Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0755000-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:31763222:31768620:-1 gene:Os02g0755000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TUMOROUS SHOOT DEVELOPMENT 2 description:Putative methyltransferase, Pectin synthesis and methylesterification, Root development, Cellular adhesion (Os02t0755000-01)
Sequence	ATGTCGCGGGCGCTGTACCGGGGGGCGTCGGGGATCGGCGGCAAGCCGGTGGCGGGGTAT GACGCGGCCGACGAGGCGCGGTACGACCCCAAGGAGCCCAGCGAGAACGGCATTGGCGGC GCCGGCGGGAGGGGGAGGAAGCGGCACCTCGCGGTGGCGGCGGTTAAGATCGGGGTCCTC GTGCTCGCGGCGGCCGCGCTCGTGGGGTCGGTGGCGTGGGCGGGGTCGCTGTACGCCGGG CGAGGGGCTGCCGCGGCTGCGGCCGCGGCCGCCGCCAGCCGTGGGTACCGCCGGCTGCAG GAGCAGCTGGTCACGGACCTGCTCGACATCGGCGAGCTCGCCGGCGGCGGGGTCCGCGCG CGGGAGGCGGAGGTGTGCGTTCCTGAGTACGAGAACTACGTGCCGTGCTACTACAACGTG TCCGACGCCGTCGACGTAGCGGATCTGGGCGGTGGCGTCGTGATAAGCTACGAGCGGCAG TGCTCGCGCGAGGGCAAAATCGCGTGCCTCGTCGCGCCGCCACGGAGCTACCGGATCCCC GTGCGGTGGCCGAGTGGCAAGGGGTTCATCTGGAAAGACAACGTGCGGATTAGCGGGCAG GAGTTCTCGTCGGGGAGCCTGTTCAAGAGGATGATGGTGGAGGAGGACCAGATCTCATTC CCATCGGACGCACATATGGCTGATGGTGTGGAGGATTACGCACATCAGATTGCAGAGATG ATTGGTCTGCGGAACGAGTTCAATTTCAATGAGGCCGGGGTTAGGACAGTTCTTGATATA GAATGTGGATTTGGTACCTTGGGAGCACACCTTTTTCAGAGAGATCTCTTGACCATGTGC ATTGCTAACTATGAGGCGTCAGGCAGTCAAGTGCAAATAACACTAGAGAGAGGAATCCCT GCAATGATTGGTTCATTTGCATCGAAACAGCTTCCATATCCCTATCTTTCTTTTGATATG GTGCATTGTGCAAAATGCAATATTGAATGGGACAAAAATGATGGTGGTTTCTTGGTTGAA GTGGATAGATTATTAAGGCCCAGTGGATACTTTGTGTGGACATCAAGTCTGAATACACAC AGGGCTTTGCGTGACAAAGAAAATCAAAAGAAGTGGAGAACCATTCGCGACTTTGCTGAT AGCCTCTGTTGGGAGATGTTGTCACAACAAGATGAGACAATTGTGTGGAAAAAGACAAAT AAATTGGATTGCTACAGTTCAAGGAAATCAGGCCCTGTGCTTTGTACTCATGATCCAGAA TCACCATATTACCAACCACTAAATCCCTGCATAGCAGGAACAAGAAGTCAGCGATGGATT TCCATTGAACATCGCACTACATGGCCTTCTCAGTCTAGGTTGAACTCAACAGAACTTGAT ATACATGGGGTGCATTCAGAAGACTTTGCCGAGAATACTGCAAACTGGGACTCAATGGTG CGAAACTACTGGTCTTTGCTGTCTCCTCTTATATTTTCTGATCATCCAAAGAGACCCGGT GATGAGGACCCACAACCACCATTTAACATGCTAAGGAATGTTCTAGACATGAATGCTCAC TTCGGTGGATTTAATGCTGCTTTACTTAAGGCTGGAAAATCTGTATGGGTGATGAATGTT GTTCCTACAAATGCTCCAAACTATCTGCCGCTAATTTTTGATCGTGGTTTTATTGGGGTT CAACATGACTGGTGTGAAGCATTTCCAACTTATCCAAGAACATATGATATGGTCCATGCT GATGGCTTTCTATCACTTGAGAAGCACCAAAAGCATAGATGTTCTACTCTTGATATATTC TTGGAAGTTGATCGCATCCTACGTCCAGAGGGTTGGGTTATAATCCGTGACACTGCCCCT CTTATTGAAGCTGCAAGATCTGTTGTAACACAGCTCAGGTGGGATGCCCGTATTTTGGAT CTTGACATAGCTAGTGATGAAAAACTTCTGGTCTGTCAGAAGCCATTTATTAGAAAACAA TGA

