Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0765400-00
CDS Infomation	cds chromosome:IRGSP-1.0:2:32243175:32245008:1 gene:Os02g0765400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:alpha-amylase 10-C description:Similar to Alpha-amylase. (Os02t0765400-00)
Sequence	CTGCAGCCTGCACGTACTGTACTGAGGACAATGGCGAGCAAACGCTTCTTGTCCCTGTCC CTGCTCATCCTCCTCCTCGGCTTCTCCTCCAGCTTGGCAGCCGGGCAAGTCCTGTTTCAG GGCTTCAACTGGGAGTCGTGGAAGGAGAATGGCGGGTGGTACAACATGCTGATGGGCAAG GTGGACGACATCGCCGCCGCCGGCATCACCCACGTCTGGCTCCCTCCGCCGTCTCAATCT GTCGCCGAACAAGGCTACATGCCGGGGCGGCTGTACGATCTGGACGCTTCCAAGTACGGC AACGAGGCGCAGCTCAAGTCGCTGATCGAGGCGTTCCACGGCAAGGGCGTCCAGGTGATC GCCGACATCGTCATCAACCACCGCACGGCGGAGCACAAGGACGGCCGCGGCATCTACTGC CTCTTCGAGGGCGGGACGCCCGACTCCCGCCTCGACTGGGGCCCGCACATGATCTGCCGC GGCGACCCCTACGGCGACGGCACCGGCAACCCGGACACCGGCGCCGACTTCGGCGCCGCG CCTGACATCGACCACCTCAACAAGCGCGTCCAGCGCGAGCTCATCGGCTGGCTCGACTGG CTCAAGATGGACATCGGCTTCGACGCGTGGCGCCTCGACTTCGCCAAGGGCTACTCCGCC GACGTGGCAAAGATCTACATCGACGCCACCGAGCCGAGCTTCGCCGTGGCCGAGATATGG ACGTCGCTGGCGTACGGCGGGGACGGCAAGCCGGACTATGACCAGAACGCGCACCGGCAG GAGCTGGTCAACTGGGTCGACCGCGTCGGCGGCGCCAACAGCAACGCCACGACGTTCGAC TTCACCACCAAGGGCATCCTCAACGTCGCCGTGGAGGGCGAGCTATGGCGCCTCCGCGGC GAGGACGGCAAGGCGCCCGGCATGATCGGGTGGTGGCCGGCTAAGGCGACGACCTTCATC GACAACCATGACACCGGCTCGACGCAGCACATGTGGCCGTTCCCCTCCGACAAGGTCATG CAGGGCTACGCCTACATCCTCACCCACCCCGGCAACCCATGCATCTTCTACGACCATTTC TTCGACTGGGGCCACAAGGAGGAGATCGAGCGCCTGGTATCGATCAGAAACCGGCAGGGG ATCCACCCGGCGAGCGAGCTGCGTATCATGGAGGCTGACAGCGATCTCTACCTCGCCGAG ATCGACGGAAAGGTCATCACGAAGGTCGGACCAAGATACGACGTCGAGCACCTCATCCCC GAAGGCTTCCAGGTCGTCGCGCACGGTGACGGCTACGCAGTCTGGGAGAAAATCTGA

Peptide Sequence

PEP ID	Os02t0765400-00
PEP Infomation	pep chromosome:IRGSP-1.0:2:32243175:32245008:1 gene:Os02g0765400 transcript:Os02t0765400-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:alpha-amylase 10-C description:Similar to Alpha-amylase. (Os02t0765400-00)
Sequence	LQPARTVLRTMASKRFLSLSLLILLLGFSSSLAAGQVLFQGFNWESWKENGGWYNMLMGK VDDIAAAGITHVWLPPPSQSVAEQGYMPGRLYDLDASKYGNEAQLKSLIEAFHGKGVQVI ADIVINHRTAEHKDGRGIYCLFEGGTPDSRLDWGPHMICRGDPYGDGTGNPDTGADFGAA PDIDHLNKRVQRELIGWLDWLKMDIGFDAWRLDFAKGYSADVAKIYIDATEPSFAVAEIW TSLAYGGDGKPDYDQNAHRQELVNWVDRVGGANSNATTFDFTTKGILNVAVEGELWRLRG EDGKAPGMIGWWPAKATTFIDNHDTGSTQHMWPFPSDKVMQGYAYILTHPGNPCIFYDHF FDWGHKEEIERLVSIRNRQGIHPASELRIMEADSDLYLAEIDGKVITKVGPRYDVEHLIP EGFQVVAHGDGYAVWEKI

