Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0741800-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:31046264:31051689:-1 gene:Os02g0741800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Permease 1. (Os02t0741800-01)
Sequence

ATGGCCGGAGGAGGTGGGGGAGGGGGAGGGGCGGCGCCGGCGCCGAAGCACGACGAGCTG
ACGCCGCACCCCGTCAAGGACCAGCTCCCCGGCGTCTCCTACTGCATCACCAGCCCTCCT
CCGTGGCCTGAGGCCATTCTTCTTGGTTTCCAACATTATCTGGTTATGCTGGGAACTACA
GTTATCATACCAACTGCACTCGTTCCGCAGATGGGAGGAAACAATGAGGACAAGGCTGTT
GTTATCCAAACATTGCTGTTTGTGGCTGGGATTAACACCCTTTTGCAGAGTTTCTTTGGA
ACCAGATTACCTGCGGTGATTGGTGGATCATACACATTTGTTGTACCAACCATCTCAATC
ATCCTTGCTGGTCGTTATGCCAACGAACCAAATCCACACACAAAATTCCTCCGAATCATG
CGTGGAACACAAGGTGCATTGATCGTGGCTTCTGCTCTACAAATCATATTTGGTTTCAGT
GGCCTTTGGCGTAATGTTGCAAGGTATCTGAGTCCATTGTCAGCTGCTCCACTGGTGATG
CTAGTCGGCTTTGGACTTTATGAGCTTGGTTTTCCCTCGGTTGCCAAGTGTGTTGAGATT
GGTCTTCCAGAACTTATCCTCCTGGTGATCTTCGCAATGTACCTGCCTCATGCTATACAC
ATGATGAAGTCTATCTTCGACCGTTTTGCTGTTCTGTTCACTATTCCTATAGTGTGGCTC
TATGCATATCTGCTCACAGTTGGAGGCGCGTACAGGAATGCACCACCAAAGACCCAGTTT
CATTGCCGAACTGACCGTTCTGGAATAATTGGTGGTGCTCCTTGGATAAGAGTTCCCTAT
CCCTTTCAATGGGGTGCTCCAACTTTTGATGCTGGTGAAGCTTTTGCAATGATGGCTGCT
TCATTTGTTGCTCTGGTGGAGTCTACTGGTGCTTTCATTGCTGTTTCAAGGTATGCTAGT
GCCACACCTCTCCCACCCTCTGTACTTAGCCGTGGAATTGGTTGGCAGGGCATTGGCATT
TTGTTGGATGGGCTATTTGGGACTGGAAATGGTTCTTCTGTATCAGTTGAAAATGCTGGA
TTGCTAGCTTTGACACGTGTTGGTAGCCGAAGAGTGGTGCAGATATCAGCTGGTTTCATG
ATATTCTTCTCTATTCTGGGAAAATTTGGAGCTGTCTTTGCATCAATACCTCCGCCGATC
TTTGCAGCTCTCTATTGTATCTTCTTTGCATATGTCGGTTCTGCTGGGGTTGGTTTCCTT
CAGTTCTGCAATCTCAATAGTTTCAGGACCAAGTTCATCCTCGGGTTCTCAGTTTTTATG
GGCCTTTCTGTTCCTCAGTACTTCAACGAGTACACATCTGTTGCTGGTTATGGTCCTGTT
CATACACACTCAAGATGGTTCAATGACATCGTGAATGTCATATTCTCGTCAAAGGCATTC
GTTGCTGGCTTTGTTGCATATTTGCTGGACAACACGATTCACAGGCATGATAGTTCTGTC
AGAAAAGATCGAGGACACCATTGGTGGGATAAATTCCGATCATACAGGACTGACACAAGA
AGCGAGGAGTTCTATTCCCTGCCGTTCAACCTGAACAAGTTCTTCCCATCAGTATGA

Peptide Sequence

PEP ID

Os02t0741800-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:31046264:31051689:-1 gene:Os02g0741800 transcript:Os02t0741800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Permease 1. (Os02t0741800-01)
Sequence

MAGGGGGGGGAAPAPKHDELTPHPVKDQLPGVSYCITSPPPWPEAILLGFQHYLVMLGTT
VIIPTALVPQMGGNNEDKAVVIQTLLFVAGINTLLQSFFGTRLPAVIGGSYTFVVPTISI
ILAGRYANEPNPHTKFLRIMRGTQGALIVASALQIIFGFSGLWRNVARYLSPLSAAPLVM
LVGFGLYELGFPSVAKCVEIGLPELILLVIFAMYLPHAIHMMKSIFDRFAVLFTIPIVWL
YAYLLTVGGAYRNAPPKTQFHCRTDRSGIIGGAPWIRVPYPFQWGAPTFDAGEAFAMMAA
SFVALVESTGAFIAVSRYASATPLPPSVLSRGIGWQGIGILLDGLFGTGNGSSVSVENAG
LLALTRVGSRRVVQISAGFMIFFSILGKFGAVFASIPPPIFAALYCIFFAYVGSAGVGFL
QFCNLNSFRTKFILGFSVFMGLSVPQYFNEYTSVAGYGPVHTHSRWFNDIVNVIFSSKAF
VAGFVAYLLDNTIHRHDSSVRKDRGHHWWDKFRSYRTDTRSEEFYSLPFNLNKFFPSV

