Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0747600-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:31409912:31413535:-1 gene:Os02g0747600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:APETALA2/ETHYLENE-RESPONSIVE ELEMENT BINDING PROTEIN 22 description:Similar to Transcription factor AP2D8. (Os02t0747600-01)
Sequence

TCGTTGCCAGCAACTGCGGCGTGTGCGGCGACCGCCCCGGATGAGGATGGCTTGCACTCT
GCAGTGGAGTCAGGAGCTAAGGATTCGAACACCACGAAGGGAGTTGAGTCTCTTGGTACT
GGTCACAAGAAGATCCCGAAACGTGAGGTAGTTGATGAAGTTGATGTTCAGACCTGTGCC
GAAGGAAAGAACGATTCAGTGGTCCCTTCAAGCAGCAAGAACCCTATCAATGATAAGAAT
GCAAAGGCAAATGTGGCAGAGAATGGACAGTCTGCTGATGGTATCCCTGAGGATCAGAGA
GTTACTATTCTTAGTGTTGTCAAGAAGGATGAGCCTGCTGATGATGTTAGAGATTCAGTT
AATCCTGTAACAGTCGTAGGTTATAGAGATGAGAAGGGTGGAACTAGTGGTACTGCTGGA
ACTACGGCTGTGCGACCTGCAGGCACCCGGTCATCTAGTTTCCATGGTGTGACCAGGCAT
AGATGGAGTGGAAAATATGAAGCTCATCTGTGGGACAGTTCGTGCAGAATGGAAGGGCGG
AGAAGAAAGGGAAGGCAAGTTTATTTAGGAAGTTATGATACCGAGGAAAAAGCTGCCAGG
TCATATGATGTTGCAGCTCTTAAATACTGGGGCCAAAATACAAAGCTGAATTTCTCGGTT
TCAGAATACGAAAGGGAACTGGAGGACATAAGGGACATGTCTCGAGAGGAATGCGTAACA
TACCTAAGAAGAAGAAGTAGCTGCTTCTCAAGAGGGGCTTCTATTTATAGAGGAGTTACT
AGAAGGCAGAAAGATGGGAGGTGGCAGGCACGCATAGGACTGGTTGCTGGAACAAGAGAC
ATTTACCTGGGAACTTTCAAAACTGAGGAAGAAGCAGCGGAGGCTTACGACATTGCTGCT
ATTGAGATCCGTGGCAAAAATGCGGTGACCAACTTTGATCGAAGCAACTACATGGAGAAG
GGTATGCACTGTATAGAAGGGGCAGGCTTGAAGCTGCTTGCGTCTAAGCCAGAATGA

Peptide Sequence

PEP ID

Os02t0747600-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:31409912:31413535:-1 gene:Os02g0747600 transcript:Os02t0747600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:APETALA2/ETHYLENE-RESPONSIVE ELEMENT BINDING PROTEIN 22 description:Similar to Transcription factor AP2D8. (Os02t0747600-01)
Sequence

SLPATAACAATAPDEDGLHSAVESGAKDSNTTKGVESLGTGHKKIPKREVVDEVDVQTCA
EGKNDSVVPSSSKNPINDKNAKANVAENGQSADGIPEDQRVTILSVVKKDEPADDVRDSV
NPVTVVGYRDEKGGTSGTAGTTAVRPAGTRSSSFHGVTRHRWSGKYEAHLWDSSCRMEGR
RRKGRQVYLGSYDTEEKAARSYDVAALKYWGQNTKLNFSVSEYERELEDIRDMSREECVT
YLRRRSSCFSRGASIYRGVTRRQKDGRWQARIGLVAGTRDIYLGTFKTEEEAAEAYDIAA
IEIRGKNAVTNFDRSNYMEKGMHCIEGAGLKLLASKPE

Transcript Sequence

Transcript ID

Os02t0747600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:31409912:31413535:-1 gene:Os02g0747600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:APETALA2/ETHYLENE-RESPONSIVE ELEMENT BINDING PROTEIN 22 description:Similar to Transcription factor AP2D8. (Os02t0747600-01)
Sequence

TTCGTTGCCAGCAACTGCGGCGTGTGCGGCGACCGCCCCGGATGAGGATGGCTTGCACTC
TGCAGTGGAGTCAGGAGCTAAGGATTCGAACACCACGAAGGGAGTTGAGTCTCTTGGTAC
TGGTCACAAGAAGATCCCGAAACGTGAGGTAGTTGATGAAGTTGATGTTCAGACCTGTGC
CGAAGGAAAGAACGATTCAGTGGTCCCTTCAAGCAGCAAGAACCCTATCAATGATAAGAA
TGCAAAGGCAAATGTGGCAGAGAATGGACAGTCTGCTGATGGTATCCCTGAGGATCAGAG
AGTTACTATTCTTAGTGTTGTCAAGAAGGATGAGCCTGCTGATGATGTTAGAGATTCAGT
TAATCCTGTAACAGTCGTAGGTTATAGAGATGAGAAGGGTGGAACTAGTGGTACTGCTGG
AACTACGGCTGTGCGACCTGCAGGCACCCGGTCATCTAGTTTCCATGGTGTGACCAGGCA
TAGATGGAGTGGAAAATATGAAGCTCATCTGTGGGACAGTTCGTGCAGAATGGAAGGGCG
GAGAAGAAAGGGAAGGCAAGTTTATTTAGGAAGTTATGATACCGAGGAAAAAGCTGCCAG
GTCATATGATGTTGCAGCTCTTAAATACTGGGGCCAAAATACAAAGCTGAATTTCTCGGT
TTCAGAATACGAAAGGGAACTGGAGGACATAAGGGACATGTCTCGAGAGGAATGCGTAAC
ATACCTAAGAAGAAGAAGTAGCTGCTTCTCAAGAGGGGCTTCTATTTATAGAGGAGTTAC
TAGAAGGCAGAAAGATGGGAGGTGGCAGGCACGCATAGGACTGGTTGCTGGAACAAGAGA
CATTTACCTGGGAACTTTCAAAACTGAGGAAGAAGCAGCGGAGGCTTACGACATTGCTGC
TATTGAGATCCGTGGCAAAAATGCGGTGACCAACTTTGATCGAAGCAACTACATGGAGAA
GGGTATGCACTGTATAGAAGGGGCAGGCTTGAAGCTGCTTGCGTCTAAGCCAGAATGAAA
ACTTGACTTGGTGGAGCCGCATCGCATATTAGGGTTGTTTCAGTCATATTTGGAGCTTAG
TGGTACATACAGATACAACTGGTTGCAGCTTGTTAATATCTCTGCGTTATAATCTACAAA
TTACAGCTCAATTTTCGATTGACTAGCAAATTCGTCTCAGCAAGAAAGATTTTGAGCATG
TATTATAGGTTGAGTAGGGTAGATCTGTACAACACCTGAGCAACTCAATATTTATGTTCT
GCTCAATATAACCTATCATTCCAGATTGTATGTTCCCCGTTGTCATTGAAAATGACTGCA
CGTTTGTGGGGATTCTTCTGTTCAGAGTTCACATTCTCGATGAATTTCGAACATCCTGAG
CTGGCTCAAAATGTGATTCTCAAACGGTTTTGTTTGAAATCTGTTGAAATTCATTCAAAA
TTAAGGG