Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0778200-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:32934164:32945149:1 gene:Os02g0778200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Isoleucyl-tRNA synthetase domain containing protein. (Os02t0778200-01);Similar to predicted protein. (Os02t0778200-02)
Sequence	ATGGACGCCGCCTCCTGCTGCCGCGTCTTCTCGACGCAGAGATGCCGCTTCCCGCTGCGG AGGCTGGCGCCGCCGATTTCGCGGCGGCCGTTCGGCACGGAGTCGACGAGTGAGCTGTTC GCCGCGTCGACCTCGAAGCGGCGCTCCCGGGGGCCCGTCATGGCGGCGAAGAAGGCCGCC GAGGGTGCTAAACAAGAAGAGGGGAAATACAAACACACGGTGGATCTACCAAAGACAACT TTTGGCTTGAGAGCTAATTCTGTTGTGCGGGAGCCGGAGCTCCAGAAGTTGTGGGAGGAG AACCAGGTGCTCAAGAGGGTATCAGAAAGGAACACTGGGGCTACATTTGTTCTCCATGAT GGTCCTCCTTATGCTAATGGTGATCTTCATATGGGCCATGCACTGAATAAAATCCTCAAA GATATTATAAACCGTTACAAGCTGCTTCAGAATCACAAAGTTTCTTTTATTCCTGGATGG GATTGCCATGGCCTTCCAATCGAATTAAAAGTTCTAAAGTCACTGGACAAGGAAACATTG AATGCTCTGACACCTATAAAATTAAGGCAGAAGGCTGCAAAATTTGCTAAAGCGACGGTT ACTACACAAATGAATTCTTTCAAGCGGTTTGGTGTATGGGCAGATTGGGACAACCCTTAT CTAACTCTGTCACCAGAGTATGAAGCTGCTCAGCTAGAAGTTTTCGGCCAAATGGTTATG AAAGGATATATCTACCGCGGGCGAAAACCTGTTCATTGGAGTCCGTCATCACGTACAGCT TTAGCAGAAGCTGAGTTGGAGTATTCAGAAAATCATATTTCCAAAAGCATGTATGCTGCA TTCAAGATCACCAATCTGTCTAAGCCTGGGTTGCTGGAGGAATTTCTCCCTAATTTATGC CTAGCCATATGGACCACTACTCCATGGACGATTCCTGCTAATGCTGCTGTTGCTGTGAAC CCTGAGCTCACTTATGTAGTAGTTGAGCTGCAATCTGTACTAGAAAGTGAATCAACATCT GGTGGAAATCAACGAAAGCTTGGGAGTATTTTGAGCCCTGGGAGTCAGAAACCATTTATC ATCGTGGCTGCTGATCTTGTCTCAGCTCTAGAGTCCAAGTGGGGTACAAAGCTTATAATC CAGAAATCATTTCCTGGGTCAGCCTTGGAGCACTGCAGGTATATTCATCCTGTGAATGGC AATGAATGTTCTGTTGTTCTTGGAGGAGATTACATAACAACTGAATCTGGCACTGGCCTT GTTCATACTGCCCCTGGCCATGGTCAGGAAGACTACATAACAGGTTTGAAATATGGGCTT CCTATTGTGTCTCCTGTGGATGATGAAGGAAACTTCACTGCTGAAGCTGGACAATTCAGT GGTTTATCTGTTCTGGGAGCTGGTAATGCCGCGGTTGTGAATTATCTGGATGAACAGTGT TCTCTCATTTTAGAGGAGCCTTACAAACACAAGTACCCCTATGACTGGCGGTCTAAAGAA CCAACAATATTCCGAGCAACTGAACAATGGTTTGCCTCGGTGGATGGTTTCCGTAATGCT GCAATGGATGCAATTAGGCGAGTATCTTGGATTCCTTCTCAGGCTGAAAATAGGATTGTG GCCATGACTTCAAGCCGTTCTGACTGGTGTATTTCGCGGCAGAGAACTTGGGGGGTTCCT ATTCCGGTCTTCTATCATGTAGACTCGAATGAACCTCTTATAACTGAAGAAACTATTGAA CACATCAAGGGTATAGTGTCAAAGAAAGGGAGTGATGCCTGGTGGTATATGACAATTGAG GAACTTCTTCCTGAAAAATATCGTGATAAAGCATCTGAGTATCGCAAGGGAACTGATACA