Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0770000-02
CDS Infomation	cds chromosome:IRGSP-1.0:2:32465058:32468562:-1 gene:Os02g0770000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:20S proteasome beta1 subunit description:Beta 1 subunit of 20S proteasome. (Os02t0770000-01);Beta 1 subunit of 20S proteasome. (Os02t0770000-02)
Sequence	ATGGACGCCTCTCTCATGGGCGCCCCCTCCGCCGCAGCGGGAGACAATCCCACCTCCGGG GAGCACCGGATGGGGACCACCATCGTCGGCGTCTGCTACGACGGCGGCGTCGTCCTCGCC GCCGATTCCAGAACCAGCACCGGAATGTATGTGGCAAACCGTGCGTCGGACAAGATTACT CAGCTAACTGACAATGTGTACATCTGCCGCTCTGGATCTGCTGCTGATACACAAGTAATT TCCGATTATGTACGCTATTTTCTCCACCAACACACAATTCAGCTTGGGCAGCCAGCTACC GTGAAAGTTGCAGCCAACTTAATTAGGTTGTTGGCTTATCAGAACAAGAACATGTTGCAA GCTGGCATGATTGTTGGTGGATGGGATAAATATGAGGGAGGCCAAATTTTCTCAGTCCCC CTTGGTGGAACAATTCTGAGGCAACCATTTGCAATCGGAGGTTCAGGCTCTAGTTACCTC TATGGATTGCTTGACCACGAATGGAAGGAGGGCATGTCCCAGGAAGAAGCTGAGAAGTTT GTGGTTAAGGTAGTTTCCCTTGCTATAGCCCGTGATGGTGCTAGTGGAGGGGTTGTTCGT ACCGTCACTATAAACGCAGATGGTGTTTCGAGGAAATTTCACCCTGGAGACAAACTACAA CTGTGGCATGAAGAGCTGGAGCCCCAGAACTCGTTGCTGGACATACTTGCAGCTGGGAAC CCTGATCCGATGGTCCAATGA

Peptide Sequence

PEP ID	Os02t0770000-02
PEP Infomation	pep chromosome:IRGSP-1.0:2:32465058:32468562:-1 gene:Os02g0770000 transcript:Os02t0770000-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:20S proteasome beta1 subunit description:Beta 1 subunit of 20S proteasome. (Os02t0770000-01);Beta 1 subunit of 20S proteasome. (Os02t0770000-02)
Sequence	MDASLMGAPSAAAGDNPTSGEHRMGTTIVGVCYDGGVVLAADSRTSTGMYVANRASDKIT QLTDNVYICRSGSAADTQVISDYVRYFLHQHTIQLGQPATVKVAANLIRLLAYQNKNMLQ AGMIVGGWDKYEGGQIFSVPLGGTILRQPFAIGGSGSSYLYGLLDHEWKEGMSQEEAEKF VVKVVSLAIARDGASGGVVRTVTINADGVSRKFHPGDKLQLWHEELEPQNSLLDILAAGN PDPMVQ

Transcript Sequence

Transcript ID	Os02t0770000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:32465058:32468562:-1 gene:Os02g0770000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:20S proteasome beta1 subunit description:Beta 1 subunit of 20S proteasome. (Os02t0770000-01);Beta 1 subunit of 20S proteasome. (Os02t0770000-02)
Sequence	CTGGTCTCTTCTCGCTCGCGCGACTGAAAGGAGCGCCTCGACTCGCATCTCGCCGCCGCG CAGCTAAGCTAGGGTTTTCCGCCACCGCCGATCTCGCCCCCGCCCCCGGCCAGCCATGGA CGCCTCTCTCATGGGCGCCCCCTCCGCCGCAGCGGGAGACAATCCCACCTCCGGGGAGCA CCGGATGGGGACCACCATCGTCGGCGTCTGCTACGACGGCGGCGTCGTCCTCGCCGCCGA TTCCAGAACCAGCACCGGAATGTATGTGGCAAACCGTGCGTCGGACAAGATTACTCAGCT AACTGACAATGTGTACATCTGCCGCTCTGGATCTGCTGCTGATACACAAGTAATTTCCGA TTATGTACGCTATTTTCTCCACCAACACACAATTCAGCTTGGGCAGCCAGCTACCGTGAA AGTTGCAGCCAACTTAATTAGGTTGTTGGCTTATCAGAACAAGAACATGTTGCAAGCTGG CATGATTGTTGGTGGATGGGATAAATATGAGGGAGGCCAAATTTTCTCAGTCCCCCTTGG TGGAACAATTCTGAGGCAACCATTTGCAATCGGAGGTTCAGGCTCTAGTTACCTCTATGG ATTGCTTGACCACGAATGGAAGGAGGGCATGTCCCAGGAAGAAGCTGAGAAGTTTGTGGT TAAGGTAGTTTCCCTTGCTATAGCCCGTGATGGTGCTAGTGGAGGGGTTGTTCGTACCGT CACTATAAACGCAGATGGTGTTTCGAGGAAATTTCACCCTGGAGACAAACTACAACTGTG GCATGAAGAGCTGGAGCCCCAGAACTCGTTGCTGGACATACTTGCAGCTGGGAACCCTGA TCCGATGGTCCAATGAATCTGCCCTCCAGCCATACACCTCCCTTAAGCAACTTTCTTCTG TATCTGACTTTCACTAGATTTACTGAAGAACTGGACTGCAGAATTATGTTCAGCTGTGCG CAATTATCTAGTGCAAGATGCTTCTTGTGCTGTATGTAATTTCTTTTCGTTAAGGAAGTT CAAAAATATCATTTAGACTT