Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0748100-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:31432698:31437991:-1 gene:Os02g0748100 gene_biotype:protein_coding transcript_biotype:protein_coding description:RINT-1/TIP-1 family protein. (Os02t0748100-01);Hypothetical conserved gene. (Os02t0748100-02)
Sequence	ATGGAAGCGGCGGTGCTCCCGCGACCCGCGGACATCACCCCGGAGCTCCGCCGTTTCCTC GACTCCCGCTTCCGCTCGCAAGCAGACCTCGCCGCGGCCGCCGACGTCGAGGCCGAGATC CGCGGGCGCTACGCGGAGCTCGAGGCCTCGGTATCCGACCTCTCCGTCCGCCTAGCGGCC GCCGCCGCAGCTTACTCCTCCAGCTGCAGCGCCGCCGGCACCGCTCTGAGTAATGTCCGC GGCTGCCTCGCTGCCCTGAATGCCTCCACCTCTGAACCAGGGGTCACAGAAGCGGTGGAG GTTGGGAGCGAGGAGATGTTGTTTGAGCAACTTTCTTCTCTGGCCAAAGAGGTGGCGAGA GTGGAGTTGGTCAGGGATTACGCCGAAACGGCGCTAAAGCTTGACAGTTTTGTCGGCGAC GTAGAAGATGCTGTTTCATCTTCTGTGACCGGAAAACTTAAATCTCGTGCAGAAAGTTCA CTGAAAACATATCATGTTCCTATTGGATATCTTAAAACAATAGAAGATATTTTATCTTCA GTCACAAAGACCAGACCACAATGGACTCGCCTTGTTTCTGCAGTGGATCACAGAGTTGAC CGATCTTTGGCTCTACTAAGACCACAAGCAATTGTCGATCATCGAGCTCTTTTGGCATCC CTTGGCTGGCCTCCATCACTTTCTGGAACAAATTTTTCTAGTATTAATTCTGGGAAACCA TCAGAGATTGTGAACCCCTTATTTTCAATGAAGGGTGACCTGAAAAGCAAGTATTCTGAG AGCTTTCTTTCGCTATGCAGTTTGCAGGAATTGCAAAAACGTAGAAAAGCTCGACAGCTA GAAGGGCACATTGTCAACAATCAACTACGTCAACCATTATGGGTAATTGAAGAGTTAGTA AATCCAATAGCTGCTGCCGCACAACGCCATTTCTCCAAATGGGTTGAAAAGCCTGAGTTT GTTTTTGCTCTTGCTTATAAGATAACTAGAGACTTTGTAGATTCCATGGATGAGATATTA CAGCCCCTTGTGGATAAAGCTAACCTTGTAGGGTATAGTTGCAGAGAAGAGTGGATTTCT GGAATGGTCATCACATTGTCGACATACTTGGTGAAAGAGATATTTCCTAAGCATATTGAA CTTCTTCAGGAAATTAGCTCGGCTGATGCTAGCAGCAAACAATCTCAAGCTAGAGTCTCA TGGCTTAATCTTATTGACCTGATGATATCTTTCGACAAGCAAACCCAAGCTTTGATCTCA AGTTCAGGACTCCTACTTTCGGTGAAGGATGATGATAATTGGCAGAGGATCTCGGTTCTC TCCGTCTTCTGTGATCGGCCAGACTGGCTTGAAATATGGGCAGAGATTGAGAGACAGGAT ACTCATGATAAGCTGAGATTATCAATGGAGAATGAGAAAAACTGGAATACAAGGTTTCAA GGAACAGTGCTTGAATATGGTTCAGATGACTATAAGTCTCCAGCAATTACCGGTGTAATC CAAAAGGGCCTGTCCTTGCTAATAGATCGTGCTCGGCCCATTCCAAATATAGCACTTAGA GCAGAATTCATTAAGATTTCTACTTCACCTTTATTATCAGAGTTCCTTGGCTGGATGCTT CAAAGGTGCCAAGAAGCAGAGGGATTAACAGCTCTGGCAGATGATAATGCTCTTCTCAAG GTATCACAGTCCATTAATGCAGCTCGATACCTTGAGTCCACATTGACAGAATGGTGCAAT GATGTATTCTTTCTTGAGATGGAAAATATAGATGGCCGTAGCGAATGTATCTTCCAAGTG GAGATAAATCAACTGAAAGATTTTAGAGTACAATGGACTGAAAAGATTTCTACCGTCATT