Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0753000-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:31663080:31665818:1 gene:Os02g0753000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TREHALOSE-6-PHOSPHATE PHOSHPHATASE 4 description:Similar to Trehalose-6-phosphate phosphatase. (Os02t0753000-01)
Sequence

ATGACGAACCAGGACGTGGTGGTTTCTGAGATGGGCATCGCGGCAGGCGCGGCGCTGCCG
GGAGGACCGGCCGGCCCGGCGGGCGGCCTCTTCGCGTGCCGCAGCGCGGCCGCGTCGATG
AGGCAGACGTACCTCGACCTCGCCGCGGCGGCGGTGGCGGCGCGCTCCGCGAGCTGCACC
AGCTGGGCCGACGCCATGCGCGCCTCCTCCCCCACCCGCTCGTCCCGCTCCGCCTCCGAC
GTCGACGAGTTCACCGCCTGGGTGAGGAAGCACCCGTCGGCGCTTAGCAAGTTCGAGGAG
ATCGCCGCCAAGTCCAGGGGGAAGAAGATCGTAATGTTCATGGACTACGACGGCACGCTC
TCTCCCATCGTCGCCGACCCCGACACGGCCTACATGAGCGACGCGATGAGGGCGGCGGTG
CGCGAAGTCGCCAAGACCTTCCCGACGGCGATCGTCAGCGGGCGGTGCCGCGACAAGGTT
CGCAACTTCGTCGGCCTCTCCGACCTCTACTACGCCGGCAGCCATGGCATGGACATCAAG
GGACCAAGCTCCAACCCGGAGTCTGCCCTTTGCCAGCCAGCAAGCGAGTTCCTCCCCATG
ATCGACGAGGTGTACAAGACGCTGGTGGAAAAGACGAAATCTACACCTGGAGCCAAGGTG
GAGAACAACAAGTTCTGCCTGTCCGTCCACTTCAGATGTGTAGATGAAAAGAGATGGAAT
GCTTTGGGGGAGCAGGTCAAGGCCGTGATCAAGGAATACCCAAAGTTGAAGCTTACCCAA
GGAAGGAAGGTTTTGGAGATCAGGCCGAGCATTGAGTGGGACAAGGGCAAGGCTCTGGAG
TTCTTGCTTGAATCGCTGGGATTCGCCAACTGCGGCGACGTCATGCCGGTGTACATCGGT
GACGACCGCACCGACGAGGACGCCTTCAAGGTGTTGAGAAAGAGAGGTCAGGGCCTGGGA
ATCCTAGTCTCCAAGTGCCCCAAGGACACCAACGCCTCCTACTCTCTCCAGGACCCAACA
GAGGTGATGGAGTTCTTGCTCAGGCTGGTGGAGTGGAAGCGGAAGTCGTCGTCGTCGTCG
TTGATGATTCGTCCGAGAGTGTAG

Peptide Sequence

PEP ID

Os02t0753000-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:31663080:31665818:1 gene:Os02g0753000 transcript:Os02t0753000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TREHALOSE-6-PHOSPHATE PHOSHPHATASE 4 description:Similar to Trehalose-6-phosphate phosphatase. (Os02t0753000-01)
Sequence

MTNQDVVVSEMGIAAGAALPGGPAGPAGGLFACRSAAASMRQTYLDLAAAAVAARSASCT
SWADAMRASSPTRSSRSASDVDEFTAWVRKHPSALSKFEEIAAKSRGKKIVMFMDYDGTL
SPIVADPDTAYMSDAMRAAVREVAKTFPTAIVSGRCRDKVRNFVGLSDLYYAGSHGMDIK
GPSSNPESALCQPASEFLPMIDEVYKTLVEKTKSTPGAKVENNKFCLSVHFRCVDEKRWN
ALGEQVKAVIKEYPKLKLTQGRKVLEIRPSIEWDKGKALEFLLESLGFANCGDVMPVYIG
DDRTDEDAFKVLRKRGQGLGILVSKCPKDTNASYSLQDPTEVMEFLLRLVEWKRKSSSSS
LMIRPRV

Transcript Sequence

Transcript ID

Os02t0753000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:31663080:31665818:1 gene:Os02g0753000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TREHALOSE-6-PHOSPHATE PHOSHPHATASE 4 description:Similar to Trehalose-6-phosphate phosphatase. (Os02t0753000-01)
Sequence

CTCTCAAACTCTCGGAGAAGCGAGCACACACACTCACTCCCTGTCTCCTCCTCCTCCTCC
TCCCTTGAGGCTGTTCGTCTCGACGAGTGCTTGGCTTTGTGTTTGTGGTGTGTGATCATG
ACGAACCAGGACGTGGTGGTTTCTGAGATGGGCATCGCGGCAGGCGCGGCGCTGCCGGGA
GGACCGGCCGGCCCGGCGGGCGGCCTCTTCGCGTGCCGCAGCGCGGCCGCGTCGATGAGG
CAGACGTACCTCGACCTCGCCGCGGCGGCGGTGGCGGCGCGCTCCGCGAGCTGCACCAGC
TGGGCCGACGCCATGCGCGCCTCCTCCCCCACCCGCTCGTCCCGCTCCGCCTCCGACGTC
GACGAGTTCACCGCCTGGGTGAGGAAGCACCCGTCGGCGCTTAGCAAGTTCGAGGAGATC
GCCGCCAAGTCCAGGGGGAAGAAGATCGTAATGTTCATGGACTACGACGGCACGCTCTCT
CCCATCGTCGCCGACCCCGACACGGCCTACATGAGCGACGCGATGAGGGCGGCGGTGCGC
GAAGTCGCCAAGACCTTCCCGACGGCGATCGTCAGCGGGCGGTGCCGCGACAAGGTTCGC
AACTTCGTCGGCCTCTCCGACCTCTACTACGCCGGCAGCCATGGCATGGACATCAAGGGA
CCAAGCTCCAACCCGGAGTCTGCCCTTTGCCAGCCAGCAAGCGAGTTCCTCCCCATGATC
GACGAGGTGTACAAGACGCTGGTGGAAAAGACGAAATCTACACCTGGAGCCAAGGTGGAG
AACAACAAGTTCTGCCTGTCCGTCCACTTCAGATGTGTAGATGAAAAGAGATGGAATGCT
TTGGGGGAGCAGGTCAAGGCCGTGATCAAGGAATACCCAAAGTTGAAGCTTACCCAAGGA
AGGAAGGTTTTGGAGATCAGGCCGAGCATTGAGTGGGACAAGGGCAAGGCTCTGGAGTTC
TTGCTTGAATCGCTGGGATTCGCCAACTGCGGCGACGTCATGCCGGTGTACATCGGTGAC
GACCGCACCGACGAGGACGCCTTCAAGGTGTTGAGAAAGAGAGGTCAGGGCCTGGGAATC
CTAGTCTCCAAGTGCCCCAAGGACACCAACGCCTCCTACTCTCTCCAGGACCCAACAGAG
GTGATGGAGTTCTTGCTCAGGCTGGTGGAGTGGAAGCGGAAGTCGTCGTCGTCGTCGTTG
ATGATTCGTCCGAGAGTGTAGCGGCGACACGGTGTAGAGGCCGTAAGAAACTGAAACTAA
GATGGTCAATCATGCGAACATGCGAACATACCCCACCAACACCACGTACTACCCCCATTT
TTTTCCGATGATTTCTGTGGTTGGCCTCTGCGACGGACTCGTGGTGGTTACACGCTAGCT
GTTCGATTCCGTCCCCTGTGCCGCCGAGGAAAAGGAGACCACC