Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0778300-02
CDS Infomation

cds chromosome:IRGSP-1.0:2:32945682:32950731:1 gene:Os02g0778300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0778300-01);Similar to predicted protein. (Os02t0778300-02);Non-protein coding transcript. (Os02t0778300-03)
Sequence

ATGCCTTCAGGATGTATAATTCTTCTTTCATGTAGGTTTATTGACTTGCTACATGAAGCT
CCTCTCTCTGGTCATCGAGAGCCTAGAAGCATTGTTGGTGGCACCTTGTACTGTATCTTG
TTGGCAGGTTATGCTGCTGTGGCAGTGTCAGCCCCATGGATATTTTACCTTGTACCAGAC
ATGATCCCCCCATTGCTATGCAGCTCCAATGTTATCATTCTGATTCTAACAGGTATTTTT
CAACAATATTGGGTTCACCAGGTCAGAAAAGTGAGATTGCAGGGGTATTACGATTTTAGT
GAGAAATTGAAGCGCCTTGCTCAACTTCCATTTGCCACCGTTGCTAGTGGCGTTGCTTCA
ATGCTCTTAATCATAGTCTGGCAACCTCTAGTACACATACTATCGGTTTCTTTATTGCTA
AGGATTGCTATTGTGGTTGAAGCTATATGTGCTGGATGTTTCATGAGCTTATACTTATGG
CATATCCACAAGTACAACTCTCTGAATGGGCACCCTGATATTTTGCGGTCCTTATATTCT
GCACTCCAACTCCAACCATCTAGTTCTTTGGAAGAACGAAGGTATTATGATGGTCGTTTT
TCTGACCAGCAAATGGCTCTGCTTCAGTACCAAAGGGAGAATATTCATTACCTGAGTGAG
GAGGTGCTCCGCTTGCAAGAATGCTTAAGCAAATACCAGAGAACTGATGTTGGGAGCACT
CCTCAGGCCGATCTTGCTCATCTATTAGCATCGCGTGATCAAGAACTTAGAGCACTCTCC
GCTGAGATGAATCAAGTGCATTCAGAGCTTCAACTTGCACGTAGTCTGATTGATGAAAAG
GACTCAGAGATCCAGCGCATTCGTGTGAGCAATAATCAGTATATTGAAGAAAATGATAGA
CTCAGAGCCATTCTTGGAGAATGGAGCGCTCGAGCAGCAAAGCTTGAAAGAGCACTGGAG
GCAGAGCAAATATCGAGCATTGAATTACGGAAGAACATTGCAAAACTCCGAGGGCAGACT
TACAAGGATCAAAACACCTGA

Peptide Sequence

PEP ID

Os02t0778300-02
PEP Infomation

pep chromosome:IRGSP-1.0:2:32945682:32950731:1 gene:Os02g0778300 transcript:Os02t0778300-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0778300-01);Similar to predicted protein. (Os02t0778300-02);Non-protein coding transcript. (Os02t0778300-03)
Sequence

MPSGCIILLSCRFIDLLHEAPLSGHREPRSIVGGTLYCILLAGYAAVAVSAPWIFYLVPD
MIPPLLCSSNVIILILTGIFQQYWVHQVRKVRLQGYYDFSEKLKRLAQLPFATVASGVAS
MLLIIVWQPLVHILSVSLLLRIAIVVEAICAGCFMSLYLWHIHKYNSLNGHPDILRSLYS
ALQLQPSSSLEERRYYDGRFSDQQMALLQYQRENIHYLSEEVLRLQECLSKYQRTDVGST
PQADLAHLLASRDQELRALSAEMNQVHSELQLARSLIDEKDSEIQRIRVSNNQYIEENDR
LRAILGEWSARAAKLERALEAEQISSIELRKNIAKLRGQTYKDQNT

Transcript Sequence

Transcript ID

Os02t0778300-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:32945682:32950731:1 gene:Os02g0778300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0778300-01);Similar to predicted protein. (Os02t0778300-02);Non-protein coding transcript. (Os02t0778300-03)
Sequence

