Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0761200-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:32052568:32055886:-1 gene:Os02g0761200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-like helical domain containing protein. (Os02t0761200-01)
Sequence

ATGGCGATCGCGATCTCTCAGGAGGCGTTCGACGCCATGGTGCGGGAGAACATGGAGGAC
CTCGGCATGGACGCCGACGAGGCCCTCGCCGACGCCGTCGACGCCCTCACCCTCCAAGGT
GCCGACCTCTCCGGGATCATCAAGCGCGTGCCTGGAGAGGCCGCCGCGGCGGAGGTGAGC
CCGGTGATGCGGGTGCTGGACGAGGTGAAGGCCTCTTCTGCCAGTGACAGTGACAGTGGC
GGCAGGTCCGAGGAGGATGCTGAGAGGTTGGCCTCTTTGCTCGACGAGTTGCGCGAGCTG
TGCTCCGGCGATGGGTTGGAGAATGCGGCGGTCGCTGCTCGGAATGGCGGCGTGGAGGCG
CTCGTCGCCCTGTGCGCGTCGGCTGGGGTTAAGCAGGAGAGACTACTTGCCTCGGGCTTG
AAGGCGCTAAGCTCCTTGCTCCGCGATGTTGGAAGCACTGAAAAGTTCAGGCAAAGCGAA
GGGCCCCAAGTTGTCATGGGTATTTTGAAAGGAGGTTCAGAAAGTTCAGATATACTGGAA
GGTGGCTTTAGGGTTGTGGCTTCAGCATCTGCAGGCAATGAAGTTGTTAAAGAGTGCTTT
ATGGTCCTGAAGGTTGATGAACTCATTTTTCAAGTTATGGGGGAGAAATCAAATAGCAAT
GTGCAAAGCTTGTATGATGCCATACGTGTTCTATTGACACCTGATGACAATCGTGTGGTG
GCTTCTCAAGTATATGGATATTCTCGGAGGTTCGCAGAAACTGGGATTGCAGCAGTTCTT
GTCAATGCACTACGTGAGAAAGTTGCCCCTTCCAGCTTACCATCAGCTTGTGCGGCTCTG
AAGGCAATTGCTGTCAATGATGAAATATGCAGATCCATATCTGAAAATGGTGGGATTGAT
GTGCTTCTTCGCTGTATTGATGAGGCTAGTGAACAAAAGAACAAAGTTATAGCAAAATCT
TGCTGCTCTCTGCTGTCCAAGCTGGCTGGAAGTGATGCAAACAAGACTACTATCATTGAA
CGAGGTGGTTTTGATAAGTTCTTGAAGTTGACATCGAGATTTTCTGAAGACCCACCAATA
ATACAAGAGGTAATGTCTATGGTGACTATCCTTACACTGCGGTCACCAGAAAATGCAGCT
CGTGCAATGGGAGCAGGGTATGGCACTTTGGCTATACAGGCAATGCAAAAGTTCCCTTCT
TCTGCTCAAACTCAGAAGCAAGCCTGCCTTATGATCCGTAATCTTGTCGTCAGAAACCCT
GAAAACCGGACGATCTTGCTTAATGATGGTGTGGAGAAGCTTATTAGGAAAACCAAGATG
ATGCACGGGAGCTGCAAAGATGCTGCCACATCTGCCTTGAGGGATCTGGGCGTGGACAAC
TACAATGCATAG

Peptide Sequence

PEP ID

Os02t0761200-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:32052568:32055886:-1 gene:Os02g0761200 transcript:Os02t0761200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-like helical domain containing protein. (Os02t0761200-01)
Sequence

MAIAISQEAFDAMVRENMEDLGMDADEALADAVDALTLQGADLSGIIKRVPGEAAAAEVS
PVMRVLDEVKASSASDSDSGGRSEEDAERLASLLDELRELCSGDGLENAAVAARNGGVEA
LVALCASAGVKQERLLASGLKALSSLLRDVGSTEKFRQSEGPQVVMGILKGGSESSDILE
GGFRVVASASAGNEVVKECFMVLKVDELIFQVMGEKSNSNVQSLYDAIRVLLTPDDNRVV
ASQVYGYSRRFAETGIAAVLVNALREKVAPSSLPSACAALKAIAVNDEICRSISENGGID
VLLRCIDEASEQKNKVIAKSCCSLLSKLAGSDANKTTIIERGGFDKFLKLTSRFSEDPPI
IQEVMSMVTILTLRSPENAARAMGAGYGTLAIQAMQKFPSSAQTQKQACLMIRNLVVRNP
ENRTILLNDGVEKLIRKTKMMHGSCKDAATSALRDLGVDNYNA

