Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0755200-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:31773356:31776401:-1 gene:Os02g0755200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SWIRM domain-containing protein HDMA702, histone lysine-specific demethylase 702, polyamine oxidase 8 description:Similar to amine oxidase family protein. (Os02t0755200-01)
Sequence	ATGGAGGAAGGCAGCGAGGCGCAGCCGCCGCTCCAGCCGGAGGCCGTATCAGCCGAAGCC TCGGAGCCGCCGCCTCCTGTCCCAATGGACCAAGACGAGGGCCAGGCGGCAGCTGCGGAG GCCATGGAGGGGGAAGCTGAAGGCGCTGCGGCGGCCGCGGGGACCATTGAGGGCGAAGCG GGATATGCCGCGGCGGATGCTGATCCCATGGAGGATGAAGCGGCGGACGAAGCCGGCGCC GCTGAGCCCATGGAGGACGACCCGCCGACGTCGTCCGCGCCGTCCGCCACCGCGGCCGTT GACGACTCGACCATCGCGCGGAAGCGCCGCCGCCGTAAGAAGCAGTTTCCCGGCATGATC CCCACGGCGGGTGTCCGTGTCCTCCGAGCAGCCGCCTCCGCCCCATCCGCGGCGCATCTC AACGGCGTCCCTCGCCGCCGTGGTCGGCCCCCGACCTCCTCCTCACTCCGCCTCGCGCGA GAGCTCGATGCTGAGGCTCTCATAGCCCTCGCGGCGGGGTTCCCGGCGGACTCCCTCTCC GAGGACGAGGTCGCCGCCGCCGTCCTCCCACGCATCGGTGGCGTCGACCAGACCAACTAT CTCGTCGTCCGCAACCACGTCCTCGCGCTCTGGCGCTCAAATCCGCTCTCCCCGGTTGCA TCCAACGCCGCGCTCGCCTCCATTCGCGCCGAGCACGCCCACCTCGTCGCTGCTGCGCAT TCCTTCCTTTCAGACCATGCGTACATCAATTTTGGCCTTGCTCCATCAGTTATTTCCCTC CCACCGTGCCCCCCTCCTTCCCTTCCTCCCCCCTCTGTCCTTATTGTTGGTGCTGGTTTT GCCGGCCTCGCTGCTGCACGGCACCTGATGTCCCTTGGCTTCAAGGTCGCCATTGTTGAA GGACGACTGCGCCCTGGCGGCCGTGTGTTTACTAAGTCTATGCGCTCCACTGCTGCAGAA TATCCTGACATTGCAGCTGCTGCTGATCTTGGAGGCAGTGTGCTCACCGGTATCAATGGA AATCCCCTTGGTGTCATTGCACGGCAGCTTGGGTTTCCACTGCATAAGGTGCGGGACAAG TGCCCGCTGTATCTTCCGGATGGTCGCCCAGTTGACCCTGACATGGACGCCCGTGTTGAG GCTGCCTTTAACCAGCTTCTTGATAAGGTCTGCCAACTGCGGCAGGTTGTTGCGGACAGC ATCCCACATGGCGTGGATGTGTCACTTGGCATGGCATTGGAGGCGTTCCGAGCGGCACAT GGTGTCGCTGCTGAGCGAGAGGAACGAATGCTTCTTGACTGGCATCTAGCTAATCTGGAG TATGCCAATGCTGCTCCTCTAGTTGATCTATCCATGGCCTTCTGGGATCAGGATGATCCA TATGAAATGGGTGGTGACCACTGCTTTATTCCTGGCGGCAATTCTCGTTTTGTCCGTGCG CTTGCTGATGGCATCCCAATATTCTATGGGCAGAATGTGCGAAGGATACAGTATGGGTGT