Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0752200-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:31609801:31614169:-1 gene:Os02g0752200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Beta-D-xylosidase. (Os02t0752200-01)
Sequence	ATGGGACGCCGCGCGCGCGCTCTCCTCCACGCGCCGGCGCCGCTCCTGCTGCTGCTGGCA CTGGCCGCCGCGGCGGCGGCGGTCGCCGTGGCGTCGGGCCCGCCCTTCTCCTGCGGCGCG CCGTCCAGCGCGGCGTTCTGCAACCCGAGGCTGCCCATCGAGCAGCGCGCGGACGACCTC GTGTCGAGGCTGACGCTGGAGGAGAAGATCTCGCAGCTCGGGGACCAGTCGCCGGCCGTC GACCGGCTCGGCGTCCCGGCGTACAAGTGGTGGTCGGAGGCGCTCCACGGCGTCTCCAAC GCCGGCCGCGGCATCCACCTCGACGGCCCGCTCCGCGCCGCCACCAGCTTCCCGCAGGTC ATCCTCACCGCCGCGTCATTCAACCCGCACCTCTGGTACCGTATCGGCCAGGTGATCGGC ACGGAGGCGAGGGCGGTGTACAACAACGGGCAGGCGGAAGGGCTCACGTTCTGGGCGCCA AACATCAACGTGTTCAGGGACCCGAGGTGGGGCCGCGGGCAGGAGACCCCCGGCGAGGAC CCCACGGTGACCGGCAAGTACGCCGCCGTGTTCGTCCGCGGCGTCCAGGGCTACGCCCTC GCCGGCGCCATCAACTCCACCGACCTCGAGGCCTCCGCCTGCTGCAAGCACTTCACCGCC TACGACCTCGAGAACTGGAAGGGCGTCACCCGCTACGCCTTCGACGCCAAGGTGACGGCG CAGGACCTGGCCGACACGTACAACCCTCCGTTCAGAAGCTGCGTCGAGGACGGCGGGGCC AGCGGCATCATGTGCTCCTACAACCGCGTCAATGGCGTGCCAACTTGTGCCGATTACAAC CTCCTCTCCAAAACTGCAAGGGGAGATTGGAGGTTTTACGGATATATCACCTCAGATTGT GATGCTGTGTCCATCATCCATGATGTCCAAGGATATGCCAAGACAGCGGAAGATGCAGTT GCAGATGTCCTCAAGGCTGGAATGGACGTGAACTGCGGCAGCTACGTGCAGGAACATGGT CTATCTGCAATCCAGCAAGGGAAGATCACAGAACAAGACATCAACAGAGCCCTCCACAAC CTCTTCGCTGTCAGGATGAGGCTGGGGCTCTTCAACGGCAATCCAAAGTACAACCGCTAC GGTAACATTGGCCCAGACCAGGTGTGCACGCAGGAGCACCAAAACCTTGCCCTTGAAGCA GCACAACATGGCGTTGTCCTACTGAAGAACGACGCCAATGCTCTCCCCCTGTCCAAATCA CAAGTCTCATCCATTGCTGTCATTGGGCACAACGCAAATGACGCCACGAGATTGCTTGGG AATTACTTCGGCCCTCCTTGCATATCGGTGACTCCTCTCCAAGTGCTGCAAGGCTATGTG AAGGACACCAGGTTCCTAGCTGGGTGCAACTCGGCTGCCTGCAATGTGTCATCAATTGGT GAAGCGGCGCAATTGGCAAGTTCAGTGGACTACGTTGTGCTGTTCATGGGATTAGACCAA GATCAGGAGAGGGAAGAGGTTGATAGGCTGGAACTGTCGCTCCCAGGAATGCAGGAGAAC CTCATCAACACGGTCGCTAACGCGGCAAAGAAGCCGGTGATCTTGGTGCTACTGTGTGGT GGTCCAGTGGATGTGACCTTTGCTAAGTATAATCCCAAGATTGGGGCCATCCTGTGGGCT GGTTACCCTGGCGAGGCTGGAGGGATTGCGATTGCTCAGGTCCTCTTTGGAGAGCACAAC CCTGGTGGAAGGCTGCCAGTGACCTGGTATCCAAAGGAGTTCACGAGCGTGCCCATGACA GATATGCGGATGCGTGCCGATCCATCCACGGGATATCCCGGACGAACGTACAGGTTCTAC CGAGGCAACACCGTCTACAAGTTCGGCTACGGCCTCAGCTACTCGAAGTACTCTCACCAC