Transcript Sequence

Transcript ID	Os02t0765400-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:32243175:32245008:1 gene:Os02g0765400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:alpha-amylase 10-C description:Similar to Alpha-amylase. (Os02t0765400-00)
Sequence	AGTATAGCTGCAGCCTGCACGTACTGTACTGAGGACAATGGCGAGCAAACGCTTCTTGTC CCTGTCCCTGCTCATCCTCCTCCTCGGCTTCTCCTCCAGCTTGGCAGCCGGGCAAGTCCT GTTTCAGGGCTTCAACTGGGAGTCGTGGAAGGAGAATGGCGGGTGGTACAACATGCTGAT GGGCAAGGTGGACGACATCGCCGCCGCCGGCATCACCCACGTCTGGCTCCCTCCGCCGTC TCAATCTGTCGCCGAACAAGGCTACATGCCGGGGCGGCTGTACGATCTGGACGCTTCCAA GTACGGCAACGAGGCGCAGCTCAAGTCGCTGATCGAGGCGTTCCACGGCAAGGGCGTCCA GGTGATCGCCGACATCGTCATCAACCACCGCACGGCGGAGCACAAGGACGGCCGCGGCAT CTACTGCCTCTTCGAGGGCGGGACGCCCGACTCCCGCCTCGACTGGGGCCCGCACATGAT CTGCCGCGGCGACCCCTACGGCGACGGCACCGGCAACCCGGACACCGGCGCCGACTTCGG CGCCGCGCCTGACATCGACCACCTCAACAAGCGCGTCCAGCGCGAGCTCATCGGCTGGCT CGACTGGCTCAAGATGGACATCGGCTTCGACGCGTGGCGCCTCGACTTCGCCAAGGGCTA CTCCGCCGACGTGGCAAAGATCTACATCGACGCCACCGAGCCGAGCTTCGCCGTGGCCGA GATATGGACGTCGCTGGCGTACGGCGGGGACGGCAAGCCGGACTATGACCAGAACGCGCA CCGGCAGGAGCTGGTCAACTGGGTCGACCGCGTCGGCGGCGCCAACAGCAACGCCACGAC GTTCGACTTCACCACCAAGGGCATCCTCAACGTCGCCGTGGAGGGCGAGCTATGGCGCCT CCGCGGCGAGGACGGCAAGGCGCCCGGCATGATCGGGTGGTGGCCGGCTAAGGCGACGAC CTTCATCGACAACCATGACACCGGCTCGACGCAGCACATGTGGCCGTTCCCCTCCGACAA GGTCATGCAGGGCTACGCCTACATCCTCACCCACCCCGGCAACCCATGCATCTTCTACGA CCATTTCTTCGACTGGGGCCACAAGGAGGAGATCGAGCGCCTGGTATCGATCAGAAACCG GCAGGGGATCCACCCGGCGAGCGAGCTGCGTATCATGGAGGCTGACAGCGATCTCTACCT CGCCGAGATCGACGGAAAGGTCATCACGAAGGTCGGACCAAGATACGACGTCGAGCACCT CATCCCCGAAGGCTTCCAGGTCGTCGCGCACGGTGACGGCTACGCAGTCTGGGAGAAAAT CTGAGCGGTGGAGAGGCACAATTAGCAGATTTTATTTACCTGCAATTTTTTCCACCCTCG ACGTATAACATATACATGTGATGGCAACGAGTTGTATGCTGTATCTGATCTGAACTATGT ACGCGATTGTCCACAAAGTACTACCTCCGTAAATAAAGTGAGGATATGGAACATGCGTTT GCATGCATGGTTTTACAAATAATGGTATGCAATAAAATTTTCACTGCTTATGCA