ATGGACGTTTGGTTTGACTCTGGCTCCTCATGGGCTGCTGTTTTGGCACAAAGAGATGGC CTTAATTTTCCAGCGGATATATACCTTGAAGGTTCAGACCAACACCGTGGATGGTTTCAG AGCTCATTGTTAACCAGCATTGCTACTACAGGAAAGGCTCCATATTCTAGTGTTATAACC CATGGTTTTGTACTGGACGAAAAGGGTTTCAAGATGAGCAAATCTCTTGGTAATGTGGTT GATCCTGAGAAAGTAATTGTTGGTGGTAAAAATTCAAAGCAAGAACCTGGCTATGGAGCA GACGTTCTTCGGCTATGGGTTTCTAGTGTTGATTACACTGGAGATGTGTTGGTTGGTCCA CAAATTTTGCGCCAAATGTCTGACATGTACCGAAAGCTACGAGGCACAATGCGATTCCTA TTGTCGAATCTCCATGATTGGAAACCAGAAAATTCTGTGCGCTACAGTGATCTACCGAAA ATTGACAAGTATGCACTTTTCCAACTGGAAAATGTTGTGACTTCCATGAAGGATAGCTAC GAGAACTACCAATTCTATAAAATATACCAGATCCTCCAAAGATTTGCTATTGTTGATCTC TCCAATTTCTATTTGGATGTTGCAAAGGATCGACTCTATGTTGGTGGCCGAGTTAGCTTT ACAAGGAAAAGCTGTCAGACAGTCCTCAGTGCGCATCTGCTCTATCTTGTTAGAGCCATT GCCCCCATTATGCCACATCTAGCTGAGGATGTATGGCAGAACCTACCGTTTCAACACACA CTGGATGATGGATCTGTTGCTGAGTTTGTTTTTAATCTAAAATGGCCAGTTAAGAATGAA GAATGGCTCTCGGTTCCAAAGGATGATGTTGATTTTCTGAGTGTTATCCTCGAGTTGAGA TCAGAGGTGAACAAAATTTTGGAGAGTGCTCGAACAGGAAAGCTGATAGGCTCTAGCTTA GAGGCAAAAGTTTATCTCCACGCGGAAAATGCTAACACAGTGTCCAAACTAAAGGAGCTG GTTTCGGCAACCAATGACGCTGATGCTCTGCACCGCCTGTTTATCACATCTGAGGTGGAG ATCCTTCCTTCCGTAAGCTCCGAAACTACATCTGGTGTATCCTACACTGGAACTTTTAGC AGTGAGCGCACCGGCAACATCTGGATTGGTGTGACTCGCGCCGATGGCGAAAAATGTGAG AGGTGCTGGAATTATACCCGAGACGTTGGATCTTTCCTTGACCATCCTACTCTTTGTGCC CGGTGCCACGGTGTCATTGATCTGCCACCAGTTCCTGCTGCCGCGGCTGTCAGCTGA

Peptide Sequence

PEP ID	Os02t0778200-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:32934164:32945149:1 gene:Os02g0778200 transcript:Os02t0778200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Isoleucyl-tRNA synthetase domain containing protein. (Os02t0778200-01);Similar to predicted protein. (Os02t0778200-02)
Sequence	MDAASCCRVFSTQRCRFPLRRLAPPISRRPFGTESTSELFAASTSKRRSRGPVMAAKKAA EGAKQEEGKYKHTVDLPKTTFGLRANSVVREPELQKLWEENQVLKRVSERNTGATFVLHD GPPYANGDLHMGHALNKILKDIINRYKLLQNHKVSFIPGWDCHGLPIELKVLKSLDKETL NALTPIKLRQKAAKFAKATVTTQMNSFKRFGVWADWDNPYLTLSPEYEAAQLEVFGQMVM KGYIYRGRKPVHWSPSSRTALAEAELEYSENHISKSMYAAFKITNLSKPGLLEEFLPNLC LAIWTTTPWTIPANAAVAVNPELTYVVVELQSVLESESTSGGNQRKLGSILSPGSQKPFI IVAADLVSALESKWGTKLIIQKSFPGSALEHCRYIHPVNGNECSVVLGGDYITTESGTGL VHTAPGHGQEDYITGLKYGLPIVSPVDDEGNFTAEAGQFSGLSVLGAGNAAVVNYLDEQC SLILEEPYKHKYPYDWRSKEPTIFRATEQWFASVDGFRNAAMDAIRRVSWIPSQAENRIV