Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0769900-03
CDS Infomation	cds chromosome:IRGSP-1.0:2:32462828:32464562:-1 gene:Os02g0769900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os02t0769900-01);Pentatricopeptide repeat domain containing protein. (Os02t0769900-02);Pentatricopeptide repeat domain containing protein. (Os02t0769900-03)
Sequence	ATGCTCTCCTCCCCCGCGGCGCCCGTCCCCAACGACGTCACCCTTCTCACCGTCCTCTCC GCCTGCGCCGACTCCCCGTCCTCCCCGCTCGCCCGCCGCCTCGCGCTCTCCGTCCACGCC CGCGTGCTCAAGCTCTTCCCCTCCCACCTCCTCCTCTCCACCTGCCTCGTGCGCTTCTAC TTCGCGTCCCGCTTGCCCCACCTCGCCCTCCAGCTGTTCGACGCCATGCCCGTGAGGTCC GCCGTCACCTACAACACGGTGATCTCCGGCCTCATGCGGAACGGCCTCGTCGCCGCCGCG TTCGAGGTGTTCGACGGAATGCCGGCGCCGGATAAGGTCTCCTGGACGGCTCTCATCGAC GGGTGCGTCAAGAACGGGCGCCACGACGAGGCCATCGACTGCTTCCGCGCCATGCTTCTG GACGGTGTCGAGCCGGACTACGTCACGCTGATAGCCGTCATCTCCGCGTGCGCCGAGGTC GGCGCGCTGGGGCTCGGGATGTGGGTGCACCGGCTCGTGGTCCGGCAGGGGCTGGAGCGC AACGTCAGGATAGCCAACTCGCTCATCGACATGTACGCGCGGTGCGGGCAGGTGGAGCTC GCGCGGCAGGTGTTCAGCGGAATGAGGAAGCGGACGGTGGTCTCCTGGAACTCGATGATC GTTGGGTTCGCCGCCAACGGCCGGTGCGCGGACGCCGTCGAGCACTTCGAGGCGATGCGG AGGGAGGGGTTCAAGCCGGACGCCGTGACGTTCACCGGCGTGCTCACGGCGTGCAGCCAC GGCGGCCTCACCGACGAGGGGCTAAGATACTACGACCTGATGAGGGCGGAGTACGGCATC GCGGCGCGGATGGAGCACTACGGCTGCGTGGTCGACCTGCTCGGCCGGTCGGGGCAGCTC GAGGAGGCGATGCGGGTGGTGACCACCATGCCGATGCGGCCAAACGAGGTGGTGCTCGGC GCCCTCCTCGCCGGCTGCCGGATGCACGGGGACGTCGGCATGGCCGAGCAGCTGATGCAG CACCTGCTCGAGCTGGACCCCGGCGGCGACGCCAACTACGTGCTGCTGTCGAACATCTAC GCCGCCGTCGGCAAGTGGGACGGCGCCGGGAAGGTCCGGAGCCTGATGAAGGCGCGGGGG CTGAGGAAGAGGCCGGGCTACAGCGCCGTGGAGATCGACGGCGACGTGCACGAGTTCGTC TCCGGCGATCGGTCGCATCCACAGGCGGAGGAGATATCTCAGATGCTTGGGTTGCTCATG CATGAGATGGCAGGGCATGATTATGACCATGTAATCGATTGCTTGGATGGGGGATGA

Peptide Sequence

PEP ID	Os02t0769900-03
PEP Infomation	pep chromosome:IRGSP-1.0:2:32462828:32464562:-1 gene:Os02g0769900 transcript:Os02t0769900-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os02t0769900-01);Pentatricopeptide repeat domain containing protein. (Os02t0769900-02);Pentatricopeptide repeat domain containing protein. (Os02t0769900-03)
Sequence	MLSSPAAPVPNDVTLLTVLSACADSPSSPLARRLALSVHARVLKLFPSHLLLSTCLVRFY FASRLPHLALQLFDAMPVRSAVTYNTVISGLMRNGLVAAAFEVFDGMPAPDKVSWTALID GCVKNGRHDEAIDCFRAMLLDGVEPDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLER NVRIANSLIDMYARCGQVELARQVFSGMRKRTVVSWNSMIVGFAANGRCADAVEHFEAMR REGFKPDAVTFTGVLTACSHGGLTDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGQL EEAMRVVTTMPMRPNEVVLGALLAGCRMHGDVGMAEQLMQHLLELDPGGDANYVLLSNIY AAVGKWDGAGKVRSLMKARGLRKRPGYSAVEIDGDVHEFVSGDRSHPQAEEISQMLGLLM HEMAGHDYDHVIDCLDGG