TTCGTCGCAAACGGCACGAAGCTGCCGTCTTTGAGCAGCATCGATGGCCTGAAGGCGATG GCGACAGCAGCTGCAGGCACGGTGAGCTATGACGTCGAAGAGATTGGCCCCGAGACGTGT GACAAGCTCAAGTTCCCGGCGCTCGTCAGGGTGCAGAACCATGGCCCCATGGACGGCAGG CACCCCGTGCTGCTCTTCCTGCGCTGGCCGAACGGCGCGGCGGACGGCGGCAGGCCGGCG AGCCAGCTGATCGGCTTCCAGAGCCTGCACCTCAAGTCGATGCAGACTGTCCATGTGGAG TTCGAGGTGAGCCCATGCAAGCACTTCAGCAGAGCGACGGAGGACGGCAAGAAGGTGATT GATCATGGGTCGCATTTCATGATGGTTGGCGATGATGAGTTCGAGATGAGCTTCACGCCT TGA

Peptide Sequence

PEP ID	Os02t0752200-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:31609801:31614169:-1 gene:Os02g0752200 transcript:Os02t0752200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Beta-D-xylosidase. (Os02t0752200-01)
Sequence	MGRRARALLHAPAPLLLLLALAAAAAAVAVASGPPFSCGAPSSAAFCNPRLPIEQRADDL VSRLTLEEKISQLGDQSPAVDRLGVPAYKWWSEALHGVSNAGRGIHLDGPLRAATSFPQV ILTAASFNPHLWYRIGQVIGTEARAVYNNGQAEGLTFWAPNINVFRDPRWGRGQETPGED PTVTGKYAAVFVRGVQGYALAGAINSTDLEASACCKHFTAYDLENWKGVTRYAFDAKVTA QDLADTYNPPFRSCVEDGGASGIMCSYNRVNGVPTCADYNLLSKTARGDWRFYGYITSDC DAVSIIHDVQGYAKTAEDAVADVLKAGMDVNCGSYVQEHGLSAIQQGKITEQDINRALHN LFAVRMRLGLFNGNPKYNRYGNIGPDQVCTQEHQNLALEAAQHGVVLLKNDANALPLSKS QVSSIAVIGHNANDATRLLGNYFGPPCISVTPLQVLQGYVKDTRFLAGCNSAACNVSSIG EAAQLASSVDYVVLFMGLDQDQEREEVDRLELSLPGMQENLINTVANAAKKPVILVLLCG GPVDVTFAKYNPKIGAILWAGYPGEAGGIAIAQVLFGEHNPGGRLPVTWYPKEFTSVPMT DMRMRADPSTGYPGRTYRFYRGNTVYKFGYGLSYSKYSHHFVANGTKLPSLSSIDGLKAM ATAAAGTVSYDVEEIGPETCDKLKFPALVRVQNHGPMDGRHPVLLFLRWPNGAADGGRPA SQLIGFQSLHLKSMQTVHVEFEVSPCKHFSRATEDGKKVIDHGSHFMMVGDDEFEMSFTP

Transcript Sequence

Transcript ID	Os02t0752200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:31609801:31614169:-1 gene:Os02g0752200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Beta-D-xylosidase. (Os02t0752200-01)
Sequence	ACATTCGCTCCGGAGCGCAGTACGTGACACCCGCACACGAAGCCATGGGACGCCGCGCGC GCGCTCTCCTCCACGCGCCGGCGCCGCTCCTGCTGCTGCTGGCACTGGCCGCCGCGGCGG CGGCGGTCGCCGTGGCGTCGGGCCCGCCCTTCTCCTGCGGCGCGCCGTCCAGCGCGGCGT TCTGCAACCCGAGGCTGCCCATCGAGCAGCGCGCGGACGACCTCGTGTCGAGGCTGACGC TGGAGGAGAAGATCTCGCAGCTCGGGGACCAGTCGCCGGCCGTCGACCGGCTCGGCGTCC CGGCGTACAAGTGGTGGTCGGAGGCGCTCCACGGCGTCTCCAACGCCGGCCGCGGCATCC ACCTCGACGGCCCGCTCCGCGCCGCCACCAGCTTCCCGCAGGTCATCCTCACCGCCGCGT CATTCAACCCGCACCTCTGGTACCGTATCGGCCAGGTGATCGGCACGGAGGCGAGGGCGG