Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0739900-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:30930149:30934255:-1 gene:Os02g0739900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to microtubule-associated protein TORTIFOLIA1. (Os02t0739900-01)
Sequence	ATGGGCACGGCGGGGCGGGCGCGCGGCGGCGAGCCGCTGAAGCTGCGGGTGAACAGGTGC CTCCTCAAGCTGTCGGACCGCGACACGGAGGCCATGGCGGCCGCGGAGCTGGAGGCCATC GCGCGGGCGCTGGCCGCGGACGAGCTCGGGGCGTTCGTCTCGGCGGTGTCCGACGCGCGC CCCACCGACAAGACCCCGCTCCGCCGCCACGCGCTGCGGGCGCTCGCGCTCGTCGCCGCG GCGCACCCGCGCGACGCCGTGGCGCCGCTCGTCCCGCGCATCCTCGCCGCCGCACTCCGC CGCGTCCGGGACCAGGACTCCTCCGTGCGCGCCGCGCTCGTCGACACCGCGCGCGCGGCG GCGGCCGCGTCCGCCTCCGCCTCCCCGGCGCTCCGACCCCTCACCGACGCGCTCCTCCAC GAGCAGGACCAGTGCGCGCAGACGGCGGCCGCGCTCGCCACGGCCGCCGCCGTCGAGGCC TCGGCCCCCACCGCCGACCTCGCTTCCTACATCCACAAGCTCCAACCCCGCCTCCTCAAG CTCCTCCGCAGCAATGCCTTCAAAGCCAAGCCCGCGCTCATCTCTCTCATTGGCGTCTCT GCATCCGCGGCCGGCGCCGCTGAAGTCACCGCCTCTGTCCCGTGCCTCCGCGACACAATC GCCAGCGACGACTGGGCGGCGAGAAAGGCCGCGGCCGAGGCTCTTGCTGCATTGGCCTTA GAACATAAGGATCTTCTCGTCAGCTACAAATCTTCTTGCATCACCATGTTCGAGGCCAGG AGGTTTGACAAGGTCAAGATTGTGCGAGATTCGATGAACAGGATGATCGAGGCATGGAAG GAGATCCCGGATGTTGAAGAGGACGAATGCTCCTCCGGTGCGCCACCGGCATCGCACTCT CAACGACGATCTTCTCTTGCAGGGAGTGCAAGTGATGGGCGATATCCGGTTGCATCGTCG ACCAGGAGGAATAGTCTACCTGCAAGCAGGTCGCCTCCTCCTGATGCCTCACCCAGTGTC AACAAAAGGCATAGCTCTTCATCAGCTAGAAACAAGAAGCAATCACCTCCTTCATATCGC AAGGCGGGCCAAGCGAAGAACCGTGATTACAAGGTTGACATTGCTGTTACACCAGATGCC ACCCCAATCAAAGTGGTGACAGAGGAGAAGCTTCTGAAAGGAGGCAATGTGAGATCAAGA TTGGAAGCAAGGAGGATGCTTTTCCAGGATGGCGATGACAGGGCGACCAAGGTGGCTGGA CTGAAAGCAGGATCACGAGTCGTTCCATATGAGGAGGGTGGTAACATGGAAGAAATTTCT GAGATTGGTGGCGGATCAGAGAGGTTTCAGACAGGTTACAAAGACGAGGGATTGTCAGAG ATTCGGTCACAACTGCTTCAGATTGAAAATCAGCAGAGCAGTTTACTAGATCTTATCCAG AAATTTATGGGGAAATCTGAGAATGGCATGAATTCTTTGGAGACAAGGGTACATGGACTT GAGATGGCATTGGATGAAATCTCCCGAGATTTAGCTGCCTCGTCAGGAAGGACATCAAAC AGCGAAGCTCATGTCAACTCATGCTGCATTCTGAACCCAAAATTCTGGAGGCGTCATGAT GCTAGTAGATACTCTTCTAGTTTTTCTGTCTCTGATGGTCGAAACAGTTCGGAGGGGAGC AGAACTTCTTACAAGTGGGGAAGGCAAAAGTTTGGAGTTCAGGGTGGTTTTGTCACCAAC CCGTTAGCTGAGCCGAACATTTCGTCTGCTGCGAGAACAGCGACTGCTCAGGAAGGCAGA AGAAAGGATTTGACTTTACCAAAGTCAAGGATGGGCTAG

