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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0740700-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:30980995:30982317:-1 gene:Os02g0740700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase M10A and M12B, matrixin and adamalysin family protein. (Os02t0740700-01)
Sequence

ATGGGCGCCTCCACCTCGCCTCGTCTCGCCTTGCTAGTAGTGGTCGCGGCGGCGGCGTTC
GTCTTCGTCTCGCCGGCGATGGCTTTCCCGATGGGATTGCCGGCGACGGCGAACCCGTTC
CCGAACCCGTGGTCCGCTTTCCAGAACCTCTCTGGGTGCCACGCCGGCGAGGAGAGGGAG
GGGCTAGGGAGGCTCAAGGATTACCTCAGCCACTTCGGCTACCTCCCGCCGCCGCCGTCG
TCGTCGCCGTACAGCGACGCGTTCGACGACTCCCTGGAGGCCGCCATCGCCGCGTACCAG
CGCAACTTCGGCCTCAACGCGACGGGGGAGCTGGACACGGACACCGTGGACCAGATGGTC
GCCCCGCGCTGCGGCGTCGCCGACGTCATCAACGGGACATCCACCATGGACAGGAACTCG
TCGGCGGCCGCCCTCCGCGGCCGCCACCTGTACAGCTACTTCCCCGGCGGGCCGATGTGG
CCGCCGTTCCGCCGCAACCTCAGGTACGCGATCACCGCGACGTCCGCGACGTCCATCGAC
AGGGCGACGCTGAGCGCCGTGTTCGCGCGGGCCTTCTCCCGGTGGGCCGCCGCCACGAGG
CTGCAGTTCACGGAGGTGTCCTCGGCGTCGAACGCCGACATCACGATCGGGTTCTACTCC
GGCGACCACGGGGACGGCGAGGCGTTCGACGGGCCACTGGGCACGCTGGCGCACGCGTTC
TCGCCGACGGACGGGCGGTTCCACCTGGACGCCGCGGAGGCGTGGGTGGCCAGCGGCGAC
GTGTCCACCTCGTCGTCGTTCGGCACGGCGGTGGACCTGGAGTCCGTGGCGGTGCACGAG
ATCGGGCACCTGCTGGGGCTCGGCCACTCGTCGGTGCCGGACTCCATCATGTACCCGACG
ATCCGCACGGGGACGAGGAAGGTGGACCTGGAGTCCGACGACGTCCTGGGGATACAGAGC
CTGTACGGGACCAACCCAAACTTCAAGGGCGTCACGCCGACGTCGCCGTCGACGAGCAGC
CGGGAGATGGACGGCAGCGCGGCCGCCGCCGGCATCCGGCCGTGGAGTGGGTTCGTTGGA
TTAGTTGTGCCGGCAGTTGTCCTGCTCTTAGCTCCGTAG

Peptide Sequence

PEP ID

Os02t0740700-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:30980995:30982317:-1 gene:Os02g0740700 transcript:Os02t0740700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase M10A and M12B, matrixin and adamalysin family protein. (Os02t0740700-01)
Sequence

MGASTSPRLALLVVVAAAAFVFVSPAMAFPMGLPATANPFPNPWSAFQNLSGCHAGEERE
GLGRLKDYLSHFGYLPPPPSSSPYSDAFDDSLEAAIAAYQRNFGLNATGELDTDTVDQMV
APRCGVADVINGTSTMDRNSSAAALRGRHLYSYFPGGPMWPPFRRNLRYAITATSATSID
RATLSAVFARAFSRWAAATRLQFTEVSSASNADITIGFYSGDHGDGEAFDGPLGTLAHAF
SPTDGRFHLDAAEAWVASGDVSTSSSFGTAVDLESVAVHEIGHLLGLGHSSVPDSIMYPT
IRTGTRKVDLESDDVLGIQSLYGTNPNFKGVTPTSPSTSSREMDGSAAAAGIRPWSGFVG
LVVPAVVLLLAP

Transcript Sequence

Transcript ID

Os02t0740700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:30980995:30982317:-1 gene:Os02g0740700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase M10A and M12B, matrixin and adamalysin family protein. (Os02t0740700-01)
Sequence

CACCGATCGCACCACGTCTCCGTCTGTTTGCGGCTCAAGGTTTCAGCGATGGGCGCCTCC
ACCTCGCCTCGTCTCGCCTTGCTAGTAGTGGTCGCGGCGGCGGCGTTCGTCTTCGTCTCG
CCGGCGATGGCTTTCCCGATGGGATTGCCGGCGACGGCGAACCCGTTCCCGAACCCGTGG
TCCGCTTTCCAGAACCTCTCTGGGTGCCACGCCGGCGAGGAGAGGGAGGGGCTAGGGAGG
CTCAAGGATTACCTCAGCCACTTCGGCTACCTCCCGCCGCCGCCGTCGTCGTCGCCGTAC
AGCGACGCGTTCGACGACTCCCTGGAGGCCGCCATCGCCGCGTACCAGCGCAACTTCGGC
CTCAACGCGACGGGGGAGCTGGACACGGACACCGTGGACCAGATGGTCGCCCCGCGCTGC
GGCGTCGCCGACGTCATCAACGGGACATCCACCATGGACAGGAACTCGTCGGCGGCCGCC
CTCCGCGGCCGCCACCTGTACAGCTACTTCCCCGGCGGGCCGATGTGGCCGCCGTTCCGC
CGCAACCTCAGGTACGCGATCACCGCGACGTCCGCGACGTCCATCGACAGGGCGACGCTG
AGCGCCGTGTTCGCGCGGGCCTTCTCCCGGTGGGCCGCCGCCACGAGGCTGCAGTTCACG
GAGGTGTCCTCGGCGTCGAACGCCGACATCACGATCGGGTTCTACTCCGGCGACCACGGG
GACGGCGAGGCGTTCGACGGGCCACTGGGCACGCTGGCGCACGCGTTCTCGCCGACGGAC
GGGCGGTTCCACCTGGACGCCGCGGAGGCGTGGGTGGCCAGCGGCGACGTGTCCACCTCG
TCGTCGTTCGGCACGGCGGTGGACCTGGAGTCCGTGGCGGTGCACGAGATCGGGCACCTG
CTGGGGCTCGGCCACTCGTCGGTGCCGGACTCCATCATGTACCCGACGATCCGCACGGGG
ACGAGGAAGGTGGACCTGGAGTCCGACGACGTCCTGGGGATACAGAGCCTGTACGGGACC
AACCCAAACTTCAAGGGCGTCACGCCGACGTCGCCGTCGACGAGCAGCCGGGAGATGGAC
GGCAGCGCGGCCGCCGCCGGCATCCGGCCGTGGAGTGGGTTCGTTGGATTAGTTGTGCCG
GCAGTTGTCCTGCTCTTAGCTCCGTAGACTTTCTAGTCCATTTTTCGTGCCTCGGTGTTG
CCACGTCCATCTCTGGTTCTATTTCTTGTACGATAGATTATTGTTGACTTTTGGACAGAT
TCTTGTGTACATAACATTACTGAAGAATTATAGATATCAATATCATACATATTTTTTTGA
TAG