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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0762400-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:32111311:32112948:1 gene:Os02g0762400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:KIP-RELATED PROTEIN 1 description:CDK inhibitor (CKI), Seed development (Os02t0762400-01)
Sequence

ATGGGCAAGTACATGAGGAAGTTCAGGGGGGCCACGGGGGAGGAGTTGGCCGCCATGGAG
GTCACGCAGGTGGTTGGCGTCCGGACGAGGTCGAGGTCGGCAGCGGCGGCGGGCGCGACG
ACGACGAAGGTGAAGGCGGCGTCGGCGGCGTCCACCAGGAGGAGGAAGGCGCTGCTGCCG
ACGGCGGTCGTGGGGACTACTCGCCGTGACGGCGGGAGCTGCTACCTCCAGCTGAGGAGC
CGCATGCTGTTCATGGCCCCGCCGAGGCCGGCGCCGGCCGCGAGGGCTCCGGTTGTAGCG
GAGGCGGCGGGTTCCGGGAACGGAGCGGCGGCGCATGCGGCGGCTGGCCTCTCGCGTTGC
TCCAGCACGGCGTCGTCCGTGGACGCGGCGGCTCAGGACAGGAGCCTCGCGTGCCGCTCC
GACGTCGCGGAGGCAGGCAGCGAGCATGTCCCGGAGGGCTCCGCGAGCGACTCGGCGAGC
GGCCGTGACCGCGAGAGGAGAGAAACAACTCCATCAAGCTTTCTCCCCGGAGAGGTGAGC
GATCTGGAGTCGGATCTGGCTGGAGGACAGAAGCGCAGCCGTCCACTACCTTCTGCGGCA
ACAGCCTCAGCACAGCAAGCCACGCGGCCGAAGATTCCGCCGGCCGCCGAGATCGAGGCG
TTCTTCGCGGCGGCCGAGGAGGCTGAGGCCAAGCGCTTCGCCGCCAAGTACAACTTCGAC
GTCGTTCGCGGCGTGCCCCTCGACGCCGGTCGGTTCGAGTGGACTCCGGTGGTCAGCAGC
CGAAGCTGA

Peptide Sequence

PEP ID

Os02t0762400-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:32111311:32112948:1 gene:Os02g0762400 transcript:Os02t0762400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:KIP-RELATED PROTEIN 1 description:CDK inhibitor (CKI), Seed development (Os02t0762400-01)
Sequence

MGKYMRKFRGATGEELAAMEVTQVVGVRTRSRSAAAAGATTTKVKAASAASTRRRKALLP
TAVVGTTRRDGGSCYLQLRSRMLFMAPPRPAPAARAPVVAEAAGSGNGAAAHAAAGLSRC
SSTASSVDAAAQDRSLACRSDVAEAGSEHVPEGSASDSASGRDRERRETTPSSFLPGEVS
DLESDLAGGQKRSRPLPSAATASAQQATRPKIPPAAEIEAFFAAAEEAEAKRFAAKYNFD
VVRGVPLDAGRFEWTPVVSSRS

Transcript Sequence

Transcript ID

Os02t0762400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:32111311:32112948:1 gene:Os02g0762400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:KIP-RELATED PROTEIN 1 description:CDK inhibitor (CKI), Seed development (Os02t0762400-01)
Sequence

AGGGAAACGGCCAAAGAAGGCGACGGCGGCGGCGCAGGAGGGGCGCGCACGCGGCGCAGA
TGGGCAAGTACATGAGGAAGTTCAGGGGGGCCACGGGGGAGGAGTTGGCCGCCATGGAGG
TCACGCAGGTGGTTGGCGTCCGGACGAGGTCGAGGTCGGCAGCGGCGGCGGGCGCGACGA
CGACGAAGGTGAAGGCGGCGTCGGCGGCGTCCACCAGGAGGAGGAAGGCGCTGCTGCCGA
CGGCGGTCGTGGGGACTACTCGCCGTGACGGCGGGAGCTGCTACCTCCAGCTGAGGAGCC
GCATGCTGTTCATGGCCCCGCCGAGGCCGGCGCCGGCCGCGAGGGCTCCGGTTGTAGCGG
AGGCGGCGGGTTCCGGGAACGGAGCGGCGGCGCATGCGGCGGCTGGCCTCTCGCGTTGCT
CCAGCACGGCGTCGTCCGTGGACGCGGCGGCTCAGGACAGGAGCCTCGCGTGCCGCTCCG
ACGTCGCGGAGGCAGGCAGCGAGCATGTCCCGGAGGGCTCCGCGAGCGACTCGGCGAGCG
GCCGTGACCGCGAGAGGAGAGAAACAACTCCATCAAGCTTTCTCCCCGGAGAGGTGAGCG
ATCTGGAGTCGGATCTGGCTGGAGGACAGAAGCGCAGCCGTCCACTACCTTCTGCGGCAA
CAGCCTCAGCACAGCAAGCCACGCGGCCGAAGATTCCGCCGGCCGCCGAGATCGAGGCGT
TCTTCGCGGCGGCCGAGGAGGCTGAGGCCAAGCGCTTCGCCGCCAAGTACAACTTCGACG
TCGTTCGCGGCGTGCCCCTCGACGCCGGTCGGTTCGAGTGGACTCCGGTGGTCAGCAGCC
GAAGCTGAAGCGAGCGTGCAGATTAAGCGGAAGCTAGAAAGGAAGGTACAGGGGGGCGCC
GTGTAGAAAGGGAAGGCGAGCTAGAGAGAGGAGAAGAAGAAGAAGAAAAGATGCTCATCC
AAAGGGAATAAACTGGAAAAGTGGGAGACTACAAAAAAAGAAGCATTATAGCCTAACAAC
CACCGATTCGACTCTTTTTTCTTTCACATTTTCTTTGCATTTTTACTCTTACTGTGTACT
AGAAAGTAGTAGCAGTAGTAAACTAGTAATTCGTCCCAGTATTTATCAGAGGTTTATCTC
GATAGGAATAGATATATTATCCCCTTACTGTAATTGCCTCCATCTTGTATTTGGATGGAA
ATTAAATTTACTGTACAGCAGCAGCAGCTGTTCTGCAAGTTTAAGTTAACCATCACCGTT
TTATT