Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0765600-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:32248329:32250174:-1 gene:Os02g0765600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALPHA-AMYLASE 1A description:Alpha-amylase glycoprotein, Degradation of starch granule (Os02t0765600-01)
Sequence	ATGCAGGTGCTGAACACCATGGTGAACAAACACTTCTTGTCCCTTTCGGTCCTCATCGTC CTCCTTGGCCTCTCCTCCAACTTGACAGCCGGGCAAGTCCTGTTTCAGGGATTCAACTGG GAGTCGTGGAAGGAGAATGGCGGGTGGTACAACTTCCTGATGGGCAAGGTGGACGACATC GCCGCAGCCGGCATCACCCACGTCTGGCTCCCTCCGCCGTCTCACTCTGTCGGCGAGCAA GGCTACATGCCTGGGCGGCTGTACGATCTGGACGCGTCTAAGTACGGCAACGAGGCGCAG CTCAAGTCGCTGATCGAGGCGTTCCATGGCAAGGGCGTCCAGGTGATCGCCGACATCGTC ATCAACCACCGCACGGCGGAGCACAAGGACGGCCGCGGCATCTACTGCCTCTTCGAGGGC GGGACGCCCGACTCCCGCCTCGACTGGGGCCCGCACATGATCTGCCGCGACGACCCCTAC GGCGATGGCACCGGCAACCCGGACACCGGCGCCGACTTCGCCGCCGCGCCGGACATCGAC CACCTCAACAAGCGCGTCCAGCGGGAGCTCATTGGCTGGCTCGACTGGCTCAAGATGGAC ATCGGCTTCGACGCGTGGCGCCTCGACTTCGCCAAGGGCTACTCCGCCGACATGGCAAAG ATCTACATCGACGCCACCGAGCCGAGCTTCGCCGTGGCCGAGATATGGACGTCCATGGCG AACGGCGGGGACGGCAAGCCGAACTACGACCAGAACGCGCACCGGCAGGAGCTGGTCAAC TGGGTCGATCGTGTCGGCGGCGCCAACAGCAACGCCACGGCGTTCGACTTCACCACCAAG GGCATCCTCAACGTCGCCGTGGAGGGCGAGCTGTGGCGCCTCCGCGGCGAGGACGGCAAG GCGCCCGGCATGATCGGGTGGTGGCCGGCCAAGGCGACGACCTTCGTCGACAACCACGAC ACCGGCTCGACGCAGCACCTGTGGCCGTTCCCCTCCGACAAGGTCATGCAGGGCTACGCA TACATCCTCACCCACCCCGGCAACCCATGCATCTTCTACGACCATTTCTTCGATTGGGGT CTCAAGGAGGAGATCGAGCGCCTGGTGTCAATCAGAAACCGGCAGGGGATCCACCCGGCG AGCGAGCTGCGCATCATGGAAGCTGACAGCGATCTCTACCTCGCGGAGATCGATGGCAAG GTGATCACAAAGATTGGACCAAGATACGACGTCGAACACCTCATCCCCGAAGGCTTCCAG GTCGTCGCGCACGGTGATGGCTACGCAATCTGGGAGAAAATCTGA

Peptide Sequence

PEP ID	Os02t0765600-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:32248329:32250174:-1 gene:Os02g0765600 transcript:Os02t0765600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALPHA-AMYLASE 1A description:Alpha-amylase glycoprotein, Degradation of starch granule (Os02t0765600-01)
Sequence	MQVLNTMVNKHFLSLSVLIVLLGLSSNLTAGQVLFQGFNWESWKENGGWYNFLMGKVDDI AAAGITHVWLPPPSHSVGEQGYMPGRLYDLDASKYGNEAQLKSLIEAFHGKGVQVIADIV INHRTAEHKDGRGIYCLFEGGTPDSRLDWGPHMICRDDPYGDGTGNPDTGADFAAAPDID HLNKRVQRELIGWLDWLKMDIGFDAWRLDFAKGYSADMAKIYIDATEPSFAVAEIWTSMA NGGDGKPNYDQNAHRQELVNWVDRVGGANSNATAFDFTTKGILNVAVEGELWRLRGEDGK APGMIGWWPAKATTFVDNHDTGSTQHLWPFPSDKVMQGYAYILTHPGNPCIFYDHFFDWG LKEEIERLVSIRNRQGIHPASELRIMEADSDLYLAEIDGKVITKIGPRYDVEHLIPEGFQ VVAHGDGYAIWEKI