TTAAGGGATTTTGATGCCCGGTCAAGGGATTATCTGAAAAATAAAAGGCAGTGGCAGGAG AAATCAGAAGGGTTAACATTATCCAGGGCATTCGTAGAATGTTTAGACTACATGCAAGGA CGGATAGCTAAGCTGGAAGATGGTCTAAATGTCCTGGATTTTGTGACTGTGTGGAGAACT GTGGCAAGTGGAGTAGACCAGCTGCTCTTTTCTGGAATTTTCAGTGGCAGCACAAAGTTT AGTAATGGCGGGGTGGAAAGACTTCATGGTGATCTGAGTATATTGTTTGCTGCTTTTTCT GCGTGGTGTATGAGGCCTGAAGGCTTCTTTCCAAGACTGTCTGAGGGATTGAAGTTATTG GATATTGATGAGAAGCAGCTAAGAGATGGAGCTTGTACAGATAACAATCGGCTGAGGGAG TATGGTATAAGGCGTTTGACGGCTGCTGAGGTTGAGAAGATAATAAAAAACAGAATCTAT GAGTCGTAA

Peptide Sequence

PEP ID	Os02t0748100-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:31432698:31437991:-1 gene:Os02g0748100 transcript:Os02t0748100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:RINT-1/TIP-1 family protein. (Os02t0748100-01);Hypothetical conserved gene. (Os02t0748100-02)
Sequence	MEAAVLPRPADITPELRRFLDSRFRSQADLAAAADVEAEIRGRYAELEASVSDLSVRLAA AAAAYSSSCSAAGTALSNVRGCLAALNASTSEPGVTEAVEVGSEEMLFEQLSSLAKEVAR VELVRDYAETALKLDSFVGDVEDAVSSSVTGKLKSRAESSLKTYHVPIGYLKTIEDILSS VTKTRPQWTRLVSAVDHRVDRSLALLRPQAIVDHRALLASLGWPPSLSGTNFSSINSGKP SEIVNPLFSMKGDLKSKYSESFLSLCSLQELQKRRKARQLEGHIVNNQLRQPLWVIEELV NPIAAAAQRHFSKWVEKPEFVFALAYKITRDFVDSMDEILQPLVDKANLVGYSCREEWIS GMVITLSTYLVKEIFPKHIELLQEISSADASSKQSQARVSWLNLIDLMISFDKQTQALIS SSGLLLSVKDDDNWQRISVLSVFCDRPDWLEIWAEIERQDTHDKLRLSMENEKNWNTRFQ GTVLEYGSDDYKSPAITGVIQKGLSLLIDRARPIPNIALRAEFIKISTSPLLSEFLGWML QRCQEAEGLTALADDNALLKVSQSINAARYLESTLTEWCNDVFFLEMENIDGRSECIFQV EINQLKDFRVQWTEKISTVILRDFDARSRDYLKNKRQWQEKSEGLTLSRAFVECLDYMQG RIAKLEDGLNVLDFVTVWRTVASGVDQLLFSGIFSGSTKFSNGGVERLHGDLSILFAAFS AWCMRPEGFFPRLSEGLKLLDIDEKQLRDGACTDNNRLREYGIRRLTAAEVEKIIKNRIY ES

Transcript Sequence

Transcript ID	Os02t0748100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:31432698:31437991:-1 gene:Os02g0748100 gene_biotype:protein_coding transcript_biotype:protein_coding description:RINT-1/TIP-1 family protein. (Os02t0748100-01);Hypothetical conserved gene. (Os02t0748100-02)
Sequence	CCTTGCAAGTCGTCTTCGTCTTCCTCCTTGCCATCTCGCCCAATCTCGAGATTCTCCGCT GCTATTATCCCCGATCCAAACCCTAATCGATCCCGCCATGGAAGCGGCGGTGCTCCCGCG ACCCGCGGACATCACCCCGGAGCTCCGCCGTTTCCTCGACTCCCGCTTCCGCTCGCAAGC AGACCTCGCCGCGGCCGCCGACGTCGAGGCCGAGATCCGCGGGCGCTACGCGGAGCTCGA GGCCTCGGTATCCGACCTCTCCGTCCGCCTAGCGGCCGCCGCCGCAGCTTACTCCTCCAG CTGCAGCGCCGCCGGCACCGCTCTGAGTAATGTCCGCGGCTGCCTCGCTGCCCTGAATGC