Peptide Sequence

PEP ID	Os02t0755000-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:31763222:31768620:-1 gene:Os02g0755000 transcript:Os02t0755000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TUMOROUS SHOOT DEVELOPMENT 2 description:Putative methyltransferase, Pectin synthesis and methylesterification, Root development, Cellular adhesion (Os02t0755000-01)
Sequence	MSRALYRGASGIGGKPVAGYDAADEARYDPKEPSENGIGGAGGRGRKRHLAVAAVKIGVL VLAAAALVGSVAWAGSLYAGRGAAAAAAAAAASRGYRRLQEQLVTDLLDIGELAGGGVRA REAEVCVPEYENYVPCYYNVSDAVDVADLGGGVVISYERQCSREGKIACLVAPPRSYRIP VRWPSGKGFIWKDNVRISGQEFSSGSLFKRMMVEEDQISFPSDAHMADGVEDYAHQIAEM IGLRNEFNFNEAGVRTVLDIECGFGTLGAHLFQRDLLTMCIANYEASGSQVQITLERGIP AMIGSFASKQLPYPYLSFDMVHCAKCNIEWDKNDGGFLVEVDRLLRPSGYFVWTSSLNTH RALRDKENQKKWRTIRDFADSLCWEMLSQQDETIVWKKTNKLDCYSSRKSGPVLCTHDPE SPYYQPLNPCIAGTRSQRWISIEHRTTWPSQSRLNSTELDIHGVHSEDFAENTANWDSMV RNYWSLLSPLIFSDHPKRPGDEDPQPPFNMLRNVLDMNAHFGGFNAALLKAGKSVWVMNV VPTNAPNYLPLIFDRGFIGVQHDWCEAFPTYPRTYDMVHADGFLSLEKHQKHRCSTLDIF LEVDRILRPEGWVIIRDTAPLIEAARSVVTQLRWDARILDLDIASDEKLLVCQKPFIRKQ

Transcript Sequence

Transcript ID	Os02t0755000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:31763222:31768620:-1 gene:Os02g0755000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TUMOROUS SHOOT DEVELOPMENT 2 description:Putative methyltransferase, Pectin synthesis and methylesterification, Root development, Cellular adhesion (Os02t0755000-01)
Sequence	GGTATCTATCTCCCTCTCCTCTCTCTCGGCCTCTCTCCATTACTCGCCGCGTGCAATGGC GAGGCAGTGGTGGTAGTAGGCTGGTAGTGGTAGCGAAGACAGTGGAGTGGGCGGGCGAGT GCGGCGTCCGCGGGTGTGCTATTGCGGAATTGCTGCGCTCCGGTTGTGTCTGGTTTCCAT GCGGCTGTGGTTGGGGCCGTGAGATCCGCAGCGATGTCGCGGGCGCTGTACCGGGGGGCG TCGGGGATCGGCGGCAAGCCGGTGGCGGGGTATGACGCGGCCGACGAGGCGCGGTACGAC CCCAAGGAGCCCAGCGAGAACGGCATTGGCGGCGCCGGCGGGAGGGGGAGGAAGCGGCAC CTCGCGGTGGCGGCGGTTAAGATCGGGGTCCTCGTGCTCGCGGCGGCCGCGCTCGTGGGG TCGGTGGCGTGGGCGGGGTCGCTGTACGCCGGGCGAGGGGCTGCCGCGGCTGCGGCCGCG GCCGCCGCCAGCCGTGGGTACCGCCGGCTGCAGGAGCAGCTGGTCACGGACCTGCTCGAC