AMTSSRSDWCISRQRTWGVPIPVFYHVDSNEPLITEETIEHIKGIVSKKGSDAWWYMTIE ELLPEKYRDKASEYRKGTDTMDVWFDSGSSWAAVLAQRDGLNFPADIYLEGSDQHRGWFQ SSLLTSIATTGKAPYSSVITHGFVLDEKGFKMSKSLGNVVDPEKVIVGGKNSKQEPGYGA DVLRLWVSSVDYTGDVLVGPQILRQMSDMYRKLRGTMRFLLSNLHDWKPENSVRYSDLPK IDKYALFQLENVVTSMKDSYENYQFYKIYQILQRFAIVDLSNFYLDVAKDRLYVGGRVSF TRKSCQTVLSAHLLYLVRAIAPIMPHLAEDVWQNLPFQHTLDDGSVAEFVFNLKWPVKNE EWLSVPKDDVDFLSVILELRSEVNKILESARTGKLIGSSLEAKVYLHAENANTVSKLKEL VSATNDADALHRLFITSEVEILPSVSSETTSGVSYTGTFSSERTGNIWIGVTRADGEKCE RCWNYTRDVGSFLDHPTLCARCHGVIDLPPVPAAAAVS

Transcript Sequence

Transcript ID	Os02t0778200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:32934164:32945149:1 gene:Os02g0778200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Isoleucyl-tRNA synthetase domain containing protein. (Os02t0778200-01);Similar to predicted protein. (Os02t0778200-02)
Sequence	GCTTCTCCGGTGGTTCTCTTCTCTTCTCTTATCCCCCGGAGACGCCGCTGCGGCGCCACC CCCTCCTCGCCGTGGACCTCGGGGTGGGAGCGTGGCGGCCTGCACAGCCGGAGCTCAGCT CGCCCGCCGCGTCGGATGGACGCCGCCTCCTGCTGCCGCGTCTTCTCGACGCAGAGATGC CGCTTCCCGCTGCGGAGGCTGGCGCCGCCGATTTCGCGGCGGCCGTTCGGCACGGAGTCG ACGAGTGAGCTGTTCGCCGCGTCGACCTCGAAGCGGCGCTCCCGGGGGCCCGTCATGGCG GCGAAGAAGGCCGCCGAGGGTGCTAAACAAGAAGAGGGGAAATACAAACACACGGTGGAT CTACCAAAGACAACTTTTGGCTTGAGAGCTAATTCTGTTGTGCGGGAGCCGGAGCTCCAG AAGTTGTGGGAGGAGAACCAGGTGCTCAAGAGGGTATCAGAAAGGAACACTGGGGCTACA TTTGTTCTCCATGATGGTCCTCCTTATGCTAATGGTGATCTTCATATGGGCCATGCACTG AATAAAATCCTCAAAGATATTATAAACCGTTACAAGCTGCTTCAGAATCACAAAGTTTCT TTTATTCCTGGATGGGATTGCCATGGCCTTCCAATCGAATTAAAAGTTCTAAAGTCACTG GACAAGGAAACATTGAATGCTCTGACACCTATAAAATTAAGGCAGAAGGCTGCAAAATTT GCTAAAGCGACGGTTACTACACAAATGAATTCTTTCAAGCGGTTTGGTGTATGGGCAGAT TGGGACAACCCTTATCTAACTCTGTCACCAGAGTATGAAGCTGCTCAGCTAGAAGTTTTC GGCCAAATGGTTATGAAAGGATATATCTACCGCGGGCGAAAACCTGTTCATTGGAGTCCG TCATCACGTACAGCTTTAGCAGAAGCTGAGTTGGAGTATTCAGAAAATCATATTTCCAAA AGCATGTATGCTGCATTCAAGATCACCAATCTGTCTAAGCCTGGGTTGCTGGAGGAATTT CTCCCTAATTTATGCCTAGCCATATGGACCACTACTCCATGGACGATTCCTGCTAATGCT GCTGTTGCTGTGAACCCTGAGCTCACTTATGTAGTAGTTGAGCTGCAATCTGTACTAGAA AGTGAATCAACATCTGGTGGAAATCAACGAAAGCTTGGGAGTATTTTGAGCCCTGGGAGT CAGAAACCATTTATCATCGTGGCTGCTGATCTTGTCTCAGCTCTAGAGTCCAAGTGGGGT ACAAAGCTTATAATCCAGAAATCATTTCCTGGGTCAGCCTTGGAGCACTGCAGGTATATT CATCCTGTGAATGGCAATGAATGTTCTGTTGTTCTTGGAGGAGATTACATAACAACTGAA