GATGGTGCGATGGTGTACACGGATAAACAGACTTTCCGTGGTGATATGGTGCTCTGCACT GTCCCCCTTGGTGTGCTCAAGAAGGGTAACATTCAGTTTGTGCCTGAGCTCCCAGCTCAG AAGCGAGAGGCCATCGAAAGATTGGGTTTTGGTTTGCTTAACAAGGTTGTGCTGCTGTTC CCCTATGACTTCTGGGATGGCAGGATCGATACATTTGGGCACTTGACGGAGGATTCTGGT CAGCGTGGAGAATTTTTCCTGTTCTATAGCTATTCATCGGTCTCAGGAGGGCCACTGCTC ATTGCGCTTGTTGCTGGGGAATCTGCAATCGAGTTTGAGAAGACATCGCCAGCGGAAAAT GTTGAGAAGGTGCTAGAAACACTTAGGAAAATATTTTCACCAAAGGGGATTGAGGTTCCA AAGCCTTTGCAGGCCATATGTACTCGATGGGGTACTGATAAGTTTACATATGGTTCATAT TCTTATGTGGCTATTGGATCTTCTGGTGACGATTATGACATTCTGGCAGAGAGTGTGTGC GACAGAGTTTTCTTTGCTGGGGAGGCAACAAATAGGCGGTATCCTGCAACGATGCATGGA GCTTTACTTAGCGGGTACAGGGAGGCTGCCAACATTGTAAGAGCAGCTAGGAGGAGAGCG AAAAAGGTGGACTCACCTAAGAAAATGGATGTTAACAATGAAGTCAAATATGAAGTTAAA GTCGACAACATTGATCTGGATGATCTCTTCCGTACTCCTGATGCTGCTTTTGGGGGCTTC TCAGTTCTCCATGATCCATCTACCTCTGAACCTGATTCAATTTCATTGTTACGTGTTGGA ATTGGTGCAAGAAAGTTAGGATCTGGCTCGCTTTTCCTCTATGGTTTAATTATGCGAAAA AATGTAGCCAATTTAGCTGCAATGGAGGGTGATGAGCAACGATTGAGTACACTGTACCGA GATTTTGGGACAAAACTCGTGGGTTTAGATGGCTTGGGTGACTCTGGGTCAAGCCTTATA TCTCGGATAAAAGCTGCTGCTAGGAAATAA

Peptide Sequence

PEP ID	Os02t0755200-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:31773356:31776401:-1 gene:Os02g0755200 transcript:Os02t0755200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SWIRM domain-containing protein HDMA702, histone lysine-specific demethylase 702, polyamine oxidase 8 description:Similar to amine oxidase family protein. (Os02t0755200-01)
Sequence	MEEGSEAQPPLQPEAVSAEASEPPPPVPMDQDEGQAAAAEAMEGEAEGAAAAAGTIEGEA GYAAADADPMEDEAADEAGAAEPMEDDPPTSSAPSATAAVDDSTIARKRRRRKKQFPGMI PTAGVRVLRAAASAPSAAHLNGVPRRRGRPPTSSSLRLARELDAEALIALAAGFPADSLS EDEVAAAVLPRIGGVDQTNYLVVRNHVLALWRSNPLSPVASNAALASIRAEHAHLVAAAH SFLSDHAYINFGLAPSVISLPPCPPPSLPPPSVLIVGAGFAGLAAARHLMSLGFKVAIVE GRLRPGGRVFTKSMRSTAAEYPDIAAAADLGGSVLTGINGNPLGVIARQLGFPLHKVRDK CPLYLPDGRPVDPDMDARVEAAFNQLLDKVCQLRQVVADSIPHGVDVSLGMALEAFRAAH GVAAEREERMLLDWHLANLEYANAAPLVDLSMAFWDQDDPYEMGGDHCFIPGGNSRFVRA