Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0749700-00
CDS Infomation	cds chromosome:IRGSP-1.0:2:31515301:31517784:-1 gene:Os02g0749700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LACCASE 10 description:Similar to cDNA, clone: J065097H05, full insert sequence. (Os02t0749700-00)
Sequence	ATGGGAACAGCCAAGTTACCTGCATTGCTTTGGTTACTAGCAGGCGTGGTGTTAGCACTT GCAGTTAACCCCGCTCATGGCGCCAAGACTCGCCACTACGATTTCTTCATTACGGAGACC AACTACACGAGGCTCTGCCACGAGAAGAGCATCCTCACCGTGAACGGGCAGTTCCCCGGC CCGACCATCTACGCGCGCAAGGGCGACCTCGTCATCGTCAACGTCCACAACAACGGGAAC AAAAACATCACCATCCACTGGCACGGCGTGGACCAGCCACGGAACCCGTGGTCGGACGGG CCGGAGTTCATCACGCAGTGCCCGATCCGGCCGGGCGGCAACTTCACCTACCAGGTGATC CTGTCCGAGGAGGAGGGCACACTGTGGTGGCACGCGCACAGTGACTTCGACCGCGCCACC GTCCACGGCGCCATCGTCATCCACCCCAAGCGCGGCACCACCTTCCCCTTCAAGAAGCCA GACAAGGAGATACCCGTCATCCTTGGTGAGTGGTGGAATGACGACATAGAGCACGTGCTC GACAAGGCGCAGCTCCTCGGCGGAGACGTGGATCCGTCCAACGCCAACACCATCAACGCC CAGCCTGGGGACATGTTCCCCTGCTCCAGGGACGACACGTTCAAAGTGGCCGTGCAGCAG GGCAACACGTACCTGCTTAGGATCATCAACGCTGGACTCACCAACGACATGTTCTTCGCC ATCGCGGGGCACCGCCTCACCGTGGTCGGGATCGACGCCCGCTACACCAAGCCGCTCACA GTCGACTACATCATGATCGCGCCTGGCCAGACCATGGACGTGCTCCTCGAGGCCAAACGC ACCTTGGGATCCAACAGCCGGTATTACATGGCCGCGAGAACGTTTATCACGTTACCGCTC GACACTATCCCTTTCAACAATAGCACTGCCACGGCTATCGTGGAGTACACGGACAGCGTC ACCGCGAGGCCGGTCGGGCCACCGGAATTCCCCGTCCAGCTGCCGGCCATCAAGGATGAG AACGCGGCGATGGCGTTCGTCACGCAGCTCAGATCATTAGGCAACCAGGAACACCCGGTG CACGTACCGACACATGTCGATGAGCACATGCTCATCGACATTGACATCAACGTTCTTCCC TGCGACCCCACCAACATGGCAGAGAAGTGCAAAGAAGGACCCCAAGGCAACCGGTTCGCG GCGAGCCTCAACAATGTTAGCTTCCAGAGCCCGGCTATCGACGTCCTCGACGCCTACTAC TATAGCTCTGGCCACGGCGTGTACGAGGAGGACTTCCCCAACAAGCCGACAGCCTTCGTC GACCCGCCCGTCAACAACGGCAGTGGGCCCTTGATGACGAAGCGTGGCACCAAGGTGAAG GTGCTGGAGTACGGCACTGTGGTAGAGGTGGTGTTTCATGACTTGTCCAGCGAGAACCAC CCTATGCATCTGCATGGCTTCGCCTTCTACGTCGTGGGACGAGGGAACGGCACCTTCGAC GAGAGCAGGGACCCGGCGACCTACAACCTCGTTGACCCGCCGTTCCAGAACACGGTCTCT GTGCCCAGGTCCGGCTGGGCCGCAATCCGCTTCCGAGCAGACAATCCAGGTGTGTGGTTC ATGCATTGCCATTTTGATCGCCACGTGGTGTGGGGGATGGACACTGTGTTCATCGTGAAG GACGGCAAGACACCGCAGGCTCAGATGCTGCCTCGTCCTCCAAACATGCCTCAGTGCTAA

Peptide Sequence

PEP ID	Os02t0749700-00
PEP Infomation	pep chromosome:IRGSP-1.0:2:31515301:31517784:-1 gene:Os02g0749700 transcript:Os02t0749700-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LACCASE 10 description:Similar to cDNA, clone: J065097H05, full insert sequence. (Os02t0749700-00)
Sequence	MGTAKLPALLWLLAGVVLALAVNPAHGAKTRHYDFFITETNYTRLCHEKSILTVNGQFPG PTIYARKGDLVIVNVHNNGNKNITIHWHGVDQPRNPWSDGPEFITQCPIRPGGNFTYQVI LSEEEGTLWWHAHSDFDRATVHGAIVIHPKRGTTFPFKKPDKEIPVILGEWWNDDIEHVL DKAQLLGGDVDPSNANTINAQPGDMFPCSRDDTFKVAVQQGNTYLLRIINAGLTNDMFFA IAGHRLTVVGIDARYTKPLTVDYIMIAPGQTMDVLLEAKRTLGSNSRYYMAARTFITLPL DTIPFNNSTATAIVEYTDSVTARPVGPPEFPVQLPAIKDENAAMAFVTQLRSLGNQEHPV HVPTHVDEHMLIDIDINVLPCDPTNMAEKCKEGPQGNRFAASLNNVSFQSPAIDVLDAYY YSSGHGVYEEDFPNKPTAFVDPPVNNGSGPLMTKRGTKVKVLEYGTVVEVVFHDLSSENH PMHLHGFAFYVVGRGNGTFDESRDPATYNLVDPPFQNTVSVPRSGWAAIRFRADNPGVWF MHCHFDRHVVWGMDTVFIVKDGKTPQAQMLPRPPNMPQC