CTCCACCTCTGAACCAGGGGTCACAGAAGCGGTGGAGGTTGGGAGCGAGGAGATGTTGTT TGAGCAACTTTCTTCTCTGGCCAAAGAGGTGGCGAGAGTGGAGTTGGTCAGGGATTACGC CGAAACGGCGCTAAAGCTTGACAGTTTTGTCGGCGACGTAGAAGATGCTGTTTCATCTTC TGTGACCGGAAAACTTAAATCTCGTGCAGAAAGTTCACTGAAAACATATCATGTTCCTAT TGGATATCTTAAAACAATAGAAGATATTTTATCTTCAGTCACAAAGACCAGACCACAATG GACTCGCCTTGTTTCTGCAGTGGATCACAGAGTTGACCGATCTTTGGCTCTACTAAGACC ACAAGCAATTGTCGATCATCGAGCTCTTTTGGCATCCCTTGGCTGGCCTCCATCACTTTC TGGAACAAATTTTTCTAGTATTAATTCTGGGAAACCATCAGAGATTGTGAACCCCTTATT TTCAATGAAGGGTGACCTGAAAAGCAAGTATTCTGAGAGCTTTCTTTCGCTATGCAGTTT GCAGGAATTGCAAAAACGTAGAAAAGCTCGACAGCTAGAAGGGCACATTGTCAACAATCA ACTACGTCAACCATTATGGGTAATTGAAGAGTTAGTAAATCCAATAGCTGCTGCCGCACA ACGCCATTTCTCCAAATGGGTTGAAAAGCCTGAGTTTGTTTTTGCTCTTGCTTATAAGAT AACTAGAGACTTTGTAGATTCCATGGATGAGATATTACAGCCCCTTGTGGATAAAGCTAA CCTTGTAGGGTATAGTTGCAGAGAAGAGTGGATTTCTGGAATGGTCATCACATTGTCGAC ATACTTGGTGAAAGAGATATTTCCTAAGCATATTGAACTTCTTCAGGAAATTAGCTCGGC TGATGCTAGCAGCAAACAATCTCAAGCTAGAGTCTCATGGCTTAATCTTATTGACCTGAT GATATCTTTCGACAAGCAAACCCAAGCTTTGATCTCAAGTTCAGGACTCCTACTTTCGGT GAAGGATGATGATAATTGGCAGAGGATCTCGGTTCTCTCCGTCTTCTGTGATCGGCCAGA CTGGCTTGAAATATGGGCAGAGATTGAGAGACAGGATACTCATGATAAGCTGAGATTATC AATGGAGAATGAGAAAAACTGGAATACAAGGTTTCAAGGAACAGTGCTTGAATATGGTTC AGATGACTATAAGTCTCCAGCAATTACCGGTGTAATCCAAAAGGGCCTGTCCTTGCTAAT AGATCGTGCTCGGCCCATTCCAAATATAGCACTTAGAGCAGAATTCATTAAGATTTCTAC TTCACCTTTATTATCAGAGTTCCTTGGCTGGATGCTTCAAAGGTGCCAAGAAGCAGAGGG ATTAACAGCTCTGGCAGATGATAATGCTCTTCTCAAGGTATCACAGTCCATTAATGCAGC TCGATACCTTGAGTCCACATTGACAGAATGGTGCAATGATGTATTCTTTCTTGAGATGGA AAATATAGATGGCCGTAGCGAATGTATCTTCCAAGTGGAGATAAATCAACTGAAAGATTT TAGAGTACAATGGACTGAAAAGATTTCTACCGTCATTTTAAGGGATTTTGATGCCCGGTC AAGGGATTATCTGAAAAATAAAAGGCAGTGGCAGGAGAAATCAGAAGGGTTAACATTATC CAGGGCATTCGTAGAATGTTTAGACTACATGCAAGGACGGATAGCTAAGCTGGAAGATGG TCTAAATGTCCTGGATTTTGTGACTGTGTGGAGAACTGTGGCAAGTGGAGTAGACCAGCT GCTCTTTTCTGGAATTTTCAGTGGCAGCACAAAGTTTAGTAATGGCGGGGTGGAAAGACT TCATGGTGATCTGAGTATATTGTTTGCTGCTTTTTCTGCGTGGTGTATGAGGCCTGAAGG CTTCTTTCCAAGACTGTCTGAGGGATTGAAGTTATTGGATATTGATGAGAAGCAGCTAAG AGATGGAGCTTGTACAGATAACAATCGGCTGAGGGAGTATGGTATAAGGCGTTTGACGGC TGCTGAGGTTGAGAAGATAATAAAAAACAGAATCTATGAGTCGTAATATATATAAGGACT AAGGAATAACAGATAGCAGGGTTGAAGTTCGAAATGAGTTGTGAAAAACCATGATCACTT CGTACGGTTTTATTTCATACAAATTTTATTACTGTGCT