LADGIPIFYGQNVRRIQYGCDGAMVYTDKQTFRGDMVLCTVPLGVLKKGNIQFVPELPAQ KREAIERLGFGLLNKVVLLFPYDFWDGRIDTFGHLTEDSGQRGEFFLFYSYSSVSGGPLL IALVAGESAIEFEKTSPAENVEKVLETLRKIFSPKGIEVPKPLQAICTRWGTDKFTYGSY SYVAIGSSGDDYDILAESVCDRVFFAGEATNRRYPATMHGALLSGYREAANIVRAARRRA KKVDSPKKMDVNNEVKYEVKVDNIDLDDLFRTPDAAFGGFSVLHDPSTSEPDSISLLRVG IGARKLGSGSLFLYGLIMRKNVANLAAMEGDEQRLSTLYRDFGTKLVGLDGLGDSGSSLI SRIKAAARK

Transcript Sequence

Transcript ID	Os02t0755200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:31773356:31776401:-1 gene:Os02g0755200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SWIRM domain-containing protein HDMA702, histone lysine-specific demethylase 702, polyamine oxidase 8 description:Similar to amine oxidase family protein. (Os02t0755200-01)
Sequence	GCACAGTGCCGGCCCTAGGCCATCCAACCCCTGAACCCTCTCAATTTCTCCCCCAAATCC CCCGCTCCCATCCGGCGAGCTCGCCGCCCCGCCGCCGCCACGCGGAAACCCGCAATGGAG GAAGGCAGCGAGGCGCAGCCGCCGCTCCAGCCGGAGGCCGTATCAGCCGAAGCCTCGGAG CCGCCGCCTCCTGTCCCAATGGACCAAGACGAGGGCCAGGCGGCAGCTGCGGAGGCCATG GAGGGGGAAGCTGAAGGCGCTGCGGCGGCCGCGGGGACCATTGAGGGCGAAGCGGGATAT GCCGCGGCGGATGCTGATCCCATGGAGGATGAAGCGGCGGACGAAGCCGGCGCCGCTGAG CCCATGGAGGACGACCCGCCGACGTCGTCCGCGCCGTCCGCCACCGCGGCCGTTGACGAC TCGACCATCGCGCGGAAGCGCCGCCGCCGTAAGAAGCAGTTTCCCGGCATGATCCCCACG GCGGGTGTCCGTGTCCTCCGAGCAGCCGCCTCCGCCCCATCCGCGGCGCATCTCAACGGC GTCCCTCGCCGCCGTGGTCGGCCCCCGACCTCCTCCTCACTCCGCCTCGCGCGAGAGCTC GATGCTGAGGCTCTCATAGCCCTCGCGGCGGGGTTCCCGGCGGACTCCCTCTCCGAGGAC GAGGTCGCCGCCGCCGTCCTCCCACGCATCGGTGGCGTCGACCAGACCAACTATCTCGTC GTCCGCAACCACGTCCTCGCGCTCTGGCGCTCAAATCCGCTCTCCCCGGTTGCATCCAAC GCCGCGCTCGCCTCCATTCGCGCCGAGCACGCCCACCTCGTCGCTGCTGCGCATTCCTTC CTTTCAGACCATGCGTACATCAATTTTGGCCTTGCTCCATCAGTTATTTCCCTCCCACCG TGCCCCCCTCCTTCCCTTCCTCCCCCCTCTGTCCTTATTGTTGGTGCTGGTTTTGCCGGC CTCGCTGCTGCACGGCACCTGATGTCCCTTGGCTTCAAGGTCGCCATTGTTGAAGGACGA CTGCGCCCTGGCGGCCGTGTGTTTACTAAGTCTATGCGCTCCACTGCTGCAGAATATCCT GACATTGCAGCTGCTGCTGATCTTGGAGGCAGTGTGCTCACCGGTATCAATGGAAATCCC