TCTGGCACTGGCCTTGTTCATACTGCCCCTGGCCATGGTCAGGAAGACTACATAACAGGT TTGAAATATGGGCTTCCTATTGTGTCTCCTGTGGATGATGAAGGAAACTTCACTGCTGAA GCTGGACAATTCAGTGGTTTATCTGTTCTGGGAGCTGGTAATGCCGCGGTTGTGAATTAT CTGGATGAACAGTGTTCTCTCATTTTAGAGGAGCCTTACAAACACAAGTACCCCTATGAC TGGCGGTCTAAAGAACCAACAATATTCCGAGCAACTGAACAATGGTTTGCCTCGGTGGAT GGTTTCCGTAATGCTGCAATGGATGCAATTAGGCGAGTATCTTGGATTCCTTCTCAGGCT GAAAATAGGATTGTGGCCATGACTTCAAGCCGTTCTGACTGGTGTATTTCGCGGCAGAGA ACTTGGGGGGTTCCTATTCCGGTCTTCTATCATGTAGACTCGAATGAACCTCTTATAACT GAAGAAACTATTGAACACATCAAGGGTATAGTGTCAAAGAAAGGGAGTGATGCCTGGTGG TATATGACAATTGAGGAACTTCTTCCTGAAAAATATCGTGATAAAGCATCTGAGTATCGC AAGGGAACTGATACAATGGACGTTTGGTTTGACTCTGGCTCCTCATGGGCTGCTGTTTTG GCACAAAGAGATGGCCTTAATTTTCCAGCGGATATATACCTTGAAGGTTCAGACCAACAC CGTGGATGGTTTCAGAGCTCATTGTTAACCAGCATTGCTACTACAGGAAAGGCTCCATAT TCTAGTGTTATAACCCATGGTTTTGTACTGGACGAAAAGGGTTTCAAGATGAGCAAATCT CTTGGTAATGTGGTTGATCCTGAGAAAGTAATTGTTGGTGGTAAAAATTCAAAGCAAGAA CCTGGCTATGGAGCAGACGTTCTTCGGCTATGGGTTTCTAGTGTTGATTACACTGGAGAT GTGTTGGTTGGTCCACAAATTTTGCGCCAAATGTCTGACATGTACCGAAAGCTACGAGGC ACAATGCGATTCCTATTGTCGAATCTCCATGATTGGAAACCAGAAAATTCTGTGCGCTAC AGTGATCTACCGAAAATTGACAAGTATGCACTTTTCCAACTGGAAAATGTTGTGACTTCC ATGAAGGATAGCTACGAGAACTACCAATTCTATAAAATATACCAGATCCTCCAAAGATTT GCTATTGTTGATCTCTCCAATTTCTATTTGGATGTTGCAAAGGATCGACTCTATGTTGGT GGCCGAGTTAGCTTTACAAGGAAAAGCTGTCAGACAGTCCTCAGTGCGCATCTGCTCTAT CTTGTTAGAGCCATTGCCCCCATTATGCCACATCTAGCTGAGGATGTATGGCAGAACCTA CCGTTTCAACACACACTGGATGATGGATCTGTTGCTGAGTTTGTTTTTAATCTAAAATGG CCAGTTAAGAATGAAGAATGGCTCTCGGTTCCAAAGGATGATGTTGATTTTCTGAGTGTT ATCCTCGAGTTGAGATCAGAGGTGAACAAAATTTTGGAGAGTGCTCGAACAGGAAAGCTG ATAGGCTCTAGCTTAGAGGCAAAAGTTTATCTCCACGCGGAAAATGCTAACACAGTGTCC AAACTAAAGGAGCTGGTTTCGGCAACCAATGACGCTGATGCTCTGCACCGCCTGTTTATC ACATCTGAGGTGGAGATCCTTCCTTCCGTAAGCTCCGAAACTACATCTGGTGTATCCTAC ACTGGAACTTTTAGCAGTGAGCGCACCGGCAACATCTGGATTGGTGTGACTCGCGCCGAT GGCGAAAAATGTGAGAGGTGCTGGAATTATACCCGAGACGTTGGATCTTTCCTTGACCAT CCTACTCTTTGTGCCCGGTGCCACGGTGTCATTGATCTGCCACCAGTTCCTGCTGCCGCG GCTGTCAGCTGAGGCTGCTCGAGAGTGACAAGGACCACTATCAGCTTCATTTGAAGATTA TAGGTGGAATTAATTGTTTTTGTTCTACAATTTTGTTCCCCTCTGACCGATGATGCTAGA GGAAGGGGAAACTTGAAGAGGGTTTCGGAAACTTAGTTTCTAACTTCATTTGTTGCGTAC AATAAGTTGTACCTTGATTTTTGACCATTGCTTGGCTTCCTGGAGCTGTAATTGTATATT TGTATTGCAGAACTCACACGGATTAAAGATGGAAACAGTTTTGC