Transcript Sequence

Transcript ID	Os02t0769900-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:32462828:32464562:-1 gene:Os02g0769900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os02t0769900-01);Pentatricopeptide repeat domain containing protein. (Os02t0769900-02);Pentatricopeptide repeat domain containing protein. (Os02t0769900-03)
Sequence	GGGGAGAGCAAAGGCTCCGTGCCAACGTGCCCGCGGGGAAATGCCTCAGCCCTCAGCCAT AGACCTTACCTCATGGCCGTCGTAGCCCCTCCTTCCCTTGCCCTTCCCCAACCTCCTCAG AACCCAACCCCTAAACCTCGCCGCTGCGCTCTCCGCCATGCTCTCCTCCCCCGCGGCGCC CGTCCCCAACGACGTCACCCTTCTCACCGTCCTCTCCGCCTGCGCCGACTCCCCGTCCTC CCCGCTCGCCCGCCGCCTCGCGCTCTCCGTCCACGCCCGCGTGCTCAAGCTCTTCCCCTC CCACCTCCTCCTCTCCACCTGCCTCGTGCGCTTCTACTTCGCGTCCCGCTTGCCCCACCT CGCCCTCCAGCTGTTCGACGCCATGCCCGTGAGGTCCGCCGTCACCTACAACACGGTGAT CTCCGGCCTCATGCGGAACGGCCTCGTCGCCGCCGCGTTCGAGGTGTTCGACGGAATGCC GGCGCCGGATAAGGTCTCCTGGACGGCTCTCATCGACGGGTGCGTCAAGAACGGGCGCCA CGACGAGGCCATCGACTGCTTCCGCGCCATGCTTCTGGACGGTGTCGAGCCGGACTACGT CACGCTGATAGCCGTCATCTCCGCGTGCGCCGAGGTCGGCGCGCTGGGGCTCGGGATGTG GGTGCACCGGCTCGTGGTCCGGCAGGGGCTGGAGCGCAACGTCAGGATAGCCAACTCGCT CATCGACATGTACGCGCGGTGCGGGCAGGTGGAGCTCGCGCGGCAGGTGTTCAGCGGAAT GAGGAAGCGGACGGTGGTCTCCTGGAACTCGATGATCGTTGGGTTCGCCGCCAACGGCCG GTGCGCGGACGCCGTCGAGCACTTCGAGGCGATGCGGAGGGAGGGGTTCAAGCCGGACGC CGTGACGTTCACCGGCGTGCTCACGGCGTGCAGCCACGGCGGCCTCACCGACGAGGGGCT AAGATACTACGACCTGATGAGGGCGGAGTACGGCATCGCGGCGCGGATGGAGCACTACGG CTGCGTGGTCGACCTGCTCGGCCGGTCGGGGCAGCTCGAGGAGGCGATGCGGGTGGTGAC CACCATGCCGATGCGGCCAAACGAGGTGGTGCTCGGCGCCCTCCTCGCCGGCTGCCGGAT GCACGGGGACGTCGGCATGGCCGAGCAGCTGATGCAGCACCTGCTCGAGCTGGACCCCGG CGGCGACGCCAACTACGTGCTGCTGTCGAACATCTACGCCGCCGTCGGCAAGTGGGACGG CGCCGGGAAGGTCCGGAGCCTGATGAAGGCGCGGGGGCTGAGGAAGAGGCCGGGCTACAG CGCCGTGGAGATCGACGGCGACGTGCACGAGTTCGTCTCCGGCGATCGGTCGCATCCACA GGCGGAGGAGATATCTCAGATGCTTGGGTTGCTCATGCATGAGATGGCAGGGCATGATTA TGACCATGTAATCGATTGCTTGGATGGGGGATGAATTCAGACCCTGGAGACTGGAGAATG CAGAAGACTGATATTCTGAAGTCAAAAGATAGCCGACGTTAGATTAGAGAACTGTTGTAT ATCAGTAGTTCAGTACATTTAGCTGTCCTGCCACTATGATTCCCCCTCATCTGTGTAGTC ACAGGAGTGAAGTCCAACATGAATTGAATTATCGC