CTTGGTGTCATTGCACGGCAGCTTGGGTTTCCACTGCATAAGGTGCGGGACAAGTGCCCG CTGTATCTTCCGGATGGTCGCCCAGTTGACCCTGACATGGACGCCCGTGTTGAGGCTGCC TTTAACCAGCTTCTTGATAAGGTCTGCCAACTGCGGCAGGTTGTTGCGGACAGCATCCCA CATGGCGTGGATGTGTCACTTGGCATGGCATTGGAGGCGTTCCGAGCGGCACATGGTGTC GCTGCTGAGCGAGAGGAACGAATGCTTCTTGACTGGCATCTAGCTAATCTGGAGTATGCC AATGCTGCTCCTCTAGTTGATCTATCCATGGCCTTCTGGGATCAGGATGATCCATATGAA ATGGGTGGTGACCACTGCTTTATTCCTGGCGGCAATTCTCGTTTTGTCCGTGCGCTTGCT GATGGCATCCCAATATTCTATGGGCAGAATGTGCGAAGGATACAGTATGGGTGTGATGGT GCGATGGTGTACACGGATAAACAGACTTTCCGTGGTGATATGGTGCTCTGCACTGTCCCC CTTGGTGTGCTCAAGAAGGGTAACATTCAGTTTGTGCCTGAGCTCCCAGCTCAGAAGCGA GAGGCCATCGAAAGATTGGGTTTTGGTTTGCTTAACAAGGTTGTGCTGCTGTTCCCCTAT GACTTCTGGGATGGCAGGATCGATACATTTGGGCACTTGACGGAGGATTCTGGTCAGCGT GGAGAATTTTTCCTGTTCTATAGCTATTCATCGGTCTCAGGAGGGCCACTGCTCATTGCG CTTGTTGCTGGGGAATCTGCAATCGAGTTTGAGAAGACATCGCCAGCGGAAAATGTTGAG AAGGTGCTAGAAACACTTAGGAAAATATTTTCACCAAAGGGGATTGAGGTTCCAAAGCCT TTGCAGGCCATATGTACTCGATGGGGTACTGATAAGTTTACATATGGTTCATATTCTTAT GTGGCTATTGGATCTTCTGGTGACGATTATGACATTCTGGCAGAGAGTGTGTGCGACAGA GTTTTCTTTGCTGGGGAGGCAACAAATAGGCGGTATCCTGCAACGATGCATGGAGCTTTA CTTAGCGGGTACAGGGAGGCTGCCAACATTGTAAGAGCAGCTAGGAGGAGAGCGAAAAAG GTGGACTCACCTAAGAAAATGGATGTTAACAATGAAGTCAAATATGAAGTTAAAGTCGAC AACATTGATCTGGATGATCTCTTCCGTACTCCTGATGCTGCTTTTGGGGGCTTCTCAGTT CTCCATGATCCATCTACCTCTGAACCTGATTCAATTTCATTGTTACGTGTTGGAATTGGT GCAAGAAAGTTAGGATCTGGCTCGCTTTTCCTCTATGGTTTAATTATGCGAAAAAATGTA GCCAATTTAGCTGCAATGGAGGGTGATGAGCAACGATTGAGTACACTGTACCGAGATTTT GGGACAAAACTCGTGGGTTTAGATGGCTTGGGTGACTCTGGGTCAAGCCTTATATCTCGG ATAAAAGCTGCTGCTAGGAAATAATACCAAGCCAAGATGTTGGAATGATTCACTGTCAGC TGTAATAGTCGTGAGCGCTGAGCATTGACTTGCATGCTCAGCATAGTTACTGACCCTGGA GTAATTCGTTCATTTCATTGATTACCTTAAGCATATTAACTCTGATCCAAGGTGTAAGTT GTGCCAATGTTATGCTGATAAAACAATGGAGAGTATTTGAAGATCATATTACCATGGAAA TAATGGAAGATTATTGCCATCACTTTCTGTGCACAAATGATACACCACTCTGAGACTACT TTGATGGCATCGTTACATATATTAATTATGTTAAGTTTTATCTAGCCCTTGTTATCATTT CTTCTGACTTTCAGGGCTTATGATTTCAATAGATGAGTTATTGTGT