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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0773200-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:32643551:32644836:1 gene:Os02g0773200 gene_biotype:protein_coding transcript_biotype:protein_coding description:UspA domain containing protein. (Os02t0773200-01)
Sequence

ATGGCGGCTGAGAAGCGAACCATTGGGCTCGGCATGGACTACTCGCCGTCGAGCAAGGCC
GCGGCGAAGTGGGCGGTGGATAACCTGGTGAAGGCCGGCGACCGGATCATCCTCGTCCAT
GTCCTTCCCAAAGGAGCAGATGCCAGCCACAAGGAGCTCTGGAAGAGCACCGGCTCACCT
TTGATTCCTCTGCTGGAGTTTATGGAGATGAACGTGCAGGCGAGGTATGGGATCAACCCC
GATAAGGAGGTACTGGAGATCCTGCAAGCTGAATCCAAGTCCAAGCAGGTTGAAGTACTG
GCAAAAGTTTACTGGGGTGATGCAAGGGAGAAACTCTGTGAGGCAGTAGACGATCTCAAG
GTGAATACCTTTGTTCTTGGTTGCAGGGGACTAGGACCCTTGAAAAGGGCCCTACTTGGA
AGTGTTAGCAACTATGTTGTCAACAATGCAACCTGCCCGGTTACTGTGGTGCGTGCACCA
ACCGTGTCAAATGCCTGA

Peptide Sequence

PEP ID

Os02t0773200-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:32643551:32644836:1 gene:Os02g0773200 transcript:Os02t0773200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:UspA domain containing protein. (Os02t0773200-01)
Sequence

MAAEKRTIGLGMDYSPSSKAAAKWAVDNLVKAGDRIILVHVLPKGADASHKELWKSTGSP
LIPLLEFMEMNVQARYGINPDKEVLEILQAESKSKQVEVLAKVYWGDAREKLCEAVDDLK
VNTFVLGCRGLGPLKRALLGSVSNYVVNNATCPVTVVRAPTVSNA

Transcript Sequence

Transcript ID

Os02t0773200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:32643551:32644836:1 gene:Os02g0773200 gene_biotype:protein_coding transcript_biotype:protein_coding description:UspA domain containing protein. (Os02t0773200-01)
Sequence

AGGCGATATGTCACCCTATTTCTGTTGCTGTTCAACGACGTCCTTAAATAGGAGTACTTG
TGCTACAAGCCTAACCCAGAGATAGCACCACAAATACCTCTCTTTTCTTTAGGTGTTTAC
TTCGACAGCTTCACCACCTTCGTTTACCCATTGCCATGGCGGCTGAGAAGCGAACCATTG
GGCTCGGCATGGACTACTCGCCGTCGAGCAAGGCCGCGGCGAAGTGGGCGGTGGATAACC
TGGTGAAGGCCGGCGACCGGATCATCCTCGTCCATGTCCTTCCCAAAGGAGCAGATGCCA
GCCACAAGGAGCTCTGGAAGAGCACCGGCTCACCTTTGATTCCTCTGCTGGAGTTTATGG
AGATGAACGTGCAGGCGAGGTATGGGATCAACCCCGATAAGGAGGTACTGGAGATCCTGC
AAGCTGAATCCAAGTCCAAGCAGGTTGAAGTACTGGCAAAAGTTTACTGGGGTGATGCAA
GGGAGAAACTCTGTGAGGCAGTAGACGATCTCAAGGTGAATACCTTTGTTCTTGGTTGCA
GGGGACTAGGACCCTTGAAAAGGGCCCTACTTGGAAGTGTTAGCAACTATGTTGTCAACA
ATGCAACCTGCCCGGTTACTGTGGTGCGTGCACCAACCGTGTCAAATGCCTGATTCTATG
CTACATGGGACTGCTGGAAATTGGAATGCTGGGCTTGTTTTGCTGTTCATCCATCTTTTA
GCAGAGAACCTTCATCTGAGTTGGTGCCATTGCAAGGATTGGTCTCTGGCTCCTGCACTT
AGCTTTTCCATGCTATTGGAATGTTATTAAGTTGAATCTTCGGTGTATTTCCTTCTGTTA
CTTCCTATGTATAGTTCATTACTACTGTTTAATGGTGAATGTTAAAGATTGCCAATGGTG
TGCTTGCTTT