Transcript Sequence

Transcript ID

Os02t0761200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:32052568:32055886:-1 gene:Os02g0761200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-like helical domain containing protein. (Os02t0761200-01)
Sequence

ACTCGGCAGCCGGCACCGAAGCCAACAGGCGGAGCAAAAATGGCGATCGCGATCTCTCAG
GAGGCGTTCGACGCCATGGTGCGGGAGAACATGGAGGACCTCGGCATGGACGCCGACGAG
GCCCTCGCCGACGCCGTCGACGCCCTCACCCTCCAAGGTGCCGACCTCTCCGGGATCATC
AAGCGCGTGCCTGGAGAGGCCGCCGCGGCGGAGGTGAGCCCGGTGATGCGGGTGCTGGAC
GAGGTGAAGGCCTCTTCTGCCAGTGACAGTGACAGTGGCGGCAGGTCCGAGGAGGATGCT
GAGAGGTTGGCCTCTTTGCTCGACGAGTTGCGCGAGCTGTGCTCCGGCGATGGGTTGGAG
AATGCGGCGGTCGCTGCTCGGAATGGCGGCGTGGAGGCGCTCGTCGCCCTGTGCGCGTCG
GCTGGGGTTAAGCAGGAGAGACTACTTGCCTCGGGCTTGAAGGCGCTAAGCTCCTTGCTC
CGCGATGTTGGAAGCACTGAAAAGTTCAGGCAAAGCGAAGGGCCCCAAGTTGTCATGGGT
ATTTTGAAAGGAGGTTCAGAAAGTTCAGATATACTGGAAGGTGGCTTTAGGGTTGTGGCT
TCAGCATCTGCAGGCAATGAAGTTGTTAAAGAGTGCTTTATGGTCCTGAAGGTTGATGAA
CTCATTTTTCAAGTTATGGGGGAGAAATCAAATAGCAATGTGCAAAGCTTGTATGATGCC
ATACGTGTTCTATTGACACCTGATGACAATCGTGTGGTGGCTTCTCAAGTATATGGATAT
TCTCGGAGGTTCGCAGAAACTGGGATTGCAGCAGTTCTTGTCAATGCACTACGTGAGAAA
GTTGCCCCTTCCAGCTTACCATCAGCTTGTGCGGCTCTGAAGGCAATTGCTGTCAATGAT
GAAATATGCAGATCCATATCTGAAAATGGTGGGATTGATGTGCTTCTTCGCTGTATTGAT
GAGGCTAGTGAACAAAAGAACAAAGTTATAGCAAAATCTTGCTGCTCTCTGCTGTCCAAG
CTGGCTGGAAGTGATGCAAACAAGACTACTATCATTGAACGAGGTGGTTTTGATAAGTTC
TTGAAGTTGACATCGAGATTTTCTGAAGACCCACCAATAATACAAGAGGTAATGTCTATG
GTGACTATCCTTACACTGCGGTCACCAGAAAATGCAGCTCGTGCAATGGGAGCAGGGTAT
GGCACTTTGGCTATACAGGCAATGCAAAAGTTCCCTTCTTCTGCTCAAACTCAGAAGCAA
GCCTGCCTTATGATCCGTAATCTTGTCGTCAGAAACCCTGAAAACCGGACGATCTTGCTT
AATGATGGTGTGGAGAAGCTTATTAGGAAAACCAAGATGATGCACGGGAGCTGCAAAGAT
GCTGCCACATCTGCCTTGAGGGATCTGGGCGTGGACAACTACAATGCATAGACAGGGAAA
TGAATTTACTGTGCGTAAATTTTGGCAATCTGAGGATGTTTTGGGGGAATTAATGGTGTG
TTTGGGTTGATAGGATTTTGGCTATGCTTGTGCGTGGTCTCAATTTTGTGGAATTAGTGG
TGTGTTGGGTTGCTGCCCCTGCAAACTGCTTCAGCTATGAATTTGTGGAACAATAGTTCA
GTAACACGAGGCGTTGAAAAGAATTGCACG