Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0739400-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:30899582:30901300:-1 gene:Os02g0739400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Avr9/Cf-9 rapidly elicited protein 231 precursor. (Os02t0739400-01)
Sequence	ATGGGGGGCAATCCGGCGATGCGGGCCGGATTGGCGTTGGTGGTGGTGGTGGTGGCGGTG GTGGTGGGGGATGTGGGCGCGGCGTTGCCGAGGTTCGCGGAGGCGCCGGAGTACAGGAAC GGGGAGGGGTGCCCGGCGGCGGTGGCGGGGGCGGGGGTGTGCGACCCGGGGCTGGTCCAC ATCGCGATGACGCTCGACGCGCACTACCTGAGGGGGTCCATGGCGGCCATCTACTCGCTG CTCAAGCACGCGTCGTGCCCGGAGTCGATATTCTTCCACTTCCTGGCGGCGGCGGACGGC GGCGAGGGGTGCGGGGGTGGGGTCGGGGAGCTGAGGACCGCCGTGGCGGCGTCGTTCCCG TCGCTTCGGTTCGAGATCTACCCGTTCCGCGCTGACGCGGTCACCGGGCTCATCTCGGCG TCCGTGCGCGCCGCTCTCGAGGCGCCGCTCAACTACGCCAGGAACTACCTCGCCGACCTG CTCCCCAAGTGCGTCCCGCGGGCGATATACCTCGACTCCGACGTGCTCGCCGTCGACGAC GTGAGGCGCCTCTGGGAGACGCGCCTGCCCGCCGCCGCCGTCGTGGCCGCGCCCGAGTAC TGCCACGCCAACTTCTCCCGCTACTTCACCGAGACCTTCTGGTCCGACCCGCAGCTCGGC GACCGCGTCTTCGCCGGGCGACGCCGCGCGCCCTGCTACTTCAACACCGGCGTCATGGTC ATCGACCTCCGGCGGTGGCGCGTCGGCAACTACCGTCGCCGCATCGAGGTGTGGATGGAG CTGCAGAAGGAGAAGCGAATCTACGAGCTAGGGTCGCTGCCCCCGTTCTTGCTGGTGTTC GCCGGCGAGGTGGAGGCCGTCGACCACCGCTGGAACCAGCACGGATTGGGCGGCGACAAC GTCCTCGGCAGCTGCCGCCCTCTCCACAAGGGCCCTGTCAGCCTCATGCACTGGTCCGGG AAGGGCAAGCCATGGGACCGGCTCGACGCCGGCAAGCCTTGCCCGCTCGACCACACTTGG AAATCATACGACCTCTACATTGCAGAGGGTGATTCATCTTCAGCATCAGCACCGTTCGCA TTGTCATCATCGGCATTGCCTGCGGCGGCATTTTCTTGGTAG

Peptide Sequence

PEP ID	Os02t0739400-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:30899582:30901300:-1 gene:Os02g0739400 transcript:Os02t0739400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Avr9/Cf-9 rapidly elicited protein 231 precursor. (Os02t0739400-01)
Sequence	MGGNPAMRAGLALVVVVVAVVVGDVGAALPRFAEAPEYRNGEGCPAAVAGAGVCDPGLVH IAMTLDAHYLRGSMAAIYSLLKHASCPESIFFHFLAAADGGEGCGGGVGELRTAVAASFP SLRFEIYPFRADAVTGLISASVRAALEAPLNYARNYLADLLPKCVPRAIYLDSDVLAVDD VRRLWETRLPAAAVVAAPEYCHANFSRYFTETFWSDPQLGDRVFAGRRRAPCYFNTGVMV IDLRRWRVGNYRRRIEVWMELQKEKRIYELGSLPPFLLVFAGEVEAVDHRWNQHGLGGDN VLGSCRPLHKGPVSLMHWSGKGKPWDRLDAGKPCPLDHTWKSYDLYIAEGDSSSASAPFA LSSSALPAAAFSW

