Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0773300-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:32645001:32648453:-1 gene:Os02g0773300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pyridoxal phosphate-dependent deaminase family protein. (Os02t0773300-01)
Sequence	ATGGCCGGAGTTTCCGCCGCCTCCGCCGCCGGGAAGATCGGGAGCTTCCTCTCCAAGAGG CCGTACGCGCCGCCGTCCTGGGCCTCGCACCTGTCCCCCGCCCCCTCGCAGACCTTCTCG CTCGGCCATTTCCCGACGCCGATCCACAAGTGGAATCTGCCCAATTTGCCGAATGGCACG GAGGTGTGGATCAAGCGAGACGACATCTCAGGCATGCAGTTGAGCGGGAACAAGGTCCGG AAGCTCGAGTTCCTGATGGCAGATGCCGTCGCGCAGGGCGCTGACTGCGTTATAACTGTA GGTGGCATCCAGAGCAATCACTGCCGTGCCACCGCAGTGGCTGCAAAGTATATAAATCTT GATTGTTATCTGATACTGCGCACATCCAAGCTTCTTGTGGATAAGGACCCTGGTTTGGTT GGGAATCTCCTTGTTGAGAGATTGGTGGGAGCGCATATTGATCTTGTTTCAAAAGAAGAA TATGGAAAAATTGGCAGTGTGGCTTTAGCGGACTTGCTGAAAAAGAAGCTTTTGGAAGAA GGCCGAAAACCATATGTTATTCCTGTTGGTGGATCAAACTCTCTAGGAACTTGGGGATAT ATAGAAGCAATAAGGGAGATTGAACATCAAATTCAGATATCAGGTGATGTTCAGTTTGAC GACATTGTTGTTGCATGTGGCAGCGGTGGAACCATTGCTGGTCTTGCTTTAGGATCAAAA TTGAGTAGCTTAAAGGCAAAAGTCCATGCTTTCTCTGTTTGTGATGATCCTGGATATTTC CATTCCTATGTTCAAGACCTGATTGATGGACTTCATTCTGATTTGCGTTCACATGATTTA GTCAACATTGAAAATGCTAAGGGCTTAGGTTATGCCATGAACACAGCTGAGGAGCTTAAG TTTGTTAAAGATATAGCTACAGCAACAGGCATTGTCCTTGATCCAGTCTACAGTGGAAAG GCAGCATATGGAATGCTGAAAGACATGGGTGCTAATCCAGCTAAGTGGGAAGGGCGAAAA ATTCTTTTTGTACATACAGGTGGTCTTCTTGGTTTGTATGATAAGGTTGATGAGTTATCA TCTTTGAGTGGGAGTTGGCGCAGAATGGATCTTGAAGAATCTGTTCCACGCAAAGATGGA ACTGGTAAGATGTTCTGA

Peptide Sequence

PEP ID	Os02t0773300-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:32645001:32648453:-1 gene:Os02g0773300 transcript:Os02t0773300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pyridoxal phosphate-dependent deaminase family protein. (Os02t0773300-01)
Sequence	MAGVSAASAAGKIGSFLSKRPYAPPSWASHLSPAPSQTFSLGHFPTPIHKWNLPNLPNGT EVWIKRDDISGMQLSGNKVRKLEFLMADAVAQGADCVITVGGIQSNHCRATAVAAKYINL DCYLILRTSKLLVDKDPGLVGNLLVERLVGAHIDLVSKEEYGKIGSVALADLLKKKLLEE GRKPYVIPVGGSNSLGTWGYIEAIREIEHQIQISGDVQFDDIVVACGSGGTIAGLALGSK LSSLKAKVHAFSVCDDPGYFHSYVQDLIDGLHSDLRSHDLVNIENAKGLGYAMNTAEELK FVKDIATATGIVLDPVYSGKAAYGMLKDMGANPAKWEGRKILFVHTGGLLGLYDKVDELS SLSGSWRRMDLEESVPRKDGTGKMF

Transcript Sequence

Transcript ID	Os02t0773300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:32645001:32648453:-1 gene:Os02g0773300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pyridoxal phosphate-dependent deaminase family protein. (Os02t0773300-01)
Sequence	GGGTTTTGGACTGTAGCTGCTGCCCCGACGCGCTGCTCGCTGCCCCACTCTCTCCCCATT CCCCTCCACGCCGCCGCCGCCGCCGCCGCGTGGATGGCCGGAGTTTCCGCCGCCTCCGCC GCCGGGAAGATCGGGAGCTTCCTCTCCAAGAGGCCGTACGCGCCGCCGTCCTGGGCCTCG CACCTGTCCCCCGCCCCCTCGCAGACCTTCTCGCTCGGCCATTTCCCGACGCCGATCCAC AAGTGGAATCTGCCCAATTTGCCGAATGGCACGGAGGTGTGGATCAAGCGAGACGACATC TCAGGCATGCAGTTGAGCGGGAACAAGGTCCGGAAGCTCGAGTTCCTGATGGCAGATGCC GTCGCGCAGGGCGCTGACTGCGTTATAACTGTAGGTGGCATCCAGAGCAATCACTGCCGT GCCACCGCAGTGGCTGCAAAGTATATAAATCTTGATTGTTATCTGATACTGCGCACATCC AAGCTTCTTGTGGATAAGGACCCTGGTTTGGTTGGGAATCTCCTTGTTGAGAGATTGGTG GGAGCGCATATTGATCTTGTTTCAAAAGAAGAATATGGAAAAATTGGCAGTGTGGCTTTA GCGGACTTGCTGAAAAAGAAGCTTTTGGAAGAAGGCCGAAAACCATATGTTATTCCTGTT GGTGGATCAAACTCTCTAGGAACTTGGGGATATATAGAAGCAATAAGGGAGATTGAACAT CAAATTCAGATATCAGGTGATGTTCAGTTTGACGACATTGTTGTTGCATGTGGCAGCGGT GGAACCATTGCTGGTCTTGCTTTAGGATCAAAATTGAGTAGCTTAAAGGCAAAAGTCCAT GCTTTCTCTGTTTGTGATGATCCTGGATATTTCCATTCCTATGTTCAAGACCTGATTGAT GGACTTCATTCTGATTTGCGTTCACATGATTTAGTCAACATTGAAAATGCTAAGGGCTTA GGTTATGCCATGAACACAGCTGAGGAGCTTAAGTTTGTTAAAGATATAGCTACAGCAACA GGCATTGTCCTTGATCCAGTCTACAGTGGAAAGGCAGCATATGGAATGCTGAAAGACATG GGTGCTAATCCAGCTAAGTGGGAAGGGCGAAAAATTCTTTTTGTACATACAGGTGGTCTT CTTGGTTTGTATGATAAGGTTGATGAGTTATCATCTTTGAGTGGGAGTTGGCGCAGAATG GATCTTGAAGAATCTGTTCCACGCAAAGATGGAACTGGTAAGATGTTCTGATTGCTATGC TCCAAAATTGCTTCCATTGTTGTTAGAGGTTTCAGACATCTCATTGTCTAAAAAGAGTAT TCGCCTCAATTTGTACGACAAAATTCAAAGCAGATGGTTAATGTAAAACACTGTTTGTTA TATTTAAAGAATAAAGCATATATTTCTGCCATTTGG