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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0747900-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:31423943:31425239:-1 gene:Os02g0747900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:INCREASED LEAF INCLINATION 5 description:Atypical basic helix-loop-helix protein, Control of cell elongation, Regulator of grain size and leaf angle (Os02t0747900-01)
Sequence

ATGTCGAGCAGAAGGTCGTCGCGTGGCTCCATCTCGGAGGAGGAAATCAACGAGCTCATC
TCCAAGCTCCAGTCGCTGCTCCCCAACTCACGCCGACGCGGCTCCAGCCAGGCGTCGACG
ACGAAGCTGCTGAAGGAGACGTGCAACTACATCAAGAGCCTTCACCGGGAGGTGGATGAC
CTCAGCGACCGGCTGTCCGACCTCATGGCCACCATGGATCACAACAGCCCCGGCGCGGAG
ATCATCCGCAGCATCCTCCGCTCCTGA

Peptide Sequence

PEP ID

Os02t0747900-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:31423943:31425239:-1 gene:Os02g0747900 transcript:Os02t0747900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:INCREASED LEAF INCLINATION 5 description:Atypical basic helix-loop-helix protein, Control of cell elongation, Regulator of grain size and leaf angle (Os02t0747900-01)
Sequence

MSSRRSSRGSISEEEINELISKLQSLLPNSRRRGSSQASTTKLLKETCNYIKSLHREVDD
LSDRLSDLMATMDHNSPGAEIIRSILRS

Transcript Sequence

Transcript ID

Os02t0747900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:31423943:31425239:-1 gene:Os02g0747900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:INCREASED LEAF INCLINATION 5 description:Atypical basic helix-loop-helix protein, Control of cell elongation, Regulator of grain size and leaf angle (Os02t0747900-01)
Sequence

CACACACACTTCTCCCATCCAGCTAGCTTTTGCAGATCGAGCGAACCTTCAACACAAACC
GGCCAGCTTGTTCCTCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCGGTCGCAGCCAGCTA
ACTTCGAGTGTGAAGAACACTCACGCTAGCTAGCTTTCTCAAGGCCACATACGCTAGCTC
CGCCTCCACGCGCGGCGTACGTCTAGTTTGATTGAGGCTGAAGAGAGTGCGTGTTTGGTA
GAAGAGGCTAGCTGTTGACGATGTCGAGCAGAAGGTCGTCGCGTGGCTCCATCTCGGAGG
AGGAAATCAACGAGCTCATCTCCAAGCTCCAGTCGCTGCTCCCCAACTCACGCCGACGCG
GCTCCAGCCAGGCGTCGACGACGAAGCTGCTGAAGGAGACGTGCAACTACATCAAGAGCC
TTCACCGGGAGGTGGATGACCTCAGCGACCGGCTGTCCGACCTCATGGCCACCATGGATC
ACAACAGCCCCGGCGCGGAGATCATCCGCAGCATCCTCCGCTCCTGATCGGCAAGCAGCA
GCAGCAAGCGGCACCGGCCGGCCGGCCGGCCTATGTCGACGACGAGATAGGCCGGGCCGG
CCGGGCAACGCCCGCGGCGCCAATTAATCAAGCGTACGTCCTGCCGGCGCCATTCTCCGG
CCACCAGAGAGCATTTAGCTAGGGTATATATATCTACATATATAAAATATTTATGTCGTA
TGTCCCTCCCCAAATGTACGAGCCACGCTTACACGCGCGTGTATCGATCTCTCGATCTCT
CTCTCTAAGCTCCACTCGAAGTAGGGCATTAGCACTAGGGGCCTAAGCAGAGGCTTATCC
TCGCTTTAGCTCATATTTTCATCGCTTGATGTGTCCTCTCTGAACCCCCACATCTTGTCT
TGTTTGGTTTTTCCCTCTCCCTTCCAATCTATGTAAATTTAGCTGGTGTGGTTTGGATCG
AGTTGTGTCCTCTACAGACAACCGACCGACCACTACTACCTAGAGGAAATTAATATCATC
ATGGGTGTACTGCTCCAGCTTTAACTTCAATTCAGTTGGCTACGTACTACG