Transcript Sequence

Transcript ID	Os02t0739400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:30899582:30901300:-1 gene:Os02g0739400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Avr9/Cf-9 rapidly elicited protein 231 precursor. (Os02t0739400-01)
Sequence	GGCGGATTCGATCGCCTCCGCCCTCGCCCTCGCCTCGCCTCCGCCTCGCTCGCCACCCAC CCCCGCACATACAAGCGCGACGAGGAAGAAGGGGACGCCGACCTCCAAGAACCCACCCCA ACCCCCCCGAGGGTGGGAGGAGGAGGAGGGAATCGAGGCCGGAGGCGCCGGATATGGGGG GCAATCCGGCGATGCGGGCCGGATTGGCGTTGGTGGTGGTGGTGGTGGCGGTGGTGGTGG GGGATGTGGGCGCGGCGTTGCCGAGGTTCGCGGAGGCGCCGGAGTACAGGAACGGGGAGG GGTGCCCGGCGGCGGTGGCGGGGGCGGGGGTGTGCGACCCGGGGCTGGTCCACATCGCGA TGACGCTCGACGCGCACTACCTGAGGGGGTCCATGGCGGCCATCTACTCGCTGCTCAAGC ACGCGTCGTGCCCGGAGTCGATATTCTTCCACTTCCTGGCGGCGGCGGACGGCGGCGAGG GGTGCGGGGGTGGGGTCGGGGAGCTGAGGACCGCCGTGGCGGCGTCGTTCCCGTCGCTTC GGTTCGAGATCTACCCGTTCCGCGCTGACGCGGTCACCGGGCTCATCTCGGCGTCCGTGC GCGCCGCTCTCGAGGCGCCGCTCAACTACGCCAGGAACTACCTCGCCGACCTGCTCCCCA AGTGCGTCCCGCGGGCGATATACCTCGACTCCGACGTGCTCGCCGTCGACGACGTGAGGC GCCTCTGGGAGACGCGCCTGCCCGCCGCCGCCGTCGTGGCCGCGCCCGAGTACTGCCACG CCAACTTCTCCCGCTACTTCACCGAGACCTTCTGGTCCGACCCGCAGCTCGGCGACCGCG TCTTCGCCGGGCGACGCCGCGCGCCCTGCTACTTCAACACCGGCGTCATGGTCATCGACC TCCGGCGGTGGCGCGTCGGCAACTACCGTCGCCGCATCGAGGTGTGGATGGAGCTGCAGA AGGAGAAGCGAATCTACGAGCTAGGGTCGCTGCCCCCGTTCTTGCTGGTGTTCGCCGGCG AGGTGGAGGCCGTCGACCACCGCTGGAACCAGCACGGATTGGGCGGCGACAACGTCCTCG GCAGCTGCCGCCCTCTCCACAAGGGCCCTGTCAGCCTCATGCACTGGTCCGGGAAGGGCA AGCCATGGGACCGGCTCGACGCCGGCAAGCCTTGCCCGCTCGACCACACTTGGAAATCAT ACGACCTCTACATTGCAGAGGGTGATTCATCTTCAGCATCAGCACCGTTCGCATTGTCAT CATCGGCATTGCCTGCGGCGGCATTTTCTTGGTAGACAGCTAATGAGTATACACAATAAT TCTTTCATTGAGGTTGCCTTGTGGAGCTGTGTGTGGTGATGGAATTGCTTTGCAATTCAT TGCCACAGCCATCACAGCTGCCACCACAAGCCAGCTGCCGCCTTCGGCTGTACAGGACAG TGAAGGGGAGGGGCGGCACACTGCGGTGGCGCACAAAGGGAAGATGGAGAATAGAGGAAG CAAATTCTTGTTCATTTGTGGTACAATTCAGATTGATTCGTTAGGCTTCGGTTTGGAGGT GGCTGACTTTGGGGGGATGGAATTACTTGATTGGTGGTGTACAATTCTTGGATAGGATAA AGGTTTCATTTTTTTGTCTATTAGTTCAGAATCCACATGTTTGTTCGCTGAACTCGCATA ATATTGATTGAATTGATTTGAATCAAAATGAGTTGATCC