Transcript Sequence

Transcript ID	Os02t0749700-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:31515301:31517784:-1 gene:Os02g0749700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LACCASE 10 description:Similar to cDNA, clone: J065097H05, full insert sequence. (Os02t0749700-00)
Sequence	GCAGCTTACGGCACTAGTTAGCTACTGTGCAAGAACCAAACAGTTAATCGCATACAGAAT CTCAATTAGCTCTGTGTTTCTTACCCTTGGATTGGCGATTGAATTGTGTGCGTTCGGCGA TGGGAACAGCCAAGTTACCTGCATTGCTTTGGTTACTAGCAGGCGTGGTGTTAGCACTTG CAGTTAACCCCGCTCATGGCGCCAAGACTCGCCACTACGATTTCTTCATTACGGAGACCA ACTACACGAGGCTCTGCCACGAGAAGAGCATCCTCACCGTGAACGGGCAGTTCCCCGGCC CGACCATCTACGCGCGCAAGGGCGACCTCGTCATCGTCAACGTCCACAACAACGGGAACA AAAACATCACCATCCACTGGCACGGCGTGGACCAGCCACGGAACCCGTGGTCGGACGGGC CGGAGTTCATCACGCAGTGCCCGATCCGGCCGGGCGGCAACTTCACCTACCAGGTGATCC TGTCCGAGGAGGAGGGCACACTGTGGTGGCACGCGCACAGTGACTTCGACCGCGCCACCG TCCACGGCGCCATCGTCATCCACCCCAAGCGCGGCACCACCTTCCCCTTCAAGAAGCCAG ACAAGGAGATACCCGTCATCCTTGGTGAGTGGTGGAATGACGACATAGAGCACGTGCTCG ACAAGGCGCAGCTCCTCGGCGGAGACGTGGATCCGTCCAACGCCAACACCATCAACGCCC AGCCTGGGGACATGTTCCCCTGCTCCAGGGACGACACGTTCAAAGTGGCCGTGCAGCAGG GCAACACGTACCTGCTTAGGATCATCAACGCTGGACTCACCAACGACATGTTCTTCGCCA TCGCGGGGCACCGCCTCACCGTGGTCGGGATCGACGCCCGCTACACCAAGCCGCTCACAG TCGACTACATCATGATCGCGCCTGGCCAGACCATGGACGTGCTCCTCGAGGCCAAACGCA CCTTGGGATCCAACAGCCGGTATTACATGGCCGCGAGAACGTTTATCACGTTACCGCTCG ACACTATCCCTTTCAACAATAGCACTGCCACGGCTATCGTGGAGTACACGGACAGCGTCA CCGCGAGGCCGGTCGGGCCACCGGAATTCCCCGTCCAGCTGCCGGCCATCAAGGATGAGA ACGCGGCGATGGCGTTCGTCACGCAGCTCAGATCATTAGGCAACCAGGAACACCCGGTGC ACGTACCGACACATGTCGATGAGCACATGCTCATCGACATTGACATCAACGTTCTTCCCT GCGACCCCACCAACATGGCAGAGAAGTGCAAAGAAGGACCCCAAGGCAACCGGTTCGCGG CGAGCCTCAACAATGTTAGCTTCCAGAGCCCGGCTATCGACGTCCTCGACGCCTACTACT ATAGCTCTGGCCACGGCGTGTACGAGGAGGACTTCCCCAACAAGCCGACAGCCTTCGTCG ACCCGCCCGTCAACAACGGCAGTGGGCCCTTGATGACGAAGCGTGGCACCAAGGTGAAGG TGCTGGAGTACGGCACTGTGGTAGAGGTGGTGTTTCATGACTTGTCCAGCGAGAACCACC CTATGCATCTGCATGGCTTCGCCTTCTACGTCGTGGGACGAGGGAACGGCACCTTCGACG AGAGCAGGGACCCGGCGACCTACAACCTCGTTGACCCGCCGTTCCAGAACACGGTCTCTG TGCCCAGGTCCGGCTGGGCCGCAATCCGCTTCCGAGCAGACAATCCAGGTGTGTGGTTCA TGCATTGCCATTTTGATCGCCACGTGGTGTGGGGGATGGACACTGTGTTCATCGTGAAGG ACGGCAAGACACCGCAGGCTCAGATGCTGCCTCGTCCTCCAAACATGCCTCAGTGCTAAT GACCGTGGTTCAAGGAAAATAACAAGAGCATGCATCACAAGCAAGCGGAAATTTGTTTAT TTTGTTGATTGATTTAGTGGTTTATATTTTTTCCTTGTTTCGATGAAAAGGAAGAACGCA TTCTGTCTTGACTTGTAATTGTTAGTCATTTCGTTCTGTCATGTAAGTTTGGGATTTTAT GAATATAACTAAATAATGTTTATGTAGTGGATCGTT