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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0759900-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:31999250:32001236:1 gene:Os02g0759900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to threonine endopeptidase. (Os02t0759900-01)
Sequence

ATGGAGCTCTTCGTCTCCACCGTCGCCTCCGCGCGCGCCACCGCCCCCTTATGCTTCGCC
TCCTCCTTCCACCACCGCCGCGCTGCTCCTCCCGCCGTCGCCGCCGCCGCCACCCTCCGC
CGCAGCAACCGCCACCTCCCGACTCGAGGATGGCGGTGCGCGAGCGCGGCGGCGCCGGAC
CCGGTGCCATCGGAGGAGCCCGCGTCGGCGTCGGCGTCCACCGTCGTCGTCACGGAGGAC
AAGCCCGATCCGCCGCCGGCGGAGGAGAAGAGCGAGGAGGTCGCGGCGGTCTCTAATGGC
GGGTCTCTGGAGACCGTGGCGGCGGCGCCGGTGTCGTCGGGGGCAGCCGAGGAGGACGGC
GGCTTGGATGACATCCTCAGCAAGCTGGACATCCAAGTGACACCAACTCTTGTCCTCTAT
GGATCCGGTGCTTTGGTTGTCCTATGGGTTCTATCTTCAGTTGTTTCTGCAATCGATTCC
ATTCCCTTGGTTCCAAAAGTTCTTGAACTCATAGGAACTGGTTACTCAATTTGGTTCACT
TCACGGTACCTCCTCTTCAAGGAAAGCAGGGACAAACTGTTTGCGAAATTCGAAGATCTG
AAAGAGAGGATTATTTGA

Peptide Sequence

PEP ID

Os02t0759900-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:31999250:32001236:1 gene:Os02g0759900 transcript:Os02t0759900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to threonine endopeptidase. (Os02t0759900-01)
Sequence

MELFVSTVASARATAPLCFASSFHHRRAAPPAVAAAATLRRSNRHLPTRGWRCASAAAPD
PVPSEEPASASASTVVVTEDKPDPPPAEEKSEEVAAVSNGGSLETVAAAPVSSGAAEEDG
GLDDILSKLDIQVTPTLVLYGSGALVVLWVLSSVVSAIDSIPLVPKVLELIGTGYSIWFT
SRYLLFKESRDKLFAKFEDLKERII

Transcript Sequence

Transcript ID

Os02t0759900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:31999250:32001236:1 gene:Os02g0759900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to threonine endopeptidase. (Os02t0759900-01)
Sequence

CCAGCTCACAAAAACCTCAAACCCCCAGCCTTCTCGGGCCTCCACAGAAAGCCGAGGAAG
AGAAAAAAAAAATGGAGCTCTTCGTCTCCACCGTCGCCTCCGCGCGCGCCACCGCCCCCT
TATGCTTCGCCTCCTCCTTCCACCACCGCCGCGCTGCTCCTCCCGCCGTCGCCGCCGCCG
CCACCCTCCGCCGCAGCAACCGCCACCTCCCGACTCGAGGATGGCGGTGCGCGAGCGCGG
CGGCGCCGGACCCGGTGCCATCGGAGGAGCCCGCGTCGGCGTCGGCGTCCACCGTCGTCG
TCACGGAGGACAAGCCCGATCCGCCGCCGGCGGAGGAGAAGAGCGAGGAGGTCGCGGCGG
TCTCTAATGGCGGGTCTCTGGAGACCGTGGCGGCGGCGCCGGTGTCGTCGGGGGCAGCCG
AGGAGGACGGCGGCTTGGATGACATCCTCAGCAAGCTGGACATCCAAGTGACACCAACTC
TTGTCCTCTATGGATCCGGTGCTTTGGTTGTCCTATGGGTTCTATCTTCAGTTGTTTCTG
CAATCGATTCCATTCCCTTGGTTCCAAAAGTTCTTGAACTCATAGGAACTGGTTACTCAA
TTTGGTTCACTTCACGGTACCTCCTCTTCAAGGAAAGCAGGGACAAACTGTTTGCGAAAT
TCGAAGATCTGAAAGAGAGGATTATTTGAGCTCACGATGAATGATCCTATGGTGTATGTT
AGGCTTCGCAGCCAACTTATTATTAGGTCTTCTTTTTTCTATTACTGAAAGGGAAAAAAG
TTGTGTATGTAAGCCACGTTTCTTTCGCTTCAAATATGATCAGACATCCATAGATTTTTG
TTTGTTAGAGCGGAGCTTGCTCAAGTCTTTCTGGTTTTTTTACCACTTGATCCGATGTAT
ATACTCCATACTGAAAGTGCCGCCAACTGTGAAGCTGTGTACCTTGGATACATAATAATA
TATCAAATGGGTCGACCTTCATATTTGGT