TGTACAACAACGGGCAGGCGGAAGGGCTCACGTTCTGGGCGCCAAACATCAACGTGTTCA GGGACCCGAGGTGGGGCCGCGGGCAGGAGACCCCCGGCGAGGACCCCACGGTGACCGGCA AGTACGCCGCCGTGTTCGTCCGCGGCGTCCAGGGCTACGCCCTCGCCGGCGCCATCAACT CCACCGACCTCGAGGCCTCCGCCTGCTGCAAGCACTTCACCGCCTACGACCTCGAGAACT GGAAGGGCGTCACCCGCTACGCCTTCGACGCCAAGGTGACGGCGCAGGACCTGGCCGACA CGTACAACCCTCCGTTCAGAAGCTGCGTCGAGGACGGCGGGGCCAGCGGCATCATGTGCT CCTACAACCGCGTCAATGGCGTGCCAACTTGTGCCGATTACAACCTCCTCTCCAAAACTG CAAGGGGAGATTGGAGGTTTTACGGATATATCACCTCAGATTGTGATGCTGTGTCCATCA TCCATGATGTCCAAGGATATGCCAAGACAGCGGAAGATGCAGTTGCAGATGTCCTCAAGG CTGGAATGGACGTGAACTGCGGCAGCTACGTGCAGGAACATGGTCTATCTGCAATCCAGC AAGGGAAGATCACAGAACAAGACATCAACAGAGCCCTCCACAACCTCTTCGCTGTCAGGA TGAGGCTGGGGCTCTTCAACGGCAATCCAAAGTACAACCGCTACGGTAACATTGGCCCAG ACCAGGTGTGCACGCAGGAGCACCAAAACCTTGCCCTTGAAGCAGCACAACATGGCGTTG TCCTACTGAAGAACGACGCCAATGCTCTCCCCCTGTCCAAATCACAAGTCTCATCCATTG CTGTCATTGGGCACAACGCAAATGACGCCACGAGATTGCTTGGGAATTACTTCGGCCCTC CTTGCATATCGGTGACTCCTCTCCAAGTGCTGCAAGGCTATGTGAAGGACACCAGGTTCC TAGCTGGGTGCAACTCGGCTGCCTGCAATGTGTCATCAATTGGTGAAGCGGCGCAATTGG CAAGTTCAGTGGACTACGTTGTGCTGTTCATGGGATTAGACCAAGATCAGGAGAGGGAAG AGGTTGATAGGCTGGAACTGTCGCTCCCAGGAATGCAGGAGAACCTCATCAACACGGTCG CTAACGCGGCAAAGAAGCCGGTGATCTTGGTGCTACTGTGTGGTGGTCCAGTGGATGTGA CCTTTGCTAAGTATAATCCCAAGATTGGGGCCATCCTGTGGGCTGGTTACCCTGGCGAGG CTGGAGGGATTGCGATTGCTCAGGTCCTCTTTGGAGAGCACAACCCTGGTGGAAGGCTGC CAGTGACCTGGTATCCAAAGGAGTTCACGAGCGTGCCCATGACAGATATGCGGATGCGTG CCGATCCATCCACGGGATATCCCGGACGAACGTACAGGTTCTACCGAGGCAACACCGTCT ACAAGTTCGGCTACGGCCTCAGCTACTCGAAGTACTCTCACCACTTCGTCGCAAACGGCA CGAAGCTGCCGTCTTTGAGCAGCATCGATGGCCTGAAGGCGATGGCGACAGCAGCTGCAG GCACGGTGAGCTATGACGTCGAAGAGATTGGCCCCGAGACGTGTGACAAGCTCAAGTTCC CGGCGCTCGTCAGGGTGCAGAACCATGGCCCCATGGACGGCAGGCACCCCGTGCTGCTCT TCCTGCGCTGGCCGAACGGCGCGGCGGACGGCGGCAGGCCGGCGAGCCAGCTGATCGGCT TCCAGAGCCTGCACCTCAAGTCGATGCAGACTGTCCATGTGGAGTTCGAGGTGAGCCCAT GCAAGCACTTCAGCAGAGCGACGGAGGACGGCAAGAAGGTGATTGATCATGGGTCGCATT TCATGATGGTTGGCGATGATGAGTTCGAGATGAGCTTCACGCCTTGATCGAGCTGGGTCC AGTTCATTGAGTTGGGGTTGGGTACTGATCGAGCTATTCCAAGCCAGCGCATGGTTGCAT TTCATTTGCTTGCTTGGGAAATCTGCTGCTTCGTTCAGGGGGCTGAGGATTTAAGTTGCT CAGCAAGTGTAACCATCTATCTTCTTTTCTCAAAAAGAAAAAAAAAGAATCTAACTTATG TGAACAAGAGAATGATTATTTAAGAAAGATTGAGGCACCGTTGACGTC