Peptide Sequence

PEP ID	Os02t0739900-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:30930149:30934255:-1 gene:Os02g0739900 transcript:Os02t0739900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to microtubule-associated protein TORTIFOLIA1. (Os02t0739900-01)
Sequence	MGTAGRARGGEPLKLRVNRCLLKLSDRDTEAMAAAELEAIARALAADELGAFVSAVSDAR PTDKTPLRRHALRALALVAAAHPRDAVAPLVPRILAAALRRVRDQDSSVRAALVDTARAA AAASASASPALRPLTDALLHEQDQCAQTAAALATAAAVEASAPTADLASYIHKLQPRLLK LLRSNAFKAKPALISLIGVSASAAGAAEVTASVPCLRDTIASDDWAARKAAAEALAALAL EHKDLLVSYKSSCITMFEARRFDKVKIVRDSMNRMIEAWKEIPDVEEDECSSGAPPASHS QRRSSLAGSASDGRYPVASSTRRNSLPASRSPPPDASPSVNKRHSSSSARNKKQSPPSYR KAGQAKNRDYKVDIAVTPDATPIKVVTEEKLLKGGNVRSRLEARRMLFQDGDDRATKVAG LKAGSRVVPYEEGGNMEEISEIGGGSERFQTGYKDEGLSEIRSQLLQIENQQSSLLDLIQ KFMGKSENGMNSLETRVHGLEMALDEISRDLAASSGRTSNSEAHVNSCCILNPKFWRRHD ASRYSSSFSVSDGRNSSEGSRTSYKWGRQKFGVQGGFVTNPLAEPNISSAARTATAQEGR RKDLTLPKSRMG

Transcript Sequence

Transcript ID	Os02t0739900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:30930149:30934255:-1 gene:Os02g0739900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to microtubule-associated protein TORTIFOLIA1. (Os02t0739900-01)
Sequence	ATGCCACTCCACGCCGCGACCCGCTAACTCCTCCCAGCCCACGCCGCCAATATCTTGGCG TCGCGTCGCGTCTCGTCTCGCCAAGCCAGAGTAGGCGCACCGCAGCGAGAGGGCCATGGG CACGGCGGGGCGGGCGCGCGGCGGCGAGCCGCTGAAGCTGCGGGTGAACAGGTGCCTCCT CAAGCTGTCGGACCGCGACACGGAGGCCATGGCGGCCGCGGAGCTGGAGGCCATCGCGCG GGCGCTGGCCGCGGACGAGCTCGGGGCGTTCGTCTCGGCGGTGTCCGACGCGCGCCCCAC CGACAAGACCCCGCTCCGCCGCCACGCGCTGCGGGCGCTCGCGCTCGTCGCCGCGGCGCA CCCGCGCGACGCCGTGGCGCCGCTCGTCCCGCGCATCCTCGCCGCCGCACTCCGCCGCGT CCGGGACCAGGACTCCTCCGTGCGCGCCGCGCTCGTCGACACCGCGCGCGCGGCGGCGGC CGCGTCCGCCTCCGCCTCCCCGGCGCTCCGACCCCTCACCGACGCGCTCCTCCACGAGCA GGACCAGTGCGCGCAGACGGCGGCCGCGCTCGCCACGGCCGCCGCCGTCGAGGCCTCGGC