Transcript Sequence

Transcript ID

Os02t0741800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:31046264:31051689:-1 gene:Os02g0741800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Permease 1. (Os02t0741800-01)
Sequence

GCCACCCGCTGCGGCAAGCGCTTTTTTGACCGCTTCTGCCGTCTCCCTCCTCACACGGCA
CCCGGCTCGCGTCTCTCCTCCCCCCTACTACTCTGATCCACCGGGTAGTACTAGACGCGC
TACTACTGCCGCTGTACTGCTCTGCCACCACTTCTCCACTCCACTCCACTCTCCTCTACT
ACCACCGCCGCTCTCGTCTCGTCTCGTCTCGACTCGACTCGCATTGCGCCTGTGCTGTGC
TGTGGTGGTGGCCGCGCGGGGGGCGAGATGGCCGGAGGAGGTGGGGGAGGGGGAGGGGCG
GCGCCGGCGCCGAAGCACGACGAGCTGACGCCGCACCCCGTCAAGGACCAGCTCCCCGGC
GTCTCCTACTGCATCACCAGCCCTCCTCCGTGGCCTGAGGCCATTCTTCTTGGTTTCCAA
CATTATCTGGTTATGCTGGGAACTACAGTTATCATACCAACTGCACTCGTTCCGCAGATG
GGAGGAAACAATGAGGACAAGGCTGTTGTTATCCAAACATTGCTGTTTGTGGCTGGGATT
AACACCCTTTTGCAGAGTTTCTTTGGAACCAGATTACCTGCGGTGATTGGTGGATCATAC
ACATTTGTTGTACCAACCATCTCAATCATCCTTGCTGGTCGTTATGCCAACGAACCAAAT
CCACACACAAAATTCCTCCGAATCATGCGTGGAACACAAGGTGCATTGATCGTGGCTTCT
GCTCTACAAATCATATTTGGTTTCAGTGGCCTTTGGCGTAATGTTGCAAGGTATCTGAGT
CCATTGTCAGCTGCTCCACTGGTGATGCTAGTCGGCTTTGGACTTTATGAGCTTGGTTTT
CCCTCGGTTGCCAAGTGTGTTGAGATTGGTCTTCCAGAACTTATCCTCCTGGTGATCTTC
GCAATGTACCTGCCTCATGCTATACACATGATGAAGTCTATCTTCGACCGTTTTGCTGTT
CTGTTCACTATTCCTATAGTGTGGCTCTATGCATATCTGCTCACAGTTGGAGGCGCGTAC
AGGAATGCACCACCAAAGACCCAGTTTCATTGCCGAACTGACCGTTCTGGAATAATTGGT
GGTGCTCCTTGGATAAGAGTTCCCTATCCCTTTCAATGGGGTGCTCCAACTTTTGATGCT
GGTGAAGCTTTTGCAATGATGGCTGCTTCATTTGTTGCTCTGGTGGAGTCTACTGGTGCT
TTCATTGCTGTTTCAAGGTATGCTAGTGCCACACCTCTCCCACCCTCTGTACTTAGCCGT
GGAATTGGTTGGCAGGGCATTGGCATTTTGTTGGATGGGCTATTTGGGACTGGAAATGGT
TCTTCTGTATCAGTTGAAAATGCTGGATTGCTAGCTTTGACACGTGTTGGTAGCCGAAGA
GTGGTGCAGATATCAGCTGGTTTCATGATATTCTTCTCTATTCTGGGAAAATTTGGAGCT
GTCTTTGCATCAATACCTCCGCCGATCTTTGCAGCTCTCTATTGTATCTTCTTTGCATAT
GTCGGTTCTGCTGGGGTTGGTTTCCTTCAGTTCTGCAATCTCAATAGTTTCAGGACCAAG
TTCATCCTCGGGTTCTCAGTTTTTATGGGCCTTTCTGTTCCTCAGTACTTCAACGAGTAC
ACATCTGTTGCTGGTTATGGTCCTGTTCATACACACTCAAGATGGTTCAATGACATCGTG
AATGTCATATTCTCGTCAAAGGCATTCGTTGCTGGCTTTGTTGCATATTTGCTGGACAAC
ACGATTCACAGGCATGATAGTTCTGTCAGAAAAGATCGAGGACACCATTGGTGGGATAAA
TTCCGATCATACAGGACTGACACAAGAAGCGAGGAGTTCTATTCCCTGCCGTTCAACCTG
AACAAGTTCTTCCCATCAGTATGAGCATACCGTGGCTAATGCAAGAGTAGGTTACTGTGT
ACTGTCTGTCCCTTATGAACAGGTTCCCTGGAAGTGGCAAACTGTTGGCCTGAATTCTCT
AGGTATGTGGAAATCGTAGACCTTTAAACAAAAGGGAATCCTGTGGTATGAACAAAAAAA
TATTGGTGGAATTATGGCACGGATGTATATTTTAACCTATCTGGGGGCAATAGTAGGAAA
TTTTGGCTACTCATTTGCACATG