGAAATCC CGATGACGATGGGTGTGGTGTCAAGGGAGGTATTGCCTGCATGCGAGAGGCTTTGCTTCC TTTGCCCGTCATTGCGCACGAGGTCTCGGCATCCGGTCAAGCGATACAAGAAGTTGCTCT CAGAAATCTTCCCTAAGTCACAGGATGAAGAACCCAATGACCGAAAGATCGGCAAATTGT GCGAATATATTTCGAGGAATCCTTTGCGTGTTCCAAAGATTACAGTTTATTTAGAGCAAA AATTCTACAAGGAATTGAGAGTTGAGCATTTTGGGTCAGTGAAAGTTGTCATGGCAATTT ACCGAAAGGTGATATGTTCTTGTCAGGAGCAACTGCCTCTTTTCGCCAATAGCTTGCTAA ACATCGTAGAAGCCCTATTGGAACAGAACAGACAGGATGACTTGCGGACAATAGCGTGTC GAACACTTTTTTACTTTGTAAACAACCAGGTTGACAGCACATACATGTTCAATTTAGAGA GCCAAATCCCTAAACTATGTCAACTGGCCCAAGAGATGGGTGAGAAGGAGAAGATATCCA TTGTTCATGCAGCTGGCCTCCAAGCCCTTTCATCCATGGTGTGGTTTATGGGTGAGCATT CCCATATCTCTGCAGAGCTCGACAACGTTGTCTCTGCAGTTCTGGAAAACTACGAGAGCC CATATGCAAATTCTGATAATGATGCTGCCATTGAGGATAGAAGGACTCAGTGGGTGAGTG AAGTTCTCAAAGCTGAAGATCATGAACCTTCCGGTATTACCATTTTGACAAGGGTTCCTT CATGGAAAGCCATTAGAGCTCCCCGCGGTGAATTAAGCCTGACAACTGAAGAATCAGAAA GTCCAAATTTTTGGTCAGGGATTTGTCTGCACAACCTTGCTAGAATATCCAGGGAAGCAA CAACAGTCCGACGAGTTCTGGAAGCTATATTTCGTTATTTTGATAACAACAATCTGTGGT CGCCTTCTAAAGGACTTGCATTGTGTGTCCTTTTGGATATGCAAATTGTGATAGAGAAAT CTGGACAGAATTCACATATATTGTTATCCATGTTAGTCAAGCATCTTGAACACAAGAATG TATTGAAGCAGACAGATAAGATTCTGGACATTATTGAGGTCACAACACGCCTTGCCGAGC ACTCCAAAGCTCAATCTTCTACTGCACTAATGGCTGCAATAAGTGATATGGTCAGGCATT TGAGTAAAAACATGCAGCTCTTGGTCAGTGATGTAGGTCCTGGGGATGGCATGGTTATGA ATGACAGATATGGGAAAGCTACCGATGAATGTCTTGTTCAGTTGTCTAGAAAGGTAGGCG ATGCTGGGCCTATCCTTGATGCGTTGGCTGTTGTCCTGGAGAACATTTCAAGTACTACAC CTGTTGCCCGGTCCACTATTGCTGCAACATATCGTACAGCTCAAATAATTGCATCATTGC CAAATCTGTTATACCAGAGCAAAGCATTTCCTGAGGCGTTATTTCATCAATTGCTTTTGG CAATGGTCTATCCAGATTGTGAGACACATTTAGGGGCACATCGGATTTTCTCTGTTGTTC TTGTTCCTTCTTCTGTCTCTCCATGCTCATTTTCAGGCTCTTCACAAACAAGCAAGATTG GTATTAAAAGGACATTGTCTAGGACTACATCTGTTTTCTCATCTTCTGCTGCTCTGTTTG GGAAATTGAAAAGAGATGTGTTTTCATTTCGTGAAAATTCACGCCTGGATGGCACTAATC TAATCCCTATCAGTGAGAATTCAGACCAGATAAACGGGAATGATCCAAAACTATTCAAAT