CCCCACCGCCGACCTCGCTTCCTACATCCACAAGCTCCAACCCCGCCTCCTCAAGCTCCT CCGCAGCAATGCCTTCAAAGCCAAGCCCGCGCTCATCTCTCTCATTGGCGTCTCTGCATC CGCGGCCGGCGCCGCTGAAGTCACCGCCTCTGTCCCGTGCCTCCGCGACACAATCGCCAG CGACGACTGGGCGGCGAGAAAGGCCGCGGCCGAGGCTCTTGCTGCATTGGCCTTAGAACA TAAGGATCTTCTCGTCAGCTACAAATCTTCTTGCATCACCATGTTCGAGGCCAGGAGGTT TGACAAGGTCAAGATTGTGCGAGATTCGATGAACAGGATGATCGAGGCATGGAAGGAGAT CCCGGATGTTGAAGAGGACGAATGCTCCTCCGGTGCGCCACCGGCATCGCACTCTCAACG ACGATCTTCTCTTGCAGGGAGTGCAAGTGATGGGCGATATCCGGTTGCATCGTCGACCAG GAGGAATAGTCTACCTGCAAGCAGGTCGCCTCCTCCTGATGCCTCACCCAGTGTCAACAA AAGGCATAGCTCTTCATCAGCTAGAAACAAGAAGCAATCACCTCCTTCATATCGCAAGGC GGGCCAAGCGAAGAACCGTGATTACAAGGTTGACATTGCTGTTACACCAGATGCCACCCC AATCAAAGTGGTGACAGAGGAGAAGCTTCTGAAAGGAGGCAATGTGAGATCAAGATTGGA AGCAAGGAGGATGCTTTTCCAGGATGGCGATGACAGGGCGACCAAGGTGGCTGGACTGAA AGCAGGATCACGAGTCGTTCCATATGAGGAGGGTGGTAACATGGAAGAAATTTCTGAGAT TGGTGGCGGATCAGAGAGGTTTCAGACAGGTTACAAAGACGAGGGATTGTCAGAGATTCG GTCACAACTGCTTCAGATTGAAAATCAGCAGAGCAGTTTACTAGATCTTATCCAGAAATT TATGGGGAAATCTGAGAATGGCATGAATTCTTTGGAGACAAGGGTACATGGACTTGAGAT GGCATTGGATGAAATCTCCCGAGATTTAGCTGCCTCGTCAGGAAGGACATCAAACAGCGA AGCTCATGTCAACTCATGCTGCATTCTGAACCCAAAATTCTGGAGGCGTCATGATGCTAG TAGATACTCTTCTAGTTTTTCTGTCTCTGATGGTCGAAACAGTTCGGAGGGGAGCAGAAC TTCTTACAAGTGGGGAAGGCAAAAGTTTGGAGTTCAGGGTGGTTTTGTCACCAACCCGTT AGCTGAGCCGAACATTTCGTCTGCTGCGAGAACAGCGACTGCTCAGGAAGGCAGAAGAAA GGATTTGACTTTACCAAAGTCAAGGATGGGCTAGGCACGACAAAGACATTTTCTTTGATG TGTGAGCTGCTCAAGTTAGAACATACATAAGCATGAAGGTAGCAACATTTTCTCTCTTTC TCTGAGACTTCCTGAGGGTTTTTTTTCCTTTGTTGGAGCCGGAACTGAAAGCGCGTGGTG TGCATGGATCATGGTGTTCTACGGGAGTCACTGCACTATTGCAAAGCATAGTCACTGCAG TATTGCAAAGCATAGATCCTGAGGTAGAACTCGTTTCTTGAGCTGGATCCTCACTAATTA TCAGGGATTCGGATTATACAGCCTCACCGAGAAATGGAGAATGAGGATACAGTAACCGTG TTCATGAAACCCTGCTGGTGGAGTTGGGCTTGACAATTGGCCATTATCTTTTGTCCCGCG CAGCCGTGGTACTTCAGAACTGTTTTATTTTTTTTCCGTTTATAAGAATGTAGGCACAAC GTGTTTCTGTACGAAGCTATGAATGTATCCTGTAAATAGTTTGGATAAAACAGCTTCTGT GCTCGTGAGTTTTCTTTGCCTTCTTTCTGAACTCTGAAGGTGTTGACAACTTGACATAAC GGCATTACTGCCCGAGTGATTTCAGT