Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0743800-02
CDS Infomation

cds chromosome:IRGSP-1.0:2:31194269:31197697:-1 gene:Os02g0743800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os02t0743800-01);CS domain containing protein. (Os02t0743800-02)
Sequence

ATGGTGGTCACCATCGATCTCCGGGAGGTCACCATCGATCTCCGGGAGGAGGACGAGGCG
GCGGCGGCGGCGGCGATGAAGGCCATCGCTGGGAGGAGCGACGAGGAGGTCCTCGCGGCG
GTGCTCGCGCGCAAGGGTGGCCCTGTCCCGTTCCTCCAGGCGGCGATCGACGCCGCGGCG
GCGGCGGCGACGAAGGCCATCGCTGGGAGGAGCGACGAGGAGGTCCTCGCAGCGGTGCTC
GCGCGCAAGGGTGGCCCTGTCCCGTTCCTCCAGGCGGCGATCGACGTCGCGCAGCGGCGA
TCCGACCTGTTCCTCGACCCCTCCGCACCGGGGGTGGTGGCGGAGATGGCGGTGGAAGCC
CAGGCCAAGGCGGAGGCGGAGGAGAGGCGGAAGAGGGCGAAGGGGGAGCCGAGGAAGGCG
GAGGAGATGCTGAAGGAGGAGGAGCCGATGAAGGCGGAGGAGATGCTGAAGGAGGAGGAG
CCGATGAAGGCGGAGGAGATGCTGAAGGAGGAGCCGAGGACGCCGATGAGAGAGGCGGGG
AGGGACAAGGTGGAGAGGGCAGCGGTAGTGGAGCGCGTAAGAGACCCTAAGCCTAATGCT
GGAAATGGTCTGGACTTGGAGAAATATTCCTGGACTCAGGAAAGGCCAGAGGTTACCATA
ACCATTCCAGTTCCCCAAGGAACAAAATCAAGTCTTGTCACTTATGAGATTATGAAGAAC
CATCTGAAGGTTGGACTGAAGGGTTGCTCTTTTATAATTGATGGGGAGCTTTTTGAGCCA
GTTAAAGTTAATGACTGCTTGTGGACCATTGAGGATGGGAATACACTGTCTATACTTTTG
ACAAAGGAAAACCAGAAGGAATGGTGGACATCAGTGATAAAAGGTGACCCTGAACTTGAC
CCCCGCGACATGAAAGTACCTGAACTCCGTGATTGTGATGTTGAGGCCAAAGAGACTATT
GTGAGGATACTAAGTCATGGATTGCCCAAGAGAGCTATGGATCCTGCAACAAGTGATGAT
ATCCAGCAAGAGGAACTTCTGAAGAATGCCCAGTACTCGCATATGGATTCCTAA

Peptide Sequence

PEP ID

Os02t0743800-02
PEP Infomation

pep chromosome:IRGSP-1.0:2:31194269:31197697:-1 gene:Os02g0743800 transcript:Os02t0743800-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os02t0743800-01);CS domain containing protein. (Os02t0743800-02)
Sequence

MVVTIDLREVTIDLREEDEAAAAAAMKAIAGRSDEEVLAAVLARKGGPVPFLQAAIDAAA
AAATKAIAGRSDEEVLAAVLARKGGPVPFLQAAIDVAQRRSDLFLDPSAPGVVAEMAVEA
QAKAEAEERRKRAKGEPRKAEEMLKEEEPMKAEEMLKEEEPMKAEEMLKEEPRTPMREAG
RDKVERAAVVERVRDPKPNAGNGLDLEKYSWTQERPEVTITIPVPQGTKSSLVTYEIMKN
HLKVGLKGCSFIIDGELFEPVKVNDCLWTIEDGNTLSILLTKENQKEWWTSVIKGDPELD
PRDMKVPELRDCDVEAKETIVRILSHGLPKRAMDPATSDDIQQEELLKNAQYSHMDS

Transcript Sequence

Transcript ID

Os02t0743800-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:31194269:31197697:-1 gene:Os02g0743800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os02t0743800-01);CS domain containing protein. (Os02t0743800-02)
Sequence

AATCCAATCCAACGCTTCCTTCCTCGCAAAGCCTCTGCGAATCTCGCGCACGCAGAAACC
GCTCCCAAACCCTAGACGCAATGGTGGTCACCATCGATCTCCGGGAGGTCACCATCGATC
TCCGGGAGGAGGACGAGGCGGCGGCGGCGGCGGCGATGAAGGCCATCGCTGGGAGGAGCG
ACGAGGAGGTCCTCGCGGCGGTGCTCGCGCGCAAGGGTGGCCCTGTCCCGTTCCTCCAGG
CGGCGATCGACGCCGCGGCGGCGGCGGCGACGAAGGCCATCGCTGGGAGGAGCGACGAGG
AGGTCCTCGCAGCGGTGCTCGCGCGCAAGGGTGGCCCTGTCCCGTTCCTCCAGGCGGCGA
TCGACGTCGCGCAGCGGCGATCCGACCTGTTCCTCGACCCCTCCGCACCGGGGGTGGTGG
CGGAGATGGCGGTGGAAGCCCAGGCCAAGGCGGAGGCGGAGGAGAGGCGGAAGAGGGCGA
AGGGGGAGCCGAGGAAGGCGGAGGAGATGCTGAAGGAGGAGGAGCCGATGAAGGCGGAGG
AGATGCTGAAGGAGGAGGAGCCGATGAAGGCGGAGGAGATGCTGAAGGAGGAGCCGAGGA
CGCCGATGAGAGAGGCGGGGAGGGACAAGGTGGAGAGGGCAGCGGTAGTGGAGCGCGTAA
GAGACCCTAAGCCTAATGCTGGAAATGGTCTGGACTTGGAGAAATATTCCTGGACTCAGG
AAAGGCCAGAGGTTACCATAACCATTCCAGTTCCCCAAGGAACAAAATCAAGTCTTGTCA
CTTATGAGATTATGAAGAACCATCTGAAGGTTGGACTGAAGGGTTGCTCTTTTATAATTG
ATGGGGAGCTTTTTGAGCCAGTTAAAGTTAATGACTGCTTGTGGACCATTGAGGATGGGA
ATACACTGTCTATACTTTTGACAAAGGAAAACCAGAAGGAATGGTGGACATCAGTGATAA
AAGGTGACCCTGAACTTGACCCCCGCGACATGAAAGTACCTGAACTCCGTGATTGTGATG
TTGAGGCCAAAGAGACTATTGTGAGGATACTAAGTCATGGATTGCCCAAGAGAGCTATGG
ATCCTGCAACAAGTGATGATATCCAGCAAGAGGAACTTCTGAAGAATGCCCAGTACTCGC
ATATGGATTCCTAAGGCAAAAATTGAGGATGTTGAACCCAAGAAGTGTACATACATCATC
CTTTGACAGAGAATAGAAGTTCAGACACAGAACAGAAGGTCACATCATCTTTTTTGTACC
GGGTTAGGAAGCTCAAATACTGAAGACTTCTCTGCTAGTACGATTTAGCTCTATGGTAAC
TAGTAATCCTCGAATCATAGCCTGGTAGTCACACAATGTTAGTCTATAAACATGAAGCTG
CACCTATTCAGAAACCTTCCTCTTAAACACCTTATCCTGTATCTACTCAGCAGTAACATG
GTCGAGATTTTGTGCTCTAAGCTCTGGTGGTTGTGCAAATGGATATCGGCATCTACAAAG
CAAATGCAGTTCCTCTCT