Transcript Sequence

Transcript ID	Os02t0765600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:32248329:32250174:-1 gene:Os02g0765600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALPHA-AMYLASE 1A description:Alpha-amylase glycoprotein, Degradation of starch granule (Os02t0765600-01)
Sequence	AATCATCCATCTCCGAAGTGTGTCTGCAGCATGCAGGTGCTGAACACCATGGTGAACAAA CACTTCTTGTCCCTTTCGGTCCTCATCGTCCTCCTTGGCCTCTCCTCCAACTTGACAGCC GGGCAAGTCCTGTTTCAGGGATTCAACTGGGAGTCGTGGAAGGAGAATGGCGGGTGGTAC AACTTCCTGATGGGCAAGGTGGACGACATCGCCGCAGCCGGCATCACCCACGTCTGGCTC CCTCCGCCGTCTCACTCTGTCGGCGAGCAAGGCTACATGCCTGGGCGGCTGTACGATCTG GACGCGTCTAAGTACGGCAACGAGGCGCAGCTCAAGTCGCTGATCGAGGCGTTCCATGGC AAGGGCGTCCAGGTGATCGCCGACATCGTCATCAACCACCGCACGGCGGAGCACAAGGAC GGCCGCGGCATCTACTGCCTCTTCGAGGGCGGGACGCCCGACTCCCGCCTCGACTGGGGC CCGCACATGATCTGCCGCGACGACCCCTACGGCGATGGCACCGGCAACCCGGACACCGGC GCCGACTTCGCCGCCGCGCCGGACATCGACCACCTCAACAAGCGCGTCCAGCGGGAGCTC ATTGGCTGGCTCGACTGGCTCAAGATGGACATCGGCTTCGACGCGTGGCGCCTCGACTTC GCCAAGGGCTACTCCGCCGACATGGCAAAGATCTACATCGACGCCACCGAGCCGAGCTTC GCCGTGGCCGAGATATGGACGTCCATGGCGAACGGCGGGGACGGCAAGCCGAACTACGAC CAGAACGCGCACCGGCAGGAGCTGGTCAACTGGGTCGATCGTGTCGGCGGCGCCAACAGC AACGCCACGGCGTTCGACTTCACCACCAAGGGCATCCTCAACGTCGCCGTGGAGGGCGAG CTGTGGCGCCTCCGCGGCGAGGACGGCAAGGCGCCCGGCATGATCGGGTGGTGGCCGGCC AAGGCGACGACCTTCGTCGACAACCACGACACCGGCTCGACGCAGCACCTGTGGCCGTTC CCCTCCGACAAGGTCATGCAGGGCTACGCATACATCCTCACCCACCCCGGCAACCCATGC ATCTTCTACGACCATTTCTTCGATTGGGGTCTCAAGGAGGAGATCGAGCGCCTGGTGTCA ATCAGAAACCGGCAGGGGATCCACCCGGCGAGCGAGCTGCGCATCATGGAAGCTGACAGC GATCTCTACCTCGCGGAGATCGATGGCAAGGTGATCACAAAGATTGGACCAAGATACGAC GTCGAACACCTCATCCCCGAAGGCTTCCAGGTCGTCGCGCACGGTGATGGCTACGCAATC TGGGAGAAAATCTGAGCGCACGATGACGAGACTCTCAGTTTAGCAGATTTAACCTGCGAT TTTTACCCTGACCGGTATACGTATATACGTGCCGGCAACGAGCTGTATCCGATCCGAATT ACGGATGCAATTGTCCACGAAGTACTTCCTCCGTAAATAAAGTGAGGATCAGGGACATAC ATTTGTATGGTTTTACGAATAATGCTATGCAATAAAATTTGCACTGCTTAATGCTTATGC