CTAGGCCATTCCCCCTCTCGTGGCCGGTCGCCGGAGATCCATCACCCGCCGTCGCCCGCT
CTCCCCGGCGATCCTCCCCGAGCCGCGCGCTCGCTTCCCCCGTTGTCACCAACCTCCACG
CAGGATCCGCACCGCCGCTTCTTCTCTGCCCCCAACCGCCCAATCCCCTATCCCTCGCGA
GACTTTGCACGCTTAAGCCTTAAGCTTCTACTACCATTTGGATCCGGAGACCGGGAGAAG
TTGGAGGGCACGGACTCCGGAGGCGTCACCCGCGGGAGGTCCCCTCTGCACCGGCCGGCT
GCGGGCGCGGCTCTGATGGCGCACGAGCGTGGCGGCGCCGCGTCGTCCGCCGCGGCTCCC
GCCACCGAGGAGGATGCGCTGTGAGTCTGTGTTGCCCAAATCCCTAGGTCCGTGTATTCC
TAGTAGACGTTTCAGTCACGCTTCTGGTGTCACTTGATCTGAAGGCCGTGGCGATTGCAG
CGAAATTCAGGGTCCTTCTCTTGTTAGTGTCGTGATGCGTTCAGTGTAGTCGAAAATTTG
GTGGTTCACTTGGGCTCTGGCATTGCGATGTAGTACTAAATTTTGGGCGTATGCAGGGAA
TTGAGACTTTGAGAGAAGGGAAGAGAAGAGCACAGGTGATGTTTGCTTGTGGTATCCCTC
CAGTTGGTATTAATTCATAAAATTGGCCGTGTACATCCAAACCGGATGTAGAGGCCAGGT
TTTAATCCATCTTCTAGTAGAAAATTTAATTCATAAAATGAGGAGTATAAGCAAGGGTGA
CATGGTGTCCATTAAGGCATTAATACAGGGTCACTTAGTTGAGCTGACTTAGCATTCACA
TGATTCTTCTATGACATTGTTCTAATGTTGATTTGTCTCGATGCCTTCAGGATGTATAAT
TCTTCTTTCATGTAGGTTTATTGACTTGCTACATGAAGCTCCTCTCTCTGGTCATCGAGA
GCCTAGAAGCATTGTTGGTGGCACCTTGTACTGTATCTTGTTGGCAGGTTATGCTGCTGT
GGCAGTGTCAGCCCCATGGATATTTTACCTTGTACCAGACATGATCCCCCCATTGCTATG
CAGCTCCAATGTTATCATTCTGATTCTAACAGGTATTTTTCAACAATATTGGGTTCACCA
GGTCAGAAAAGTGAGATTGCAGGGGTATTACGATTTTAGTGAGAAATTGAAGCGCCTTGC
TCAACTTCCATTTGCCACCGTTGCTAGTGGCGTTGCTTCAATGCTCTTAATCATAGTCTG
GCAACCTCTAGTACACATACTATCGGTTTCTTTATTGCTAAGGATTGCTATTGTGGTTGA
AGCTATATGTGCTGGATGTTTCATGAGCTTATACTTATGGCATATCCACAAGTACAACTC
TCTGAATGGGCACCCTGATATTTTGCGGTCCTTATATTCTGCACTCCAACTCCAACCATC
TAGTTCTTTGGAAGAACGAAGGTATTATGATGGTCGTTTTTCTGACCAGCAAATGGCTCT
GCTTCAGTACCAAAGGGAGAATATTCATTACCTGAGTGAGGAGGTGCTCCGCTTGCAAGA
ATGCTTAAGCAAATACCAGAGAACTGATGTTGGGAGCACTCCTCAGGCCGATCTTGCTCA
TCTATTAGCATCGCGTGATCAAGAACTTAGAGCACTCTCCGCTGAGATGAATCAAGTGCA
TTCAGAGCTTCAACTTGCACGTAGTCTGATTGATGAAAAGGACTCAGAGATCCAGCGCAT
TCGTGTGAGCAATAATCAGTATATTGAAGAAAATGATAGACTCAGAGCCATTCTTGGAGA
ATGGAGCGCTCGAGCAGCAAAGCTTGAAAGAGCACTGGAGGCAGAGCAAATATCGAGCAT
TGAATTACGGAAGAACATTGCAAAACTCCGAGGGCAGACTTACAAGGATCAAAACACCTG
ATCTCCCTTGTTTTCAGGATATATTCACCTATGGCGATGTTTGAGCAGGTTTATCAACTC
TTCAGCTGCTAAAGGTGCCACCTGTGATATCCTTGAATTCCAAACCTCTAGTGATAAGAA
GAGTGCCAACACAGTCCAGTTTCGCTAACAACAAAGCAAGGTACAAGATCATCACTCAAT
CTGATATGCATCAAGGAAAGGAAAAATGCCTTTGCTACACCTCTCTCGTGAATGTACAGA
TTGATGTTTGTAAATGTTGTTCGAGAGTATGGTGCAGCACTGGTTTTTTGTGCTTCTACC
TGATGCTTCTACAATGACATCTTATCATGGCAAGAGTTGTGCATTGTTTTCTGAGCACTT
GCGAAATGAAAAGTGAGCATTTGTGCCTAAGCTCCCCCAAAAAGGTATATCAGACTTCTA
ATTTCTTC