CACAGACCATTCAAAGGATGTATAGTGCAAAAGATAGTTTTGTAACATCTTCATCAGAAA TAAGTAATTTGAGTGGGACAACTCAGGAAACAGATCCAGTCACCCTCATGCTGAGTGGTC GTCAGGCTATCCTTCTGCTTTCCTCCTTGTGGACTCAGGCACTTTCACCTGAAAATGTTC CACGAAATTATGAAGCAATTTCTCATACTTATTGCTTGATGCTACTGTTTTCTGAAGACA AGAAATCATGTCTTGAAGTTCTTGTTGGCAGCTTTCAGCTTGCTTTTTCATTGCAAAGCA TTTCATTACAAGCAGGTTTTTTGCCACCATCACGCAGGCGTTCACTCTTTACTATGGCAA CTTCTATGCTTGTGTTTTTCTCGAAAGCTTTTGGCATTCCATCTCTCATTCCTCTAGTGA AAGATTTGTTGACTACAAGCATAGTTGATCCATTTCTTCGTCTAGTTGAAGACTGCAAAT TGCAGGTTGTTGAGTCTTGCTTGACAGTTTACGGTTCAAAAGACGACGATGATCTTGCTT TGAAATCTCTCTCAAACATCAACATCAATGATCAGTCAAAACAGGCATCAGTTTCTCTTA TTCTCGATAGTTTGAAAGATTTATCGGAGGCTGAATTGTCTACTATAAGAAAGCAATTGC TTGAGGAGTTCTCAGCAGATGATGCCTGTCCCCTGGGTTCTCACTCGAATGAATCTACTT CACAATCTCCTGCATATAATGCTAAGTTGCACCAAAAATCGTTGGAGGTTATTCCTGTCG GCTTTATTTTTGAGGATGATACCCTAGTTGAACCAGCTAACAGCTTAGCAGAACCTCAAT TGCAACAACCTTTGGACAATGGCCTTATTGATGTGAATCAGCTTCTTGAATCAGTTGTGG AAACATCTCGGCACGTTGGAAGACTATCAGTGTCAACAAACCTTGATTTGCCTTTTAAGG AGGTAGCAAACCGATGTGAAGCTCTTTTGATCGGAAAGCAGCAAAAGCTATCTGTCTGCA TGAGCGTCCACCAAAAACAGGATGGTGAATCACCCATGGACAAGCTTGGGTCACCTCAGC AAATTTCTCCAACGGCTGGGTTTGTATCAACGAACGACGAGCAATGTCACTCTGATTTCT GTAAGCTGCCGGTCCTGAGTCCCTACGATAAATTCCTTGCGGGCTCTGGCTGCTAAGATG AATGTTACTTGGGGAATCGAAGAACACAGCCCGGCAAAAAGAATCGAAGAACACATTGTT GGCCCAATGTCTATCGACTAACAAAGAAAGGATACCTCAAAACCTTGGATATTCGGTGGT TTCTTGATTCATGCCTTCATGTATCCTTGTTATGCAAGATAAGATAATTGTTTGTATCTG GGCTCCCCGTTTTGTGTCACGTGTTGATTCGTACATGGCAGTAAGTTCATCTGCTCAATC GGGCAACCCTTCTTACTCATGAGAAGGAATATCAATTTTGGTGATTCTGTGGAAGGAATG AAATACTGTCAGCTCCAACAATGGCCTTCTTCGTCTGCAGGGTACAGCCTATGCATTCGC TGTTGTTGACACAAGACACTGTACAGGCTACAACGCGCAGCCAGCCATGGGGAATGCAGC AGAACGAGCCCAAATATTGATTTTGTTGTTGTTATTGTTGATAGGGTTTTTTTAGAAACA AATCATAATAATTGAGGTTTTATATTACGGATTCTTCAATACTTAAGGTTTTGTGAAACT TACTAGATTTAAGAAGTTACGGCAATTTCAAACAAAGCCTAAGTGGTTGTACACTTTTAT GTCTAAATTGACTTTACTAAATTTCAGTAGTGCCAAATTTTGGCATTGTCC