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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0747500-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:31407197:31409585:1 gene:Os02g0747500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to HVA22-like protein e (AtHVA22e). (Os02t0747500-01)
Sequence

ATGGGTTCCGGATCCGGATCTTTCCTCAAGGTGGTGGTAAAGAACTTGGATGTTCTTGCG
GGGCCTATAGTTTCACTTGCTTATCCACTATATGCATCTGTTCGAGCGATAGAAACAAAA
TCTGCTGTAGATGATCAGCAATGGCTCACATACTGGGTGTTGTACTCGTTTATCACTCTA
TTTGAGCTCACTTTTTCTCCGGTACTTGAATGGCTTCCTTTATGGTCTTATGCTAAATTG
TTTTTCAATTGCTGGTTGGTCTTGCCCTACTTCAATGGTGCTGCACATGTCTATGAACAC
TTTGTGAGGCCAATGGTTGTCAACCAGCAAATAGTTAATATCTGGTACATCCCAAGAAAG
GATGAGTCAGATAGACCCGATGATGTGATATCAGCTGCGCAGAGATACATTGAACAAAAT
GGATCAAGAGCGTTTGAAAGTCTGGTTAACAAGTTTAAGGCTTCAAACACAAGGCGCTCC
ATTCTGGAGGAGGTAGAGGCTGAAAGAAGAGCCAAGGCTGAACTAGAAGCAGAAGCAAGG
GATGAGAATCCTTTCTTCAATCAAAATTATCGGTACTAG

Peptide Sequence

PEP ID

Os02t0747500-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:31407197:31409585:1 gene:Os02g0747500 transcript:Os02t0747500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to HVA22-like protein e (AtHVA22e). (Os02t0747500-01)
Sequence

MGSGSGSFLKVVVKNLDVLAGPIVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITL
FELTFSPVLEWLPLWSYAKLFFNCWLVLPYFNGAAHVYEHFVRPMVVNQQIVNIWYIPRK
DESDRPDDVISAAQRYIEQNGSRAFESLVNKFKASNTRRSILEEVEAERRAKAELEAEAR
DENPFFNQNYRY

Transcript Sequence

Transcript ID

Os02t0747500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:31407197:31409585:1 gene:Os02g0747500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to HVA22-like protein e (AtHVA22e). (Os02t0747500-01)
Sequence

AAAGGGTGAAGAAACCAAATAAGAAAAAGATAAAAAGGGGAAAAGGTCGCCCAGCGGCTG
AAACCGACCTGCATTGCTCCTCGCTGCTTTGGATTCGCACTTCGCAGCTTGAGACCGGGA
GCAGGACGAGCGGCGGAATGGGTTCCGGATCCGGATCTTTCCTCAAGGTGGTGGTAAAGA
ACTTGGATGTTCTTGCGGGGCCTATAGTTTCACTTGCTTATCCACTATATGCATCTGTTC
GAGCGATAGAAACAAAATCTGCTGTAGATGATCAGCAATGGCTCACATACTGGGTGTTGT
ACTCGTTTATCACTCTATTTGAGCTCACTTTTTCTCCGGTACTTGAATGGCTTCCTTTAT
GGTCTTATGCTAAATTGTTTTTCAATTGCTGGTTGGTCTTGCCCTACTTCAATGGTGCTG
CACATGTCTATGAACACTTTGTGAGGCCAATGGTTGTCAACCAGCAAATAGTTAATATCT
GGTACATCCCAAGAAAGGATGAGTCAGATAGACCCGATGATGTGATATCAGCTGCGCAGA
GATACATTGAACAAAATGGATCAAGAGCGTTTGAAAGTCTGGTTAACAAGTTTAAGGCTT
CAAACACAAGGCGCTCCATTCTGGAGGAGGTAGAGGCTGAAAGAAGAGCCAAGGCTGAAC
TAGAAGCAGAAGCAAGGGATGAGAATCCTTTCTTCAATCAAAATTATCGGTACTAGAAGT
CAGGGTTCATAGGATCAAATTTATGCTCATGGGGTATGTGTTCAAACGATCATGGATTAG
TGTAAATAGGTTCTAGGATTCGAGTATTCTTGCTACTCTTGTTGATGCAGGGTTCTTGCC
ATGAAGTAATAAATACTAGTGAACTAGATTTGGCTTCTATCATATGAAAATGCTAGAATG
AACAACAGCATCTGCAGACAACTGATTTGGG