Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0745100-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:31266328:31269935:1 gene:Os02g0745100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LOW SILICON RICE 1 description:Aquaporin NIP III subfamily protein, Aquaporin, Silicon influx transporter, Arsenic species (As) uptake, Arsenite efflux, Selenite (Se) uptake, Water transport (Os02t0745100-01)
Sequence	ATGGCCAGCAACAACTCGAGAACAAACTCCAGGGCGAACTACTCCAACGAGATCCACGAT CTCTCCACGGTGCAGAACGGCACCATGCCTACCATGTACTACGGCGAGAAGGCCATCGCC GACTTCTTCCCTCCTCACCTCCTCAAGAAGGTCGTGTCGGAGGTGGTGGCCACGTTCCTG CTGGTGTTCATGACGTGTGGGGCGGCAGGGATCAGCGGCAGCGACCTGTCTCGCATATCG CAGCTGGGACAGTCGATCGCCGGTGGCCTCATCGTGACGGTGATGATCTACGCCGTCGGC CACATCTCCGGCGCCCACATGAACCCCGCCGTGACGCTCGCGTTCGCCGTGTTCAGGCAT TTCCCCTGGATTCAGGTTCCGTTCTACTGGGCGGCGCAGTTCACCGGAGCGATATGCGCG TCGTTCGTGCTCAAGGCGGTGATCCACCCGGTGGATGTGATCGGAACCACCACGCCCGTG GGGCCGCACTGGCACTCGCTCGTCGTCGAGGTCATCGTGACGTTCAACATGATGTTCGTC ACGCTCGCCGTCGCCACGGACACGAGAGCGGTGGGTGAGTTGGCCGGGTTGGCGGTTGGT TCCGCGGTTTGCATTACGTCCATCTTCGCAGGGGCAATTTCAGGTGGATCGATGAACCCG GCAAGGACGCTGGGGCCGGCGCTGGCGAGCAACAAGTTCGACGGCCTGTGGATCTACTTC CTGGGCCCAGTCATGGGCACGCTCTCGGGAGCATGGACCTACACCTTCATCCGCTTCGAG GACACCCCCAAGGAAGGCTCCTCCCAGAAGCTCTCCTCCTTCAAGCTGCGCCGCTTGCGG AGCCAGCAGTCCATCGCCGCCGACGACGTCGACGAGATGGAGAACATCCAAGTGTGA

Peptide Sequence

PEP ID	Os02t0745100-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:31266328:31269935:1 gene:Os02g0745100 transcript:Os02t0745100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LOW SILICON RICE 1 description:Aquaporin NIP III subfamily protein, Aquaporin, Silicon influx transporter, Arsenic species (As) uptake, Arsenite efflux, Selenite (Se) uptake, Water transport (Os02t0745100-01)
Sequence	MASNNSRTNSRANYSNEIHDLSTVQNGTMPTMYYGEKAIADFFPPHLLKKVVSEVVATFL LVFMTCGAAGISGSDLSRISQLGQSIAGGLIVTVMIYAVGHISGAHMNPAVTLAFAVFRH FPWIQVPFYWAAQFTGAICASFVLKAVIHPVDVIGTTTPVGPHWHSLVVEVIVTFNMMFV TLAVATDTRAVGELAGLAVGSAVCITSIFAGAISGGSMNPARTLGPALASNKFDGLWIYF LGPVMGTLSGAWTYTFIRFEDTPKEGSSQKLSSFKLRRLRSQQSIAADDVDEMENIQV

Transcript Sequence

Transcript ID	Os02t0745100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:31266328:31269935:1 gene:Os02g0745100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LOW SILICON RICE 1 description:Aquaporin NIP III subfamily protein, Aquaporin, Silicon influx transporter, Arsenic species (As) uptake, Arsenite efflux, Selenite (Se) uptake, Water transport (Os02t0745100-01)
Sequence	GATCGACGGAGCGAGCGAGCTAGCCAGCCAGTGTTAGAGCTTGAGCTGCTTGTTCTTCTT CTACCTCCTGCACTCGCGTGCTGCACAAGTAGCTCAGCTAGATAGAGCGTCAGAAATGGC CAGCAACAACTCGAGAACAAACTCCAGGGCGAACTACTCCAACGAGATCCACGATCTCTC CACGGTGCAGAACGGCACCATGCCTACCATGTACTACGGCGAGAAGGCCATCGCCGACTT CTTCCCTCCTCACCTCCTCAAGAAGGTCGTGTCGGAGGTGGTGGCCACGTTCCTGCTGGT GTTCATGACGTGTGGGGCGGCAGGGATCAGCGGCAGCGACCTGTCTCGCATATCGCAGCT GGGACAGTCGATCGCCGGTGGCCTCATCGTGACGGTGATGATCTACGCCGTCGGCCACAT CTCCGGCGCCCACATGAACCCCGCCGTGACGCTCGCGTTCGCCGTGTTCAGGCATTTCCC CTGGATTCAGGTTCCGTTCTACTGGGCGGCGCAGTTCACCGGAGCGATATGCGCGTCGTT CGTGCTCAAGGCGGTGATCCACCCGGTGGATGTGATCGGAACCACCACGCCCGTGGGGCC GCACTGGCACTCGCTCGTCGTCGAGGTCATCGTGACGTTCAACATGATGTTCGTCACGCT CGCCGTCGCCACGGACACGAGAGCGGTGGGTGAGTTGGCCGGGTTGGCGGTTGGTTCCGC GGTTTGCATTACGTCCATCTTCGCAGGGGCAATTTCAGGTGGATCGATGAACCCGGCAAG GACGCTGGGGCCGGCGCTGGCGAGCAACAAGTTCGACGGCCTGTGGATCTACTTCCTGGG CCCAGTCATGGGCACGCTCTCGGGAGCATGGACCTACACCTTCATCCGCTTCGAGGACAC CCCCAAGGAAGGCTCCTCCCAGAAGCTCTCCTCCTTCAAGCTGCGCCGCTTGCGGAGCCA GCAGTCCATCGCCGCCGACGACGTCGACGAGATGGAGAACATCCAAGTGTGATAGGACGA CGAGATGTCGTCGATCGTGTCCTCTTACTCGGAAAATTACCAGTCGATCTCGGTCTCGTC ATCACTAGCTACGTCTTTGTGTGTGTTTTGTGTCGTGTCACTGCTGCTTCGTACACGCCG GAGAGAGTTACATAAAACGCGCGCGCGTGCACGGGGGAGTGGCGCTAGCTTTGGTTGCTT GGTGGTTCGTGTGGGGTACGTAGATTGCTCGCTCTGTTAATTCCGGGGCTGGAGCCTGCT AATTTTGGGCGTGTGCGTGTGCCGCTTGTGCATCAGTCTCTGCCGTCAAATTGTGCGTGT GTGCCAGGTGTACTATCTCTCCAGCAGTTGCTTGTTCCACTTCAATTCACCCCCAAAGTA ATTAAAAGGATGTCACGTTCTCTCCCCT