ATCGGCGAGCTCGCCGGCGGCGGGGTCCGCGCGCGGGAGGCGGAGGTGTGCGTTCCTGAG TACGAGAACTACGTGCCGTGCTACTACAACGTGTCCGACGCCGTCGACGTAGCGGATCTG GGCGGTGGCGTCGTGATAAGCTACGAGCGGCAGTGCTCGCGCGAGGGCAAAATCGCGTGC CTCGTCGCGCCGCCACGGAGCTACCGGATCCCCGTGCGGTGGCCGAGTGGCAAGGGGTTC ATCTGGAAAGACAACGTGCGGATTAGCGGGCAGGAGTTCTCGTCGGGGAGCCTGTTCAAG AGGATGATGGTGGAGGAGGACCAGATCTCATTCCCATCGGACGCACATATGGCTGATGGT GTGGAGGATTACGCACATCAGATTGCAGAGATGATTGGTCTGCGGAACGAGTTCAATTTC AATGAGGCCGGGGTTAGGACAGTTCTTGATATAGAATGTGGATTTGGTACCTTGGGAGCA CACCTTTTTCAGAGAGATCTCTTGACCATGTGCATTGCTAACTATGAGGCGTCAGGCAGT CAAGTGCAAATAACACTAGAGAGAGGAATCCCTGCAATGATTGGTTCATTTGCATCGAAA CAGCTTCCATATCCCTATCTTTCTTTTGATATGGTGCATTGTGCAAAATGCAATATTGAA TGGGACAAAAATGATGGTGGTTTCTTGGTTGAAGTGGATAGATTATTAAGGCCCAGTGGA TACTTTGTGTGGACATCAAGTCTGAATACACACAGGGCTTTGCGTGACAAAGAAAATCAA AAGAAGTGGAGAACCATTCGCGACTTTGCTGATAGCCTCTGTTGGGAGATGTTGTCACAA CAAGATGAGACAATTGTGTGGAAAAAGACAAATAAATTGGATTGCTACAGTTCAAGGAAA TCAGGCCCTGTGCTTTGTACTCATGATCCAGAATCACCATATTACCAACCACTAAATCCC TGCATAGCAGGAACAAGAAGTCAGCGATGGATTTCCATTGAACATCGCACTACATGGCCT TCTCAGTCTAGGTTGAACTCAACAGAACTTGATATACATGGGGTGCATTCAGAAGACTTT GCCGAGAATACTGCAAACTGGGACTCAATGGTGCGAAACTACTGGTCTTTGCTGTCTCCT CTTATATTTTCTGATCATCCAAAGAGACCCGGTGATGAGGACCCACAACCACCATTTAAC ATGCTAAGGAATGTTCTAGACATGAATGCTCACTTCGGTGGATTTAATGCTGCTTTACTT AAGGCTGGAAAATCTGTATGGGTGATGAATGTTGTTCCTACAAATGCTCCAAACTATCTG CCGCTAATTTTTGATCGTGGTTTTATTGGGGTTCAACATGACTGGTGTGAAGCATTTCCA ACTTATCCAAGAACATATGATATGGTCCATGCTGATGGCTTTCTATCACTTGAGAAGCAC CAAAAGCATAGATGTTCTACTCTTGATATATTCTTGGAAGTTGATCGCATCCTACGTCCA GAGGGTTGGGTTATAATCCGTGACACTGCCCCTCTTATTGAAGCTGCAAGATCTGTTGTA ACACAGCTCAGGTGGGATGCCCGTATTTTGGATCTTGACATAGCTAGTGATGAAAAACTT CTGGTCTGTCAGAAGCCATTTATTAGAAAACAATGAACAGGACAGCTGACATGAGATATG AACTTATTCTTTACCACCTACATGGCTACATACTGTTAAAACTATTGTCCAAGAACAGTT GAGAACAGAATTCAGTTTCAACACTAGAGGCATGGTCAGCTAACTCGTCATGCATCGTCA TGGAACCGCAAGGTGCCATTGGACTGATCGGACAAGTGCGTGCTGCAGAGAGGCCTGGTA GCTAAGCTTTCCAGGCCGAGGTTTTATTGCCAGGGTACAGAGATGAAGCCTTCAAAGTTA TTTGAGTAGCACAAAGACTATATATTCAATAAAGGGATGATGCTGCGGTGTACATAATCG CGGCCAATGTGCCATATAGGTATAATTCATTTTTTCCCCTCACATTCTTCTTTTTGTAAC GGTACTCATTTGTTTTGTATACCGATAGTCTGTAAATTCGTTGGTATCTATACCTGTCAT CCCTGTGAAATCAAGATAAGTTATTCTCGAAATGAATGAGAAAC